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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000127_pilon:389414..393000+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14888.1.p1 ID=MSTRG.14888.1.p1|Name=MSTRG.14888.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3587bp|location=Sequence derived from alignment at sc0000127_pilon:389414..393000+ (Clytia hemisphaerica_ch_hm2_pilon)
ccTGTGGCTGTGGTCCAATTTACCTGAAATTTTTTCGTTGGATTTGAAGA
AAGTATAAATtcctttctcaaaaaaatgttttttttttcttgcctAAATT
TGGAAACTTCAGCAGAATTAGAGAATAGATTTTCAAACGAAAAACCCAAA
AAGAAACGCCACGATCAGCAATTAACAGACACAGCATTTCAAGAAGTTTT
TCGATAGCATGAGGCATATAGGAGATAAAGACTTAAAGGTTTCCAAAGCT
GTGCCATTAGTTAACAACATGTTTTTCCcactttcttgaaaaaaaatttg
caaagcaGATTCAttgagattttcttttcttagaaagATTTCCTTGCAGA
GAGGTccaataaaatttgaaactgGCAGCTCCTGATACAAAATTTCTACA
GGTTGATTAAGTTTGGAGAAGTTTTGcttctttgaaatgaaagttttcat
tttcctatgaaaatttGAGGGCTTTCCTATTTTGGTAGAAACGCTTGTCT
CGAGAGGACACAAGTGTCAAGGCAGTAGCAAGAGATTGGGAATTTAGagc
agatttatccacaaaataAATAGGCTGAGACAAATCATTGTATGTTACTT
TGTTGGAGCTAATATCCCAAAaatctggaattttttttgcataaaaaatt
tcTGTAAGCTGAGATTCAgttagtttgtttacattttctgccattttgag
aaaaaaaaagaccaatcaaaaggcaGTTCGAACGTCAAATGACGTCAcat
acaaataaaaaaaattgaaaaaagttaatgatAAAATTTGTCTTACCATA
CCATAGAAAACTGACTCATACAAATTATATGGCTGAATAGCGGAAGCATT
CAGCTTTGATTTGATACCACGCACTAGTAAAAATGTTGTGAAATTcctac
caaaaatttcaaaccaaagCTTAGTTTTTAATTTCTTGGCTTCTGGAGAT
CCTTCtttttttCATGTGTAGATTCAGAAGAAACTTCAATCAAGAGGGAA
GACaatagtgaaaaaattataCGGCTAACGATTTTTGCTCAATTGTTata
accttttgaaaaaaggcCTATGTTTTGAAACGTCGGTGCCGGTTTCCATG
TCCGTCAGAAATGGTAAGCGGGTTGCGATTATTGGACGATTGTGACTCAA
GGAAGTGACGAAAACggctgtttttttttagaagacAGATTAAGAAATTC
TCTatacttagaaaaaaaaaagtttctgaaTATCTTTTTTCAGAGGTGAG
ATATTTATCTCCAAACTTCTTTTTTACGAAAATTGGGAATTGTTACCGCT
CCACGTGCGACCTTTCGGCCTCCCTactaaagagaaaatgaaaatgccat
tCGTCTTTGTTTTatgccattttcattttaaagaaaaggATTTGGTTTAA
GGGGAGACTTTTGCTGGCAATCTGCTGGTAACAAATAAAAATAGCCAGCA
ATGAAGAAAAATATCCAgcaatgaagaaaaaatatccAGCGCAATATACC
AGCAACAAAGAAGGATAGTTGGTAATTTGCTGGCAATGAAGACAATTTGT
TTACAGTTTTTACCGGCACTTTTTCCACACTTTTTCCACATGTCATCCAG
CAATTTGCTGGGCTACTATTATAACATTGCTGGCTACACCAAACAGATAA
TTGTCAATCTTCCGGCAAAAACAAAGCTGGCTAGTTCCCAGCAAGAATTT
CATGTCCTTTGAATCGCTTGTATGGTCACATATGGGCGTGGCACATTTTT
CAGCAATGTTATGTATCTGCGGCAAACTCTATAGTGCTTACTACAACCCA
CTGGGTGTCTCCCATGTTCGGCATcctctttaattttgattgaaCCATTT
TGGTAATGTGTATGAAAAACTCCCCTTACTTCTTTTCAGTAACAGTAACA
ATAGACAGGAGACAATGCCTGCAAAAGTGTTTTAAAGAGGGCTGAAATTT
CCCCTTTTACTGTAATCCTAAAAACTATCCGGCACTCGATGTGTAGataa
ttttttccaacacactaaagctctgaaggtccagaaatttttaaactcTG
GAAGGTTGGGATTACAGAATTTTGCCTGAATACACACATCAAAGGGCCAC
AATCATCCCTCTACAATACTAAATGTCTCAAAGAAAAGTCTTTCAATGAT
