|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000127_pilon:641285..646115+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14903.1.p1 ID=MSTRG.14903.1.p1|Name=MSTRG.14903.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4831bp|location=Sequence derived from alignment at sc0000127_pilon:641285..646115+ (Clytia hemisphaerica_ch_hm2_pilon)
TAGTGTGCCAGCAGGGGTTAATAACTTCCAATATCTCATTTTACAGGCCA
CGATCCTAAAAATGTTGATATCGTTAATCCAATGGGTTGTTTTATTGGTG
GCACAGATGTCTTGATGAAAGATGGTTCTTCAAAAGCAATCGAGTCTTTA
ACTGTTGGTGACAAAATTGCTTGTGCAAAGGGCAAAGTTGGGATCATCTC
GACTGAAAGAGTTCAGCATAAGCATGATACCAGATACCGTGTGTACGGCT
TCAACGATGAGGAACCATTCTTTCTTGGAGTTCATCCCTTCTGGACCCAA
CATGGTTGGAAATCAATGTTCCCTGTTCAGTCAAAAGGCGAGAATCCTTC
ACTACATTGCGGTCAGTTAGAGGTTGGTGATTTTGTGTTGAGAGCTGTTT
CTGAGTCGTCAAACCCTAAATATAAATGGGTTGAAATTAAGAAGATCCAT
TACCAATCTGCATCATCGAAAGAAAAAGTATACGGTGTTCACACTGTAAG
TGGAAGCAAAAGTTACCATGCCAACGGTTATGTCGTTTGTGAAAATTACC
CACAAATCACTTTGGCTTCAACAAGGTGTGGCAAATCTTGATCAAGAAGG
GAAAGATGAAATGTTAAAGTTGAGACCAACTTTAGTGAAAATCTTTGGTG
ATGGAATGTCAGATGTGATCATGAAGAGTTTGAAGGAGACAAAACTGAAT
CGAGGGAAaccgaaaaagaaaatgacttcATTACTTGGAGATCGATCATT
CGAAATGAAGTTTGTATCAAACAGCAATGATGATTTTAAACCTGTTCCAC
AACACATGTCGTATCATCAAGGTGAACTCTTCATCGATGGAAACCACATA
TCAAATGCTGAAGTTTATCAAAACAAGAAGATAGTTTGGTCAAAACGTGA
TGATGGTGGACGTTGGTACCATGGTGTATTTACAATCCGAAACAAGGGTG
TTACCGGTAAATGTATCTTGATAAAGTCTAAAGATTTCAATTGTAAGCAG
ATTATATCGAGTACGGAATTGGAAGTAAAAATGGTTCGAAATGATTATGT
TATgaaaaagagtgtagaagagatccccaaggatgaagatgaagacaaag
atggaaggaagaagatgaaaaaatcaacgaaaaatgaagGTACATATTAT
TCTTATAAGCAACCAGCCCTGAAATTAGCAAtttttcactatctcgtaaa
gtaaaagctttttagataatctaaccatggcaaacagataaagcagccgg
cgagacgacctttttttccgatgtgttctaaGAGCATATtttagctagaa
attttgatctgttctgattagatCTTCGAaataatcagctagaaataatg
atgtgttctgacGaGACAGGGGTACAGTCAAGGTCAtttaacgtgttctt
gttgtctaggtaacccaagaaagcttcagaacacatcttttaaggagaca
gaggtataaaaaaaaaatttaaaatttccacctgtcggaaaaaagaccaa
atatatggtttacaaaaataaaaatatctattacagtcgaaccaatgaag
atatttagattctgtttgaagattctgaaagataaaaagctgctttttaa
catatttgcagtttttgcattttccatgaagattttttcttaaaatctat
gctgaagataagtaaaattttcaaaatctgatgacctcataaatgatgac
atcattattttcaaaatttattttttaatttttcaaattcacactgtcaa
tgcctatcacgtgtcaaaatttgaaaatgattgaataAaTAGTTCAGAAG
TTaacagcactttaaaatttggaGTTTTATGctattttagctgggtttta
tgtcatgtttcacaataaagtcataaaacctgatctggacgacctatgac
cctaagaatttgcacaagtactcttaataagattttgttaaaagtcagaa
agtttcaagtcgtttaaaaaaatcttctctgagatatacacaaaagaagT
CCAGcatggtagattctaccccacCTCCTTTGGAATTTTTAGCTCCCTAG
