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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000127_pilon:119094..124791+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14871.2.p1 ID=MSTRG.14871.2.p1|Name=MSTRG.14871.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5698bp|location=Sequence derived from alignment at sc0000127_pilon:119094..124791+ (Clytia hemisphaerica_ch_hm2_pilon)
GTGTCGCATCCCGGTTGAAGCGTTGCGaaaaaaaCGCAACTTTACGGAAT
ATTGCAGCGCTGCAGAACTATGCAACTTGCGGAACTGACATCAacttaaa
aaaccttttttcgttCTAGATTATAACAATAAAGAGCAGAGGAAAGATGG
CGCAAACAGTTGAAATCATCGATGTTACCAAAGTGAACGAGACAGTTAAA
GCAGCTGTAGAACGTACGACTCAATGGTCAGGGAAGGTTCAACCTTATGC
CAAGGATATTGTGGAACATTACAATGCGGAGGCTGAAAGTTACGAAGAGA
TGTACTTAACAATAGGTTATCATGATCATTAGAAAGTTAACGAGATCGCG
TGTGAGCTTATCCCGGATCTAGCGACAAAAGAGGTGATTGAAGTTCTGGA
CATGGGCTGTGGAACTTGGCTTGGAGAAGATCAACTTTTGAAGGTTGGAG
GATTCAAGAACATCTTTGGTGTTGATGCTTCCGTTGAAATGATGGCCAAA
GCAAAAGCTAAGGAATCCTACAAGCAGACTTTCGAGCTTTAGCTTGGAAA
ACTGGAAACATTTCCCAAATATCTTCGGAACAGATTCCAGCTTGTTGTAT
GTTGTGGAGTTTTGGTTGAAGGGCATTGTGACAAGAAACTCTTTGACGAA
ATGATAATGGCGGCGAAGGGGCGTGGTTCCATCATTATCTTTTCCACCCG
AGATCATTACTTGAGAGATTATATCAAAAGAGAATGGATGAGTTAGAAGC
GAATGGAACCTGGAAACTAGCCAAAAGTCTTTTGACTCACAAATATGATA
AACTGGGTGATAAAAACCTTGGAAGATTCAAAAAGACCGAAGTAAGAATT
TGTGCCTATGAAATCTTGTGATCATAAAGCATtagaaattcaaaccaaaa
taTCGAAATGAACAATctaataaaattttaactttttcgtttttttaatt
cattgaaTGTTTTTCCACTAACATAACTTGCCTCATGtccaaacaattac
catggtgattatgtgcCTTGAaacataaaatgattttttttatgaataga
ataGTTTTAATAGTAAAAGTTTTAATAAAACCACTGGGAGTTAATCACCA
TGGCAATAATTTCAAAACGAGATAAGTGTTGTTCGTGACGTGATTTATGA
AAAGGTTACCGGAACCCGTACGGTATTACAATTATACTATGAGATCTCAT
AGAATTATTGTAATACCGTACGGGTTCCGGTAACGAGTCGGGTACGGGCT
GGGGTCAGTAATATCGTCATCTTAGGTACTTACGTCACCTACTTAGCTCC
CATATATATCCCAATTTTTATAATATTCATCATTTACAAAATGGGTAACC
TACTGTCAACATCAAGCGTACTTGGCGCTTCAGCCAAAATGTATGGTGGT
TCATTTAAAAAATTAAACACAATTTACAAGAAGAACAAGCAATTTAGAAA
TATCGTCAATCAAAAGATGGACAATAAAGCAGAAGATGTATTTGGACCGG
ACAGAAAGGACCGTAACGGAAAACAACTCGGTACTGTAGATAAATTTGGA
AAACCCTTATTTGGTCAAGGATTACAAGGCGTGGACAACAATCGTTTTAT
GTTTATACCAAAGCACTTGATCAACCCAAACGGAGACCCGGACACCGCCA
