MSTRG.14909.1.p1 (mRNA) -

Overview
NameMSTRG.14909.1.p1
Unique NameMSTRG.14909.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000127_pilon:869690..872528+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14909.1.p1 ID=MSTRG.14909.1.p1|Name=MSTRG.14909.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2839bp|location=Sequence derived from alignment at sc0000127_pilon:869690..872528+ (Clytia hemisphaerica_ch_hm2_pilon)
ActatcaaaacaataacaaaaagcaGTCAAAAGcgaaagcagattttttc
attcaaCATTCAATATTCATAAGGTTCTCAAGAGCAACAAGCTACAGTTT
CAATTCAATTTCAGAATCATGTGTGCCATGAAAGAAGATGGGATAAGTCC
TTTGCAAGTGgtaaaatatactttttgttctttcttttagATTTAGTACT
ATAAGTTGTTGTTGCTTTTCAGATACCAATGTCCTCTATTTTCGTGGCCA
AAATTCCGATCTTTCtacaaaattgatttcattTATAAAAGTTTCATTTG
ATTGGTGAGTTTGTTTTAAGACATCATCTCTGAGAAATTCATTCAGGGTT
TTGTGCCACGTGGTTGACTGAAAAAGATGATGGTATCTGaaataccgtaa
cttggtctcaTGTCACGAGGCCTCATCATCCCACGAgtgatgtcgatatt
agacaaACTTATGCTACGGTAGCACCATTATTATGGCTGTCTCAAAGCAG
GCCACCGTGCTAATGGTGATGGAAGCACTCAACAACACAAATGTCCAGTG
TAGATTGAGAAAACTTTTTACCATCAAACACCAAACCAGCAGGTCGTGAA
TGAACCAGTCAGGTGCGTCCAACGGGCGCAAAAACACTAAGTTTTTCAGA
TGTAAAGAATTTGCATACTGTAATTTAACGCCAGTCTAACACCAGATAGT
TTGGTCCTACGTAATTCAATAATCCTTTTCAGCAACTGaaaaaaaCACCA
GACAGCCCACAGTCAACAGTGTGTCCACAACGTTGTTCTCAAAGTTAACA
CATTTTTTACACTCAGTCATCATGactcatttttgttgtttcaacccttt
cagtctcaaagttttCACAGCTAGTTTCTCTGAGCACAgactttcttttt
gaaaaaaggaaagTAAAAGCACTAATACCACAACCGAAATGTAAAAATAG
GACCCGTGGCACCAAAAATTATCATAAGATTACGCCAGACATAACTGTCC
AGTGATTCTCCGATGTTACATTACAGGAATTCTTGACACTACTATGtgaa
aaaagaagttttaacACAGGACATATATTCTAGTTTATGAACAGGGGAAT
TTTCCATTACTGTACTGCAATTTTGTGTGAACTTTCAGTCTGTTCCAAGT
TTCCCCAAAACTTTGTTCtatttttttaacagttttatCTAAACACTGGG
ATCtcaattttattttgtccaATCACATATTATCAGACAGGActaaaaaa
actgaaacaaaagaattttgtacaatgtgtttgcatttttgtttttatag
tttGGTCATGTTGGACCAAGGTTGATACCATTTTTGAAGACAGTCATCAT
TTACTTTGTGGCCTGGATTCCTGATGAATACCCAAGCATCTTTGCAGCAC
TTTTGAAATGTCTGCCTATTTTATGTTTGATATTATTTGTTGGTTTACAA
GGAATCAGTTTGGAAGAAAAACATGATTATCAAAGGCGTATTTTTATTGG
GTTGGTATTCTCATGTATTGGGGATGCTTTATTAATCTGGCCTGACCCAC
ATTTTGTTACAGCAATGGTTTCATTTGCTATTGCTCACATCTCATACATC
CGTGCCTTTGGATTCACACACTTCAGATGGCCCAAAGCTGTTCCTTTCTA
CATTGCATTACCATTTGTCTGCTACTGGTTCTATCCAGGGCTTCAAGGAA
TTTTGATTCCTGGTGTTTTTATTTACATCACAATCATCACATCAATGGGA
TGGAGAGCTTTTGCTTCTGTTGATATTATGGAAAATATTTGGACATGGAA
TAAACTTTGTGGTGTAATTGGAGCTACGTCATTCATCATTTCAGATTTGG
TGATAGGTATCAACAAGTTTGTTGCACCACTTTATTTGGCAAAACCTATC
ATTATGGTGACCTATTATTTTGCGCAACTCTTCTTTGCTTTGTCAGCAGT
TCAAAACAGCAATGTTTTGATCAAGTTACGtgtttcaaacaaaaaagtaa
actGATTAATCGATTTATGCAAGATTTGAACACTTGTTCACCTAACATGG
GCTAAATGATAGATGCTCCGAGAACTGGATTAAAGATAAACAATATATTA
AACATAACAGTAATGTATAGCGTGCTTAACTGTAAAAgcactttatataa
aaatgacCTTTTATTTGCAGCAATGCCATTACATCATTattaatttcaaa
aagtatattttGAGTAAAAAGAAAGCAAAGTATTGTAAAGTATGTTATAA
ATTTATGTTACTTTTAGTGTAAACAAACTTATTGTTTTAGAGTGTAAACA
TGTGAAATGTTTAGTTTTTAGTCCTTTGTATTGCTTTGTATTTATTGTAT
ATGTTTATTAAAACCATTAAATTTTATAGATTATCACCAGTAAGCTTAAT
CAAAAGTCAAACCTTTTCATTTCAGTTGTAGTTCCTGTTTTTATTGCACA
CCTGATATATAAGTGcatattttccatttttgagttaaattctttgaatt
ttttatatttacaaaatttacagcTAGTGTACACACTCTTAAATTGTAAA
GGAAAATTTAAGATATATTGATTACAGGGTAGAATcataaattaaaataa
tttcttaTATAGGTGTGTTAGAGAAAATATGCCTTAGGTTGTCAATTAGA
TATAGCCTTTCCTagacatttttcatattttcattttattttttaaataa
tatatacagtaaaaagcaaaagtttatttttttataaaggatttaaaGCA
ACTGTAAAAGTATCTACTATATATATTATTAAACACTATAATCGAAAAAT
TATTCTATAGTGTCTCTGATGATCTTTGTGTCTGTTGTg