CTGATGGAAAATAACGTTGTGTCGACGTccatctaacattatatggacaT
TATACGTAAATTATGAACGTTAGGTAGACGTATACGGATATTATGAACGT
TAAGTGGACGTTGTTTTTGACGTTTTGTGCTAGCTGGATCGTTCATTCTA
CCCCTCCCCTAGTGACCAAAAAGCTCCCGCCAGATCAGTGAGACAAAGGT
GTTTATAGTCTGGGAGCAGAATCGAGAAAAAGcaattttgcttaacccag
aaATTGAATGGGATTGTTATACATcattggaacggaaattttatgctgat
tatggaaacccggGTCTTAAAAGTTtatcatggacaaaattgcaaacgag
gctggagtttgcactcctTCGCGgtgtttttttctcgattttacctgttt
tagaaaaattctattGACTGTATTTTTACCATCTTAATGTTTAGAATTCA
TCGATTTTGGTACTATGTGCATTGCAATCCATAAAGACGAAGTTTCAAAT
GACGACATAGTGGAGGCTGGTATTCAATACCCCGGTATGAACAATGAAGA
GTTTTTTGGATCACCGGTCGGTTACGATACTGATACATTAAAATTTCACG
TTGAAATTACTATTGACAAGGATATGTTTAGTGACCCTGATGGTTTTGAT
AGAGATTATGACAGATATATCTCATTTGAAGGTAAGTGATGGGGTATAAC
ATCTCAGCTGGTACCagacgtcaaaacaacgtttatttaacgttcataaT
GTTCAAATAACGTTACATGTACGTTGTAACAACGTTGTGTCCCAGCTGGG
GAAACTACTCCATACTCCAAACTGTTGTGAAACGTAATAACAACGTCCAT
TTATTGTacatactcttgtctcccgaatagacgtccccccccccgttaat
tgttaagagacaaaaaaaatccatcccccccgctcttattaattaaattc
gaataattcaatattttattacagtgtagatagaccttaaacttgttaaa
attttcctttttgttagtattggttcttattttacgtattcatttgttaa
agtttcttttttgttgttgaaattgataccagttagaaaaaattctttct
tcaaattacccccctcttattccatccccccccccgcttattagaattta
gaaaattttcctacccccctgcttattcggacccccccccgtctattcgg
gagacaagagtaatgtTCAAATAACTTTACATGTACGTTGTAACAACGTT
TTGTGTCAGCTGGGGAAACTACTCCTTACTAAACTGTTGTAAAGCGTAAT
AACAACGTTCAGTTATCGtgcataacgtccaaataacgttattagCACGT
TGTATTAACGCTTTGTGTCAGCTCTGGAAAAGGTTTGAAGGGATGAcggg
tatgtttttttttgtttcttttttatctaTAATGGGCAGGAGCTACCGta
aaaagcacagctcaaaatcatatatttacgctgtgccgacgaatcgagat
tctattcatcgcgcaatcagcgaagacaaaagtaaccatgacgaccatcc
aagatcttggatgagcgtcatagtcgatatttttattcccgtcgttgaaa
acacaacttacaaaaagtcatcaatgctttgtaaaaagagtcagtgatag
agaatcataacataaagtctgtctattatcttgattcaattaaagtgaca
tttccataattaaaagtttagtaattactgttatacatttggggatcacg
taaaagatttctttcgaaataaactcatttcaacaacacttggaggtttc
tggggaattcgtaaatagtaaactgcatactgatacactctgctagacat
taatatggtagtatttgctcttcatctttgattttttctacagtgattag
attgacacatgcgcgataaaatttctaatatttgtcttcagaggttacta
ctttctttgaaaacctaacctctgatactcagggtaggtaGGAGCTTCAA
TTATAACCTGATGTCAACCCCCTACACACTGTGATAATTTTCTCCGTTTC
GTTACTTGAGAATTcagtcgacgctctctaattcgacgctctctaattcg
acgctctactattcgataggctcccttattcgatgaaatttaaaatccCT
GTCAGCAAGAAATCCTCATAAACGactctcccttattcgatgaaaatccg
atcCCCTTgcagatcgaattagagagcgtcaactgtatttgatTAAAACC
ATTGACGGTTATCCAAAGCAAATTGAACGGAATTTTATgagatctttttt
ttattacaaacaTACAGGCTATGTTGACATGATGAGCCAAAAAGTAGATG
GTGTTTGCTATGTTTACGACCCGGCTTGTCCTGATAATGAAGGCGCCAAA
