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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000127_pilon:183011..190021+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14877.2.p1 ID=MSTRG.14877.2.p1|Name=MSTRG.14877.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=7011bp|location=Sequence derived from alignment at sc0000127_pilon:183011..190021+ (Clytia hemisphaerica_ch_hm2_pilon)
TGACCAATGAGCGGTGGAGATTTCCTTTCAGTTCACCACTCCCCACTCCC
CCACAAGGAAAGTTTGCGATGTTTATGTAGAGTGAGAATTTTGCAAACGG
AGTGGAACAAGATGGCGGAGTTTTTATTCCACAAAGGTTCTCCTACGTAC
TTACAACCGGAAAATGCTGATGTTATGAACATCAGCCAGTTTATGGCACA
AAACCTTCGACAAGCACCACCACCATTAGCTCCTCCAACAAAGCATACAT
TCGAAATATCAGAAGGTGAAAGCgttgaaatcgaaaaaatagtTGCTGCG
GAGAAGAAGGTAAAAACCCTCACCCCTCACCCTCTTTATTATGTTTGTGT
CTCCCCCACACCTAAAATTaggataaaataattataaatttttcaaaaca
ctaTCTTCTTCTTTGCAATGAACAGCTAAACATATTGCCCTTTGAAAAGT
GTTTATCTCTTGTCGTAAAAAGAGTATATAGCATATCTAACATAAATCAA
GATATAAAACTAGGTAAGTCACTTTTTGGTCTTTTGTAGCTTCTAACCTA
TAAAGAGAAGGTACTTTGGTACTTGATATGAAACCACTGCTTGTTTATAA
ACCTCTTTTGATAACTACTACTAGTATGTACTTTTCATTTCAATGCCACT
TTTTTCCCATGTTGCTTGGAATATAATTTTAGGTCAGAAAAACTTTAAGA
GAGAAATTATAATTTAATGATGTACTGATATTGAATTTCCACCATAATCA
TAAACATTGTCAGTCAgtgatttgtttttaaattagcTGATCTTCAGTTT
TTTCTGGCTCGATTCTTTAGTTAGGGGAGAACTCATCAGTTTTATAACTG
GTCATCAGTTTTTTCAGCCTACAGTATATCCTAGACTCTCCACTTTATAT
AATCAAAAACCAATCAATGGATTGGATATTGATTGATTCCGGTACAGACA
GCATTCCcataattcaaacttctcagaaatgacctgtgggaaaatgtgcg
ctccttCCACTGTTGTGTTTAGGAGGTAATGAACGTTTTGCCTACAAGGG
GATAGGGAAAGTGgattttcagcttctaactttttatAGAGATCTCTTTg
attgtgatcgaagtaatccATCGGATACTCACTCGACTCCAGAGTATGGC
ATTTTCTACGACCATTTtcaatttgttcaatcatttcaatTACTTTTCGA
TTATATACCTTCGATTTTATATAATATGTTTCCTGTAGCAGTtcgtcaaa
ataatctgaaattgAGTTTATCCCGCCCAATTAAAACACGCAattcacca
ctttcgttttctccgaccaatagaccttttcgcctttgcgtccgccatat
tgaattgtatgcaaaaatacaggaacgcaaatgccgtggttggatttagt
tggaatgtatgcaaaacatatgcaagtttacacaaagattaaaaagacaa
caaagcatcttataaataaatattataatcattagaacaataaaagatgg
aatttcttaatccaaaaggaaatatttgcagaacaacaaaagccttttag
gaatttgttcttagagacattgcatattctgttttcatgccattaagaaa
ttccacgaagacggagtacacacatcaaactttcaaaacacgcaaactga
aagcagtaattatgacgtcacactttatcaatgttttgatttgatcattt
ggcggctctattcccaggagaataatttgccgtcagccgaataaggattg
ttttttaccttcgcgggtgatttttcagtttgagattctgtctaatgtta
tggtcttttgacgtgcttgttctaagagatgagtgaatataattgttttt
agttttgaagagaagcaaatttaatctttcttctacaagattacacttta
atataatgccaattatgcatgtaagtttttatttaatactttctttttgc
atatgttttgcatactttctaagggaatttcaccacggcaattcggcaac
