MSTRG.14881.1.p1 (mRNA) -

Overview
NameMSTRG.14881.1.p1
Unique NameMSTRG.14881.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000127_pilon:219538..224042-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14881.1.p1 ID=MSTRG.14881.1.p1|Name=MSTRG.14881.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4505bp|location=Sequence derived from alignment at sc0000127_pilon:219538..224042- (Clytia hemisphaerica_ch_hm2_pilon)
TGAGCATTTTGAGGTAATTTCTTAAGAAAATGCATGTTTTTAAGTCTCCA
AAGCCTTAGAATGTTCTTAGAATGTTCTTAAATTTTTGGGCCTTGAAGCC
TTATGTTCTTATATAGTTTGTTCTTATAAAAAAAAACGTGTAGGAAGATA
AAATTTGAAACAACACCTTTTCATCTTTGTATTTGCTTAATCACGGGAGT
TTATTTGAACACATTTTTTACCCAGAAAATTCTTCCGTGTAAAACTTGAA
ATATTCGTGAAAAACACGAACCCAAACCTCTTCTGTGCCAGGGCACTGGG
AATGAAGTTAGTCGAAACTTCCAGTATAAATAAGGGAGGAGTACGGGGCA
AAAGTATGTCTATTTGTGAAGAAACAGAAAGCAGACGTAACCAAGACAAC
CAAAAGAAGTAATGGTAAGATAAAGAAAATTTCATCTTTGACTGGACAGC
CTTTAATGGGTCATTCCATTTTTTATCCATGCAGGGGGTGGAAGAATTTC
CAGGGGGTATAACGGAGTATTTTTTCACTTCTCTAGGAGGTCAAAGTTTA
TTCTAAAACCTCTATGGGGTAAAAGACTGATTTTAGTTTGTACATCCTTA
CTTTTAAGGTAGAAAATGAATTTTTCCAAGGGTTCTTGTGCAAATTTAGC
ATTTTTCCAGGGAGTATCCACACATTTCTAAGAATCAATCTTTTTTTGCT
ATAAAAAGGTTCGTCCACCCCCCTGTATGGAAATTTAATGGAACAGCCTA
ATAAAGGATTCGACAGTCCGTAAAAACAAGCAGGGGAAAAGGGCGTGGGT
AGCAGAAACATTTATTCCTCAAATAATCCTTCGATTTGGTAGTTTCAAAG
GTCTCATTTGTTTATTTTGTTAAGAAGATGATCCTTAATATTTCTCACCA
GTATAGATATTTTAAATTGAAAACTTTTTATGGTTAGCCATCAGCTTATT
ATTTCTCAACTAGCCGGTACCCGGCGTCGCACGCCGGTTAAGCTGTAGCT
GAACGCACTAAAAGTCCTTTGGATGTTGGTTAGAAAGGTTAGAGATTGAA
CTTTAGCCCTTCGGGCTTTAAACTCAATGGTAACGACGGCTTGAATATTT
TTATAAGAAAAAAGAAGTGAACTGATTTTTTCTTATGCTTTATATCGCCC
TTTGAATGCTGTTGTTGTCCACAAACCTTTTTATGTTTTGATTTACTTTT
GAAATATTCTTTTCTATGAAATGAAATTGTTTTGTTTTGAAAAGAATTCG
AATGTCATTAATAAATACGATCGTTAAATACATTCGAAAACATTTAAAAC
AAAAGAAGAGAGAAAAAGGCAAGTCTGGGCAGAAGTTAAAATTACTAAAT
GTAGATGGGCCTTAAATTTCAAAACAAAGGCTTAATAAAGTCTAAACCAA
GCTCTATCCGATCTTTTGCAAATGGCGCGAATCCAATAAAACAAATTTGT
GGAGCAAGAGACTAAAAGTCATAATTTTAAAACACAAACAAAGCGAAAAC
GAAAGTAGAAAACACAGACAAACACACATACAGACTACCACTATTAATAT
ATAGATGTGCCCCTACAATATGAAAATACTAGTTTTTTCGAAATAGCTTT
TCTTCTCCATTCTATGAGCTCGTTTAACGAGAACAAGATACATAAAACGA
ACCTTATTCTTTCACTACACTTTCAGGCCTTCAAATTATTCTTCATCGTG
GGAATGTCCCTGACAGCATTTGTGTTTGGTATTCCACAAAAAGGAGATGT