ACAAATTAGATTATGCTGACTCTGCATTTTGGTCAGTAATATCTGGGGGA
AAAACGAAATCATTAGTAAAAGCACCAGTAAAAACAGCGGCTACGTCACT
CAAAACTGCAGGGAATATTCGAGCAACCATTAAAGGAACATTAGACTTTC
GTAAAGCAAAAAAGagatataatttaaaaaaaaacatgacaaAGCAACAA
AGAATAGAATTAAaggaaatatataaaaatacaGCAGCAGATAATGAACC
attgttaaaaaaaagtaattttatgAGGGAAAATATAAAAGACTTTAGTC
ATACAACAAATGAAATTCCTTATCAACAATTGGGAAAGAAACCACCGGTT
CACTCAGAGTTAGTAAATAACTTATTTAAACCTAAACCGGTAATGGTtct
cgaaaacatttaaaaactcaTATCACAACTGTTGGTTACAAGTCCAAGAC
GTTAGTTAAAGAATATGGCAACCAGATCGCGACGGACGCGGGGGATGCAC
TTTTACCATCCAGCggacaaaaaatattacaaaaaggCAAAACGGGGAAC
TTGGACGACTCATACCGGGTTACTCATGCCACCAAGGGATCAACCGTTGC
AACAACAACCCGAAAACGAGGAGCCCCCGGAGAATTCTTCCCCAGCGAAT
TCGACGCAGACGAGTGGAGAAAACATAAACGAAGAACCCGATACGAGTAA
CAGTTCGTACGGTGAAACAGACTCAAGCGGTTCAACAATGCCTGATCCTG
TGAGACATTATGTTATTGAGAAAGAAACAATTGAAAACTTTTACAATGGT
GCAATTATTCCATTATATcaaaaaatacaagatataaAAACTATGATTGA
TACACAGTTAGTCCCATTTGCGAACGATGTTAAAGCAGAGTTAAGACGTG
CTATGGACGAAGCTCATTTAGAAGAAGATGATCACTGAACAGGAAGATAT
CGCGGTCCCTGACCAAATCAATTCACCAGAACCTGAATCAGGATTTCGTA
AAATTCTATTTAAACAAACTATATTAGCACAACATAAAATTGCCGACAAT
AAAGATGGCGAAAACATATTTGGTATACACTGGCAAGATATGAAATTACC
AATTGGCGAAAGTGTAATCAaagatgaaacaaaaaaaggaaaagcatGGT
ATCCAATACGAGCTAGTGTTGTTATTGATGATATCCAAGTTTCTCAAATT
GAAACAGGGGCAGAAGTAGACGTAGGCAGAGAAGTTGGAAATGAAACATT
CTTTGTATGGGATCCTGTGGATCACAGAAATTACTtaacacccggggggg
ggggtactaggtttgcgaggtgacgggtatgtccgagccgaaaatcgaaa
atcgaccctttgagagacaaaattttggtgattttgggaccctttgagag
actttttcctaaattttggtccattttttccaaattttgctttgattttc
accaaattttggtcaaaattcttggaaatcgtgaccctttgagagagaaa
tttttgatttttgtgattttaggaccctttcagagactaacttttgactt
tgtacccctttgagagacttttgaggaatgagaaaaggtacccttatggc
tcgcacatacccggcacccattttgcctaagtacccccccccgggcttaa
aACCGACATATAGTTTAAATGTATGTTCAAACGACGATGATAAAAATGAA
GTAGAACTTTGTAAACTGGCTCGGTCTAATACAGAACGAAATGTATATAC
TAAAGACGTATTtcccaaaattgaaaaagcaaAAGAATTATTTGTTAATG
GCCGCTATGCTAAAAATGTTGGACCGGACCTCGTTTATGATGATTTGTCT
TGGAAGTTTACCTCTGCTGATTGGAAAGAAATGTTTAATAAACCTGAAAA
ACCGTGTTGGGCTACCCAATGGACAAACGATAGCAGACTATTACGGTCAA
TGAATGAATTATGGTCCCCTGTCAAACAACTTATCAAATATGACCTTAAA
AAGCCAAATAAAACTGTTAATACTGCCAATAAATATCAAGTCACCCATCC