cataatttttgcatacaattcaatatggcggacgcaaaggcgaaaaggtc
tattagaatgcgcgatatgagttacttgaggaaacccagggcaaAAGCAC
ATAACATGGCGGGGAAATGGCCGGGAAATAAGGGGGTCAATCTTATGGTT
GGCgtttctttttctgctttgtttcagtggttttaagtcaatgttttttg
ttttttttaaagatatatgatagtaattggttatcgaagtaatcaattga
ttattgaagttattgaaattaatcaataacaatcaaagtgcTCGAACAAG
TCTTCGAAGgattgttaagaaagtgatcaaATActcacattttttttgaa
attttgatactcGAATTTgattgttaatcgataagtGGTCGCCAATAATC
AGATTTATTGATATTggctttttggcaaaaatattttcagggtcttataa
tatcatgaatagaatgAACACACTAAAATTTGAGAGGATTTTGTTCAGCG
AAATTTAAGAAAAGCTCCAAAAATTGACTTTCCCTAAGGAAACCCCTAGT
AAGCAAATACAAGTtggtttacctccagagaccaaacaaTGGAGAGCAAC
AAAATAATGCACACactttttttgagaattatGGGAAAGGTGTACTGATa
aacaaaaatcacaatcgaatAAATGAAATGTAATTGAACACTATTGAATG
ATTGCttttcgattgtcaaacgcaattgCATCTCAATCAAATGGTCAATT
CCTAGGTACTGTTACAGCCTTTCTAATTCAGATTTATTTGTGTTGGCAAA
AAATTCTgggtaagtaagtaagtaagtactTTAACGTCATCAAAAGCCAA
ATTTACGTTTCGTCAGCGTTCATGTTAGTTGGTCTTATGAAACATCCCTC
ATTTCATTCTGACACCATTCTTTGGAGCTGGGAATAACAGGAAGGGTTAG
AAAAAATGCCTCcaggaggggtgtttatttgtAACAAGTGGCTGTAAAGG
GGTAGCATCATCAGTGTAGCTTGACCTCTTCAAAATACTTGGTAAGAAAA
AGCTATACCAATTTGAAAAACCCTAACCGTTGATCATGTACCAAACCTTT
GCCAAACACACGAAAAACCCGCAATCTAGTTTTCAACAACCGATCCAGTT
AATGATCAAAGTAACTAATTCATTCTTAGGATGGGCAACTATTCTACAAA
GTCAAATGGGTCAAATACACATGGGAAGCAGAGGAAAGCATTCAACATCT
TCCTCATCTTATTGATGGATATTGGAGAGAACACTTCTACCAAAACATAA
ACCAAGCTGTCATTGATACAGGTGGAATTACAGCTGTTAATACAACAGAA
TCAACAGACCTTACTCGTAACAAATCTGTGGTTGTCAATCAAACAGATAA
CAGAACTGATGCACAAAAGGTAAACTTCCGCAGATGTTTCGTTTTTCact
gatgaaaaaaataaatttgtcatTAGTCcttcaaaaagctttgaaatTGT
TATTGATAGGTGttttttttCTCACCATTTTTGAAGTAATTTTGAGTGAC
TTAACAAGGCAATGATTGGTAACAATGTATTTTCTTTCCACTAAGGTCTC
ACATAAATTTTATTAAGAGCTGTATGGTGGTGTGGTTAAGAGTTAAATCT
GATGAGAGATTGagtaaaaagttattaaaaaaactGGGAGACTATTACTA
AGTGTTACTTGTCAAGCGATGTTGAGAGGTGTTGATATCTATAGCACTAC
AGCAACAACAAATAATCGCAACTTTAGAGAAGTAGGGAGAGGGAGTTGGt
ttgaaaatttatgtttttatttttcaggctGTAGTTGCAGTTCAACAGCC
ATCTGCAGGAAATGTCGCAGGAACAGCAACTGTTCAACTCTCAACCACTC
AAGGACAGGGAGAAGGCACAAAAATAACCACAGTTTCTGGTGACCAAGCA
ACAGGTAATTGGCAGTTAGTCATGGTTACgacccacttttcaggtgcccc
cattgaagcATAATGCACCCAAAAAGGTgcacatttttttgaattgacac
tttctgttcttttgttattcctaaaatcttaatgatTTTTGAGGTGGTTT
GTTATTATGCTAAAAAGATGGCGACTGTAAATCAAAACAgtcacatttga
aaaatatagctAAAGATGAGGTGGAATAAAAACAAGAAtcaaaattggat
gggaaactgggcgctggggtaaaaaaatcaatagtttgaaatattttgaa
gtatTCAATTTGGACAATTATACACAGCCCCCATAGTCTCCATCAAAACA
GCTAGGTACCCcgaatgaataggtaaccccaaaaaattgcaaaatattac
ccacctaacctggcctaggtgcccttcagatttcttgGGGGGTTGATGAC