TAACATTGAATTCAACGAAAATGGGAGAAAGTTGACCGAGAAAGTGATTT
TCGATGACCAGAATGAAACTACGGAGTATGTGATCGAAGCAAAAGGAACG
CGGGTTTTGGTCGACCATAGAACTGTGAGTCAGCACATACAATTTTTTTA
TAACAGCCCTCCCAGCCCTTGGATTACTTATCATTCCAGCTCATTATCTG
AAAATGCTTCGGCCTCCCCTGATATTATATCATGTTTATGCTTATTGAGC
CACGGGCTATCGATTGCCATGGTTAAATTATGTAAAGCTTTTACTTTACG
AGATATTGTAAAGAAATTGGCTGATTTGAGGGCTCGAACCTTAGCAAACT
GTTTGCTCATAAAATATATGTGTACTCTTGTGGACACAAAACATAATGAG
GCCCACGCTTATTTCTTTTGAAAAATCTTAAAACATAGGACATTTTTATA
CTAAACTCTCTTCTTATTAACTCTTTGGTAGATATTTTTGAAAGCAATTT
ATTTTTCTACGTATCTTAATCACTTTTTTTGTAAGTTTTTAACAATGATA
ACAATAAATTTGGAAAGTTTTTCAACCAACCTGCATATTCGAGAGCCCTC
TCTCAGTCTCTCAGGCAAAAATACTTTTTTATCTTTCCGCTAAAACTGAA
TTTCGAAAAAAACCATAAATCCAATACTTCTTCAAAAGCCATTATAGTTT
TTCTATAGAAAAATATTGGTCATACAACCTCCACCTTCATTTTTTTTAGG
GTTTAAGTGTGATGAAGATTACGGGTGAAAAGAAATGTTTCCTAATGAAA
GATGAGTACGGAGACACCAATGCCAAGATCAGACACCGATTGAACAAAGT
AAGTTCCACTGGTCGGATAGCTTAGTCGGTAGAGCTGTCACCTTTTACAA
TCCAAGGGTTGCTGGTTCGATCACCGGCTACCGTCAACTCGGCAAATGAG
TAGCTTAGATTAAATAATCTGATCTAGGCGGTAAGTCACTGGGAGCTGAG
AGTAAGTGTGGCGCTCTATTTCAACATTCGACCTCTCTCGTGTGTATATG
GGCCCTTATGTTCTGCACACGTGCTTTAGCTGATGAAACGGTTTCAAACT
TTCTGTTTTTAAAACTTTTTGAGAAGATTTCCCCGACAAAGTAAAAATTA
CAAACATAATTAAATTAAGTCTTTGTTAGCTTTTAAGAAAAGACATTTAA
TCTATTAATCTTTTAATTCACAGCTGGGTAGGAAAGTTCCTGACGATGTG
AAAGACACTAAGAATTTCAAAGGAACTGGCTCTCTCATTCAACCAGGAAA
TATTCCTCTGACCATCCAACAATATTGTGGATCATTCCCAATCTACAGAC
TTTACGAAGAAGGACAAAATATACAGGACGAATCGAGTAAGTTGTACACG
TTGACTACACGTTTTTTTCATAAGAACATTTTTTCAGATTTAAGCCAAAA
AATGTTCTTAACATGTTCTTATTTTCGCCATTTTGTGGGTAATTTTGTGC
GTTTTTCTAACAAATCGGGTGTTTTAGAGTCCCCAAAGCCTTAAAATGTT
TTTAATTTGTTCTTAACATTTTGGCCATCGAAGCCTTATGTTCTTAATAT
AGTTTGTTCTTATAAAAAAACATGTATGGGATTTTCAAAGGAAAACCATG
CATGCCTTGTTCATAATAGCTAGTTTATGTATCGGAGGATATCGAGGGCG
ACGGTAAGTGAAATCGATGCAGCACAAAGTCAATAGTTTAATGTACGGCT
CTATATCGTCTTTGTTCGCCTAAACAGATGACGGTATTTTGGTGTTTTTA
TTGTCGTAGAGCAAAGTGGACAGCGATTTTGAAGACATTATCAACTGCTT
TATACTGTCTCCATCGATTTATGTCGAGTACATAAACACGAATAAATAAA
CACGCTGATGTTTAATGTGGCCAGTTTTTATTCCGTTAGAGGTGAACTTC
AAATTTGTTGCAAAATTACTCGAAATCCGTTAAAAATGGTGAATTATCCT
AGGGGGAGGGGTCATGTGTAACTTATCAAAAATTTAGAATAGTATCAGGT
TCTACCCAAAAATAGTAACCGTGCACCTACTTAACAGAAAATATTTTCGA
GCAGCAAAATACAAAAGGTGTTTTCATTGAATGATTACCTTTTGACTCTC
TCTCTAATTCGATGTTCGAGGGACCAAGAATTTTCTTCTGATAAGAGAAA