TATAAATGGGATGGAGAATTAACACATTCTGACATGTTCTCACGAaatgc
tgacaaagcaaaaaaaatggcaTGCTTGCGTTACATCCATACTGATCCAG
ATGAGGATTTTCATCATATGCAGTTGAACAAGAAAGATGATGTGAATTCt
ccatcaaaaaaatacgtTTCCCATGGTGCATTGCAGTATACAGAAGCGTA
TTACGATGGTGAGTTAAGTACTCAAAATCTAGAATATGCAAATTTCCCAG
ATTCAGACGCAGCCAATAGTATCCTGATGGATTTGGTTTCAATGTGTGTA
ACGCATGATATTGATGGCGATTTGAGAACGACGAATATACTGGGAACAGC
TGATCCTGACTTCATCGGTTTTAGTGAGGTG Coding sequence (CDS) from alignment at sc0000127_pilon:641285..646115+ >MSTRG.14903.1.p1 ID=MSTRG.14903.1.p1|Name=MSTRG.14903.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3969bp|location=Sequence derived from alignment at sc0000127_pilon:641285..646115+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCAACGGTTATGTCGTTTGTGAAAATTACCCACAAATCACTTTGGCT
TCAACAAGGTGTGGCAAATCTTGATCAAGAAGGGAAAGATGAAATGTTAA
AGTTGAGACCAACTTTAGTGAAAATCTTTGGTGATGGAATGTCAGATGTG
ATCATGAAGAGTTTGAAGGAGACAAAACTGAATCGAGGGAAaccgaaaaa
gaaaatgacttcATTACTTGGAGATCGATCATTCGAAATGAAGTTTGTAT
CAAACAGCAATGATGATTTTAAACCTGTTCCACAACACATGTCGTATCAT
CAAGGTGAACTCTTCATCGATGGAAACCACATATCAAATGCTGAAGTTTA
TCAAAACAAGAAGATAGTTTGGTCAAAACGTGATGATGGTGGACGTTGGT
ACCATGGTGTATTTACAATCCGAAACAAGGGTGTTACCGGTAAATGTATC
TTGATAAAGTCTAAAGATTTCAATTGTAAGCAGATTATATCGAGTACGGA
ATTGGAAGTAAAAATGGTTCGAAATGATTATGTTATgaaaaagagtgtag
aagagatccccaaggatgaagatgaagacaaagatggaaggaagaagatg
aaaaaatcaacgaaaaatgaagAATTCATCGATTTTGGTACTATGTGCAT
TGCAATCCATAAAGACGAAGTTTCAAATGACGACATAGTGGAGGCTGGTA
TTCAATACCCCGGTATGAACAATGAAGAGTTTTTTGGATCACCGGTCGGT
TACGATACTGATACATTAAAATTTCACGTTGAAATTACTATTGACAAGGA
TATGTTTAGTGACCCTGATGGTTTTGATAGAGATTATGACAGATATATCT
CATTTGAAGGCTATGTTGACATGATGAGCCAAAAAGTAGATGGTGTTTGC
TATGTTTACGACCCGGCTTGTCCTGATAATGAAGGCGCCAAATATAAATG
GGATGGAGAATTAACACATTCTGACATGTTCTCACGAaatgctgacaaag
caaaaaaaatggcaTGCTTGCGTTACATCCATACTGATCCAGATGAGGAT
TTTCATCATATGCAGTTGAACAAGAAAGATGATGTGAATTCtccatcaaa
aaaatacgtTTCCCATGGTGCATTGCAGTATACAGAAGCGTATTACGATG
GTGAGTTAAGTACTCAAAATCTAGAATATGCAAATTTCCCAGATTCAGAC
GCAGCCAATAGTATCCTGATGGATTTGGTTTCAATGTGTGTAACGCATGA
TATTGATGGCGATTTGAGAACGACGAATATACTGGGAACAGCTGATCCTG
ACTTCATCGGTTTTAGTGAGGTGATGCCAACGGTTATGTCGTTTGTGAAA
ATTACCCACAAATCACTTTGGCTTCAACAAGGTGTGGCAAATCTTGATCA
AGAAGGGAAAGATGAAATGTTAAAGTTGAGACCAACTTTAGTGAAAATCT
TTGGTGATGGAATGTCAGATGTGATCATGAAGAGTTTGAAGGAGACAAAA
CTGAATCGAGGGAAaccgaaaaagaaaatgacttcATTACTTGGAGATCG
ATCATTCGAAATGAAGTTTGTATCAAACAGCAATGATGATTTTAAACCTG
TTCCACAACACATGTCGTATCATCAAGGTGAACTCTTCATCGATGGAAAC
CACATATCAAATGCTGAAGTTTATCAAAACAAGAAGATAGTTTGGTCAAA