AGTATGTTAGTAATTCTATTTTCAAAGGATGATTATCTTTTAAATGCGCT
AGCTTGCTGTGTTCTTTGAGTTAACTCATAATAGAGGTCATAACTTCTTG
ATACAAAACTTCGCTTATTAttgcattttttaaatctaCTTTAAATTCTG
CAACAATACATTTTACAAGCATTTGAAGTCAAATTCAGGCTTTGCCTTGT
CTGAAATAAAACAGTATTATATATTTTACAGTATTTTTTCATTAACATTT
AAGTAACTCTTCATTATTTCAGTTGTCAATGGAGCTGTCCTATCTGCAGT
GACCACTGGAAATGTTGGCGAAAGTAATGATGTCATCTTGGAATTCCAAA
TGCCACAGAATAAAGTGGATCATACATACCAAAATAGACTGATCACAGTT
GGAACGACTTCAATCACAGGTGACAAGAAATCGCGACGTGCTTATCCTTT
AGAGCGGAAATACATTTGTACGGTTTGTCAAAAAGCATTTGACAGGAACA
CTTCATTGACACGTCACATGCTTGTTCACACACGTGAAAAACCTTTCAAA
TGCCAGCTTTGTGACAAAGCATTCAGTCAAAACGCTCATCTTAAGCGTCA
TATTCTCATCCATATTGGACAAAAATCGTACCAGTGTAATAAGTGTGGGA
AGATGTTTATCGAGAAAGGTGGCTTAGCCAGGCATGAAGCTACACATAGT
ACTGACAAACCATGGGTATGCAACCAATGTGGAAAAGCATTCGTTTTGAA
TGAATACCTTCAGCGCCATTTATTCTTGCACACAGGACAAAAACCGTACC
AATGTAACGAATGTGGGAGACTCTTTGCTGATGGTTCCTCATGGAGGGCT
CACAAGCTCACACataacaaagagaaaaaatacaaGTGCCCTGTctgtca
aaaaatgctgaaatgCAAACGAAACTTCAAAAAGCATGTACAAGCTCACT
CGGAGGATAAGGATCTGAAACACAAGTGTGAAATTTGCCATGACCGATTT
CCAAATAAGAAAGCATTGCGTGATCACTATCGTAAAGCAAAGAAATATCA
TAGATGCAAAACCtgtaagaaatttttaaaatcaagagCCCGATACCTTG
CTCATGCAGAATTTCACGATCCTGATTCAGACAAATATGATCCCACTGCT
AAAATTGCTGGTGAGGAGTTTGACGACGAAAAGTTCGATGATACGATATC
AGAAGACGACAGTGGTAAATCGGacgatgaagaaaatccatctGACAATC
AATCCCAGCCCATGCACCATCACCATCAGACTATGGTCATCCCTGCCAGT
GCTGGTGGTGGCAGTATGGTTCATAATCAATCCGTTGTCGTAGGTGTTCC
AAACGCTCAGCAACAAAGCGATGAGATTCTATCTAAGATTCTTGCCTCGT
CTGGAAAAGTTGTTCAGCAATCAGATCAAACAACTGGATCTGCCGTATCT
GCATTGACGGCTCTTTATCTAAAAGCTGAGGGAGGAGATGATCAAGTCCC
TGCCCATCTCCAAGTTCAGACAGATAACGAAAGCAACTCACAGGTGATTC
AAGCAATCGGTTCCAGCATCGAAGGCTCTGACATCGCCAGCAATTTACAA
TCTGCTTCACAACAAGTCGATTTATCCATACAGTTAGCATCAGGAGAAAC
TGTACAACATCATCTAAACGCTACGGAAAGTATGCATCACGCAATGGCAG
CTAGAGATGCTGTACAACACCATTTAACACCCACTGAGACCATTCAGCAT
CACATGGCAGCCACAGAAAACGTTCATCATCATTTGACAACGAATGAAAC
TGTACAGCAAATGCAATACACGAACGTCTCCAATACTCTTGATCTACAGC
AAATGCCAGCTGAACAACACTTAGAAACACTAGCAGGGCCCAACCCGATT
GATAATACAGGGACACAGTTAAACACACCAGATAATTCACAAACGAATGA
AAATGTTGTTCATGCTGATCGACAACAAGCTCAAGAAACGATTATCTTGA
TCACGCAAAATAATGACGTTGATATGCAACAAATGAGAGAGCTGTGAAAA
TGATGAACAGGttttatttaagatttcgagtaataatttatttcatttat
tatttttatctcTAAGTTGGAACTTTTGGTACTAAGGAAATCTTCTACAC
AAAATTTTTGACGTATGCGtttttttGTATGCCTGATGTACATGTTGTTT
ACAGATTAAGATACCTTAAAGGACCTAATTTTCACGGGCTAAAGTTCTTT
CATATTTCTAAGggtttttaaggatttttagtAAAGATTGCATTTCGTGG
AAGTAATCTTCACCTATAAACGCGAAAATTCCCCGTAAAAATTAGTTACT
CTGTGAAGCATATAAAAGGGCTTTTCCTTCTCGTACGCCACTGTTCGATT