TATTCGAATAACGGAGAGTGTTTTCAAATGACCTTCCAGCTGAGCAGATC
AATGGTTCAGTTCGAATTAGAGAGAGTTGAGTGTAATCCAGATGACAGTG
TTGTTAACGGATACGGAATATAATGGAAAAAGCTCATAATTATTGTCATA
CTATAGAAAATTTTCAATTTTCATTTTTTAGGGCAAAAGAGGGGTTGCAA
CTACGTGACTCGATTCAGACTTGTCTGCGTGTGGACAAATACAGGTCGTC
ACTGCTATTGGAGGGCGTATGTTCTTTTGCAATGTTATGGCAAATAAACA
ACATACAAACGAGAGATGGCATTTAAAAAATCTCTGTATCTTTAAATATG
ACGAGCATTGAAATTCAGTTTTGTTTATTTTTTTGTCAATTTTCTTTCCA
TTGTCCGCCATTTCCCCGTACATTATCATAATTTCTTTATGTGCTTTACT
CCATAATATAATTGAGTCTCCATAACTGGAACACCCTAATTCATTTCAAG
TTATGGCGGAGATCGGTTTAAAAGGAATTGTTAACTCGAGAGACCAGTAA
GCTTG

Coding sequence (CDS) from alignment at sc0000127_pilon:219538..224042-

>MSTRG.14881.1.p1 ID=MSTRG.14881.1.p1|Name=MSTRG.14881.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2895bp|location=Sequence derived from alignment at sc0000127_pilon:219538..224042- (Clytia hemisphaerica_ch_hm2_pilon)
GGCAAAAGAGGGGTTGCAACTACGTGACTCGATTCAGACTTGTCTGCGTG
TGGACAAATACAGGTCGTCACTGCTATTGGAGGGCGTATGTTCTTTTGCA
ATGTTATGGCAAATAACTGGGTAGGAAAGTTCCTGACGATGTGAAAGACA
CTAAGAATTTCAAAGGAACTGGCTCTCTCATTCAACCAGGAAATATTCCT
CTGACCATCCAACAATATTGTGGATCATTCCCAATCTACAGACTTTACGA
AGAAGGACAAAATATACAGGACGAATCGAGGTTTAAGTGTGATGAAGATT
ACGGGTGAAAAGAAATGTTTCCTAATGAAAGATGAGTACGGAGACACCAA
TGCCAAGATCAGACACCGATTGAACAAAGCCTTCAAATTATTCTTCATCG
TGGGAATGTCCCTGACAGCATTTGTGTTTGGTATTCCACAAAAAGGAGAT
GTTAACATTGAATTCAACGAAAATGGGAGAAAGTTGACCGAGAAAGTGAT
TTTCGATGACCAGAATGAAACTACGGAGTATGTGATCGAAGCAAAAGGAA
CGCGGGTTTTGGTCGACCATAGAACTATGGGCAAAAGAGGGGTTGCAACT
ACGTGACTCGATTCAGACTTGTCTGCGTGTGGACAAATACAGGTCGTCAC
TGCTATTGGAGGGCGTATGTTCTTTTGCAATGTTATGGCAAATAACTGGG
TAGGAAAGTTCCTGACGATGTGAAAGACACTAAGAATTTCAAAGGAACTG
GCTCTCTCATTCAACCAGGAAATATTCCTCTGACCATCCAACAATATTGT
GGATCATTCCCAATCTACAGACTTTACGAAGAAGGACAAAATATACAGGA
CGAATCGAGGTTTAAGTGTGATGAAGATTACGGGTGAAAAGAAATGTTTC
CTAATGAAAGATGAGTACGGAGACACCAATGCCAAGATCAGACACCGATT
GAACAAAGCCTTCAAATTATTCTTCATCGTGGGAATGTCCCTGACAGCAT
TTGTGTTTGGTATTCCACAAAAAGGAGATGTTAACATTGAATTCAACGAA
AATGGGAGAAAGTTGACCGAGAAAGTGATTTTCGATGACCAGAATGAAAC
TACGGAGTATGTGATCGAAGCAAAAGGAACGCGGGTTTTGGTCGACCATA
GAACTATGGGCAAAAGAGGGGTTGCAACTACGTGACTCGATTCAGACTTG
TCTGCGTGTGGACAAATACAGGTCGTCACTGCTATTGGAGGGCGTATGTT
CTTTTGCAATGTTATGGCAAATAACTGGGTAGGAAAGTTCCTGACGATGT
GAAAGACACTAAGAATTTCAAAGGAACTGGCTCTCTCATTCAACCAGGAA