ACGTGATGATGGTGGACGTTGGTACCATGGTGTATTTACAATCCGAAACA
AGGGTGTTACCGGTAAATGTATCTTGATAAAGTCTAAAGATTTCAATTGT
AAGCAGATTATATCGAGTACGGAATTGGAAGTAAAAATGGTTCGAAATGA
TTATGTTATgaaaaagagtgtagaagagatccccaaggatgaagatgaag
acaaagatggaaggaagaagatgaaaaaatcaacgaaaaatgaagAATTC
ATCGATTTTGGTACTATGTGCATTGCAATCCATAAAGACGAAGTTTCAAA
TGACGACATAGTGGAGGCTGGTATTCAATACCCCGGTATGAACAATGAAG
AGTTTTTTGGATCACCGGTCGGTTACGATACTGATACATTAAAATTTCAC
GTTGAAATTACTATTGACAAGGATATGTTTAGTGACCCTGATGGTTTTGA
TAGAGATTATGACAGATATATCTCATTTGAAGGCTATGTTGACATGATGA
GCCAAAAAGTAGATGGTGTTTGCTATGTTTACGACCCGGCTTGTCCTGAT
AATGAAGGCGCCAAATATAAATGGGATGGAGAATTAACACATTCTGACAT
GTTCTCACGAaatgctgacaaagcaaaaaaaatggcaTGCTTGCGTTACA
TCCATACTGATCCAGATGAGGATTTTCATCATATGCAGTTGAACAAGAAA
GATGATGTGAATTCtccatcaaaaaaatacgtTTCCCATGGTGCATTGCA
GTATACAGAAGCGTATTACGATGGTGAGTTAAGTACTCAAAATCTAGAAT
ATGCAAATTTCCCAGATTCAGACGCAGCCAATAGTATCCTGATGGATTTG
GTTTCAATGTGTGTAACGCATGATATTGATGGCGATTTGAGAACGACGAA
TATACTGGGAACAGCTGATCCTGACTTCATCGGTTTTAGTGAGGTGATGC
CAACGGTTATGTCGTTTGTGAAAATTACCCACAAATCACTTTGGCTTCAA
CAAGGTGTGGCAAATCTTGATCAAGAAGGGAAAGATGAAATGTTAAAGTT
GAGACCAACTTTAGTGAAAATCTTTGGTGATGGAATGTCAGATGTGATCA
TGAAGAGTTTGAAGGAGACAAAACTGAATCGAGGGAAaccgaaaaagaaa
atgacttcATTACTTGGAGATCGATCATTCGAAATGAAGTTTGTATCAAA
CAGCAATGATGATTTTAAACCTGTTCCACAACACATGTCGTATCATCAAG
GTGAACTCTTCATCGATGGAAACCACATATCAAATGCTGAAGTTTATCAA
AACAAGAAGATAGTTTGGTCAAAACGTGATGATGGTGGACGTTGGTACCA
TGGTGTATTTACAATCCGAAACAAGGGTGTTACCGGTAAATGTATCTTGA
TAAAGTCTAAAGATTTCAATTGTAAGCAGATTATATCGAGTACGGAATTG
GAAGTAAAAATGGTTCGAAATGATTATGTTATgaaaaagagtgtagaaga
gatccccaaggatgaagatgaagacaaagatggaaggaagaagatgaaaa
aatcaacgaaaaatgaagAATTCATCGATTTTGGTACTATGTGCATTGCA
ATCCATAAAGACGAAGTTTCAAATGACGACATAGTGGAGGCTGGTATTCA
ATACCCCGGTATGAACAATGAAGAGTTTTTTGGATCACCGGTCGGTTACG
ATACTGATACATTAAAATTTCACGTTGAAATTACTATTGACAAGGATATG
TTTAGTGACCCTGATGGTTTTGATAGAGATTATGACAGATATATCTCATT
TGAAGGCTATGTTGACATGATGAGCCAAAAAGTAGATGGTGTTTGCTATG
TTTACGACCCGGCTTGTCCTGATAATGAAGGCGCCAAATATAAATGGGAT
GGAGAATTAACACATTCTGACATGTTCTCACGAaatgctgacaaagcaaa
aaaaatggcaTGCTTGCGTTACATCCATACTGATCCAGATGAGGATTTTC
ATCATATGCAGTTGAACAAGAAAGATGATGTGAATTCtccatcaaaaaaa
tacgtTTCCCATGGTGCATTGCAGTATACAGAAGCGTATTACGATGGTGA
GTTAAGTACTCAAAATCTAGAATATGCAAATTTCCCAGATTCAGACGCAG
CCAATAGTATCCTGATGGATTTGGTTTCAATGTGTGTAACGCATGATATT
GATGGCGATTTGAGAACGACGAATATACTGGGAACAGCTGATCCTGACTT
CATCGGTTTTAGTGAGGTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000127_pilon | genome | sc0000127_pilon:641285..646115 + |
|