GCATCTTAGTAATGCgtcttttattaaatttttaacgttttatatcgtaa
attttattagtttttgtgTCCAGATagctttcttttatcaaaattattgt
CGAGAGTTTCTGAtcactttttttctaaaatataatGTAAATAGCATATC
GATTTATGAAAGCGCggttattttgttattttcaatACTCACTCTAATAC
TCGTAATATAA Coding sequence (CDS) from alignment at sc0000127_pilon:183011..190021+ >MSTRG.14877.2.p1 ID=MSTRG.14877.2.p1|Name=MSTRG.14877.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1698bp|location=Sequence derived from alignment at sc0000127_pilon:183011..190021+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGCCACAGAATAAAGTGGATCATACATACCAAAATAGACTGATCACAGT
TGGAACGACTTCAATCACAGGTGACAAGAAATCGCGACGTGCTTATCCTT
TAGAGCGGAAATACATTTGTACGGTTTGTCAAAAAGCATTTGACAGGAAC
ACTTCATTGACACGTCACATGCTTGTTCACACACGTGAAAAACCTTTCAA
ATGCCAGCTTTGTGACAAAGCATTCAGTCAAAACGCTCATCTTAAGCGTC
ATATTCTCATCCATATTGGACAAAAATCGTACCAGTGTAATAAGTGTGGG
AAGATGTTTATCGAGAAAGGTGGCTTAGCCAGGCATGAAGCTACACATAG
TACTGACAAACCATGGGTATGCAACCAATGTGGAAAAGCATTCGTTTTGA
ATGAATACCTTCAGCGCCATTTATTCTTGCACACAGGACAAAAACCGTAC
CAATGTAACGAATGTGGGAGACTCTTTGCTGATGGTTCCTCATGGAGGGC
TCACAAGCTCACACataacaaagagaaaaaatacaaGTGCCCTGTctgtc
aaaaaatgctgaaatgCAAACGAAACTTCAAAAAGCATGTACAAGCTCAC
TCGGAGGATAAGGATCTGAAACACAAGTGTGAAATTTGCCATGACCGATT
TCCAAATAAGAAAGCATTGCGTGATCACTATCGTAAAGCAAAGAAATATC
ATAGATGCAAAACCtgtaagaaatttttaaaatcaagagCCCGATACCTT
GCTCATGCAGAATTTCACGATCCTGATTCAGACAAATATGATCCCACTGC
TAAAATTGCTGGTGAGGAGTTTGACGACGAAAAGTTCGATGATACGATAT
CAGAAGACGACAGTGGTAAATCGGacgatgaagaaaatccatctGACAAT
CAATCCCAGCCCATGCACCATCACCATCAGACTATGGTCATCCCTGCCAG
TGCTGGTGGTGGCAGTATGGTTCATAATCAATCCGTTGTCGTAGGTGTTC
CAAACGCTCAGCAACAAAGCGATGAGATTCTATCTAAGATTCTTGCCTCG
TCTGGAAAAGTTGTTCAGCAATCAGATCAAACAACTGGATCTGCCGTATC
TGCATTGACGGCTCTTTATCTAAAAGCTGAGGGAGGAGATGATCAAGTCC
CTGCCCATCTCCAAGTTCAGACAGATAACGAAAGCAACTCACAGGTGATT
CAAGCAATCGGTTCCAGCATCGAAGGCTCTGACATCGCCAGCAATTTACA
ATCTGCTTCACAACAAGTCGATTTATCCATACAGTTAGCATCAGGAGAAA
CTGTACAACATCATCTAAACGCTACGGAAAGTATGCATCACGCAATGGCA
GCTAGAGATGCTGTACAACACCATTTAACACCCACTGAGACCATTCAGCA
TCACATGGCAGCCACAGAAAACGTTCATCATCATTTGACAACGAATGAAA
CTGTACAGCAAATGCAATACACGAACGTCTCCAATACTCTTGATCTACAG
CAAATGCCAGCTGAACAACACTTAGAAACACTAGCAGGGCCCAACCCGAT
TGATAATACAGGGACACAGTTAAACACACCAGATAATTCACAAACGAATG
AAAATGTTGTTCATGCTGATCGACAACAAGCTCAAGAAACGATTATCTTG
ATCACGCAAAATAATGACGTTGATATGCAACAAATGAGAGAGCTGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000127_pilon | genome | sc0000127_pilon:183011..190021 + |
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