AGTGTCATTTTATCCaaaaacgatgtaaaagaaaacgctaaaaattaaga
agaaatatttttaactttaaaaggGGTTCTCATTTTTCGCTTTCTTATCC
TTTAGTATCCAAAAGGCTTTGGACCCACAAGCCAAAACATAATCGCCGTT
TGCGACGACAGGAACTGTCTAGTTATAACACTAAatcattctttttcatt
taggaaaccatttcatattgccaaaaactattttaaaatAATGAGTGGCT
TTTTATACAGTGTGTACATCATAAACAAAGCTGGCGGTCTTGTCTACCAA
AGAGACCATTCTATATCTGAAACAGAGATTTCTAGACAATTCAACTATCC
CACTGGTCTAGTTCTAAAAGAACTAGATGAAAAGCTGGTTGTATCTTATG
GTGAGAAAAATGGAATCAAAGTTGGACATTCATTCGTTGCTATAAATGGA
GAATATCTGAGCGGTAAATATATGCCAAATGGGGAATTGGTTCAAGATta
cttgaaaaatgaaaagaattttcctgCTAATTTAACATTTTGTAAGCCga
aattgacaacaaatgaaCGTATTATGTTAGCATCAATGTTCCATTCTCTG
TTTGCCATCTCCTGCAAATTATCACCTGTAGAAAAAAGTTCTGGTATAGA
GTTGCTGGAAACCAATTCTTTCAAATTGCATTGCTTTCAATCAATTACTG
GTGTGAAATTTCTGGTTTTAACAGATCCACGTGTTATGAATATGGAtgct
ttcttgaaaaaattatatgaaTTTTATTCAGATTATGCGCTGAAAAATCC
ATTTTATTCCCTAGAAATGCCAATTCGATGTGATTTATTTGATACCAACT
TGCAGAAACATTTGGAACAGACAGAAAAATCAATTGCTCATGGAGTAAAC
tcataaaatgatattttcatttACAAGTGCATAGATTGCTATAGTATatg
atgtaatttttcaggAGTAAGGGTTGgaaggatttttatttttggtaaaa
gttatcttaatttatttcaatctctAGACAAAATTTTAcactgaaaatga
tattgatAATAGATAAAGTAGTAGACTCTCATTTGTAAAAGTTTGGCATG
GAATTTCTAAGAAGTCTGTTTTTCAATCTTATCAGCATATACAGTTGGCG
CTCTCTAAGTCAACATTCTACTATTcaataggctcccttattcgacgaaa
tttaaagtccccgttaacaagaaactctcataaacggcgctcccttgaag
atcgaattagaaagcttCAAACTGTAGCACAATGGAAATACAATTgtaaa
tattatatattttttcatcattaatattttgttattgatccttaaaaatt
gaaaaatcaatcaCATTTATATATAAAATGGCCTCTCAACACTGTATCTA
ATCCATAAAAAGCAGAGGGGTCCAGTTCCCTAAATTC Coding sequence (CDS) from alignment at sc0000127_pilon:389414..393000+ >MSTRG.14888.1.p1 ID=MSTRG.14888.1.p1|Name=MSTRG.14888.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=666bp|location=Sequence derived from alignment at sc0000127_pilon:389414..393000+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAGTGGCTTTTTATACAGTGTGTACATCATAAACAAAGCTGGCGGTCT
TGTCTACCAAAGAGACCATTCTATATCTGAAACAGAGATTTCTAGACAAT
TCAACTATCCCACTGGTCTAGTTCTAAAAGAACTAGATGAAAAGCTGGTT
GTATCTTATGGTGAGAAAAATGGAATCAAAGTTGGACATTCATTCGTTGC
TATAAATGGAGAATATCTGAGCGGTAAATATATGCCAAATGGGGAATTGG
TTCAAGATtacttgaaaaatgaaaagaattttcctgCTAATTTAACATTT
TGTAAGCCgaaattgacaacaaatgaaCGTATTATGTTAGCATCAATGTT
CCATTCTCTGTTTGCCATCTCCTGCAAATTATCACCTGTAGAAAAAAGTT
CTGGTATAGAGTTGCTGGAAACCAATTCTTTCAAATTGCATTGCTTTCAA
TCAATTACTGGTGTGAAATTTCTGGTTTTAACAGATCCACGTGTTATGAA
TATGGAtgctttcttgaaaaaattatatgaaTTTTATTCAGATTATGCGC
TGAAAAATCCATTTTATTCCCTAGAAATGCCAATTCGATGTGATTTATTT
GATACCAACTTGCAGAAACATTTGGAACAGACAGAAAAATCAATTGCTCA
TGGAGTAAACtcataa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000127_pilon | genome | sc0000127_pilon:389414..393000 + |
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