ATATTCCTCTGACCATCCAACAATATTGTGGATCATTCCCAATCTACAGA
CTTTACGAAGAAGGACAAAATATACAGGACGAATCGAGGTTTAAGTGTGA
TGAAGATTACGGGTGAAAAGAAATGTTTCCTAATGAAAGATGAGTACGGA
GACACCAATGCCAAGATCAGACACCGATTGAACAAAGCCTTCAAATTATT
CTTCATCGTGGGAATGTCCCTGACAGCATTTGTGTTTGGTATTCCACAAA
AAGGAGATGTTAACATTGAATTCAACGAAAATGGGAGAAAGTTGACCGAG
AAAGTGATTTTCGATGACCAGAATGAAACTACGGAGTATGTGATCGAAGC
AAAAGGAACGCGGGTTTTGGTCGACCATAGAACTATGGGCAAAAGAGGGG
TTGCAACTACGTGACTCGATTCAGACTTGTCTGCGTGTGGACAAATACAG
GTCGTCACTGCTATTGGAGGGCGTATGTTCTTTTGCAATGTTATGGCAAA
TAACTGGGTAGGAAAGTTCCTGACGATGTGAAAGACACTAAGAATTTCAA
AGGAACTGGCTCTCTCATTCAACCAGGAAATATTCCTCTGACCATCCAAC
AATATTGTGGATCATTCCCAATCTACAGACTTTACGAAGAAGGACAAAAT
ATACAGGACGAATCGAGGTTTAAGTGTGATGAAGATTACGGGTGAAAAGA
AATGTTTCCTAATGAAAGATGAGTACGGAGACACCAATGCCAAGATCAGA
CACCGATTGAACAAAGCCTTCAAATTATTCTTCATCGTGGGAATGTCCCT
GACAGCATTTGTGTTTGGTATTCCACAAAAAGGAGATGTTAACATTGAAT
TCAACGAAAATGGGAGAAAGTTGACCGAGAAAGTGATTTTCGATGACCAG
AATGAAACTACGGAGTATGTGATCGAAGCAAAAGGAACGCGGGTTTTGGT
CGACCATAGAACTATGGGCAAAAGAGGGGTTGCAACTACGTGACTCGATT
CAGACTTGTCTGCGTGTGGACAAATACAGGTCGTCACTGCTATTGGAGGG
CGTATGTTCTTTTGCAATGTTATGGCAAATAACTGGGTAGGAAAGTTCCT
GACGATGTGAAAGACACTAAGAATTTCAAAGGAACTGGCTCTCTCATTCA
ACCAGGAAATATTCCTCTGACCATCCAACAATATTGTGGATCATTCCCAA
TCTACAGACTTTACGAAGAAGGACAAAATATACAGGACGAATCGAGGTTT
AAGTGTGATGAAGATTACGGGTGAAAAGAAATGTTTCCTAATGAAAGATG
AGTACGGAGACACCAATGCCAAGATCAGACACCGATTGAACAAAGCCTTC
AAATTATTCTTCATCGTGGGAATGTCCCTGACAGCATTTGTGTTTGGTAT
TCCACAAAAAGGAGATGTTAACATTGAATTCAACGAAAATGGGAGAAAGT
TGACCGAGAAAGTGATTTTCGATGACCAGAATGAAACTACGGAGTATGTG
ATCGAAGCAAAAGGAACGCGGGTTTTGGTCGACCATAGAACTATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14881MSTRG.14881Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14881.1.p1MSTRG.14881.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14881.1.p1.exon5MSTRG.14881.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14881.1.p1.exon4MSTRG.14881.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14881.1.p1.exon3MSTRG.14881.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14881.1.p1.exon2MSTRG.14881.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14881.1.p1.exon1MSTRG.14881.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127_pilongenomesc0000127_pilon:219538..224042 -