Coding sequence (CDS) from alignment at sc0000127_pilon:869690..872528+

>MSTRG.14909.1.p1 ID=MSTRG.14909.1.p1|Name=MSTRG.14909.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1494bp|location=Sequence derived from alignment at sc0000127_pilon:869690..872528+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTGCCATGAAAGAAGATGGGATAAGTCCTTTGCAAGTGtttGGTCA
TGTTGGACCAAGGTTGATACCATTTTTGAAGACAGTCATCATTTACTTTG
TGGCCTGGATTCCTGATGAATACCCAAGCATCTTTGCAGCACTTTTGAAA
TGTCTGCCTATTTTATGTTTGATATTATTTGTTGGTTTACAAGGAATCAG
TTTGGAAGAAAAACATGATTATCAAAGGCGTATTTTTATTGGGTTGGTAT
TCTCATGTATTGGGGATGCTTTATTAATCTGGCCTGACCCACATTTTGTT
ACAGCAATGGTTTCATTTGCTATTGCTCACATCTCATACATCCGTGCCTT
TGGATTCACACACTTCAGATGGCCCAAAGCTGTTCCTTTCTACATTGCAT
TACCATTTGTCTGCTACTGGTTCTATCCAGGGCTTCAAGGAATTTTGATT
CCTGGTGTTTTTATTTACATCACAATCATCACATCAATGGGATGGAGAGC
TTTTGCTTCTGTTGATATTATGGAAAATATTTGGACATGGAATAAACTTT
GTGGTGTAATTGGAGCTACGTCATTCATCATTTCAGATTTGGTGATAGGT
ATCAACAAGTTTGTTGCACCACTTTATTTGGCAAAACCTATCATTATGGT
GACCTATTATTTTGCGCAACTCTTCTTTGCTTTGTCAGCAGTTCAAAACA
GCAATGTTTTGATCAAGTTACGtgtttcaaacaaaaaagtaaactGAATG
TGTGCCATGAAAGAAGATGGGATAAGTCCTTTGCAAGTGtttGGTCATGT
TGGACCAAGGTTGATACCATTTTTGAAGACAGTCATCATTTACTTTGTGG
CCTGGATTCCTGATGAATACCCAAGCATCTTTGCAGCACTTTTGAAATGT
CTGCCTATTTTATGTTTGATATTATTTGTTGGTTTACAAGGAATCAGTTT
GGAAGAAAAACATGATTATCAAAGGCGTATTTTTATTGGGTTGGTATTCT
CATGTATTGGGGATGCTTTATTAATCTGGCCTGACCCACATTTTGTTACA
GCAATGGTTTCATTTGCTATTGCTCACATCTCATACATCCGTGCCTTTGG
ATTCACACACTTCAGATGGCCCAAAGCTGTTCCTTTCTACATTGCATTAC
CATTTGTCTGCTACTGGTTCTATCCAGGGCTTCAAGGAATTTTGATTCCT
GGTGTTTTTATTTACATCACAATCATCACATCAATGGGATGGAGAGCTTT
TGCTTCTGTTGATATTATGGAAAATATTTGGACATGGAATAAACTTTGTG
GTGTAATTGGAGCTACGTCATTCATCATTTCAGATTTGGTGATAGGTATC
AACAAGTTTGTTGCACCACTTTATTTGGCAAAACCTATCATTATGGTGAC
CTATTATTTTGCGCAACTCTTCTTTGCTTTGTCAGCAGTTCAAAACAGCA
ATGTTTTGATCAAGTTACGtgtttcaaacaaaaaagtaaactGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14909MSTRG.14909Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14909.1.p1.exon1MSTRG.14909.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14909.1.p1.exon2MSTRG.14909.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14909.1.p1MSTRG.14909.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127_pilongenomesc0000127_pilon:869690..872528 +