CGAAATAGACAAATGGCAACGTATGCACGGAAAAGCTTATGTTATTAATC
CTCTTGATTATTCGGCCGGTGTTTTAGTTCATCCTAATTCTGAAATTGGA
GGTTGGGAAGAAAACTTTGACCCGGAAACAAATGATGAAATTGTCGCCGG
TGATAACACATGGTTTGCTTCGGGTACTATAACAGAGGCAGACGAATGGT
GGCCTGGTTTTAAACCCGTTACAGGTCAacgaaataaagaaaatgagttA
CATCAATATATACCAAGTAATGTATCTGCTTATACAACTCAAACACCTTA
TCGATTATTATCAAAACAAGATTGGAGTCCGTATGTAGAACACGCTGGAC
TATATGCTAAAGAAGATTGGGCTGATCCAAAACAATGGCCTGGTCCTGGA
TCAACAAAAAGATGGTGGTATAAAGAACAACCGTTCTCGTCAGAAAAAGC
TATGCGTCCAATCTATTTTAAGTTTCAACCAAAATATAATGGTACTACGT
TACGTAACATGTTTGTCAGATTTGAAGTTAAATTTGAATACGAAATTGGA
ATTTATGAAATTGAGCCTTCTCTTAATGCTACTGAAAGAGATAAAATGGA
TAACAGAGCTTATACTGCTGTTAACAAAGACTTACATGGAGGACCGTCTA
AAAGAAAACTTATTATGTGTGACCCAATAAATTCGTTAACTACAGACAAT
GCTCGAATGACCGTTGAAAGTGGTTATAACAGAATGTTTATAAGGCAACC
GCAAGTTCATTGGTTTGAATGTAAAAATGGAGAGAGAGTTTCGGACGTAT
TAGAAAATGGATTaataccaaaaaataaaagacaacGTATTGAATAAATT
TTATCTAACCATTTTGTCATAAAATCATTATTATTAAGTAAAAGTTAGTT
TCGTTTGGAACAAACGGACAATATACCAAAGCTTTAAAATTGAAGTTAGA
TATCTTAAGAAACTGACGTGGCCCAAAATTCTCGAAACTAAACATAATCA
TAAGTCTATACGTGGCACTACTTATTGATTTCATCCTTTGTATTCTATAT
AAAGACAAAGAAAAGGTTATGAAAATAAGATATGTATCATCTCGTggaaa
ttttactaattttttttgagctttCATTTATCCACAGAATATCAAACCAT
CATGTGTCGCATCCCGGTTGAAGCGTTGCGaaaaaaaCGCAACTTTACGG
AATATTGCAGCGCTGCAGAACTATGCAACTTGCGGAACTGACATCAactt
aaaaaaccttttttcgttCTAGATTATAACAATAAAGAGCAGAGGAAAGA
TGGCGCAAACAGTTGAAATCATCGATGTTACCAAAGTGAACGAGACAATT
AAAGCAGCTGTAGAACGTACGACTCAATGGTCAGGGATGGTTCAACCTTA
TGCCAAGGATATTGTGGAACATTACAATGCGGAGGCTGAAAGTTACGAAG
AGATGTACTTAACAATGGGTTATCATGATCATGAGAGAGTTAATGAGATC
GCGTGTGAGCTTATCCCGGATCAAGCGACAAGAGAGGTGATTGAAGTTCT
GGACATGGGCTGTGGAACTGGGCTTGGAGGAGATCAACTTTTCAAGGTTG
GAGGATTCAAGAACATCTTTGGTGTTGATGCTTCCGTTGAAATGATGGCC
AAAGCAAAAGCTAAGGAATCCTACAAGCAGACTATCGAGCTTTGGCTTGG
AAAACCGGAAACATTTCCCAAATATCTTCGGAACAGATTCCAGCTTGTTG
TATGTTGTGGAGTTTTGGTTGAAGGGCATTGTGACAAGAAACTCTTTGAC
GAAATGATAATGGCGGCGAAGGGGCGTGGTACCATCATTATCTTTTCCAC
CCGAGATCATTACTTGAGAGATTATGGATATCAAAAGAGAATGGATGAAT
TAGAAGCGAATGGAACCTGGAAACTAGCCAAAAGTCTTTTGACTCACAAA
TATGATAAACTGGGTGATCAAAACCTTGGAAGATTCAAAAAGACCGAA Coding sequence (CDS) from alignment at sc0000127_pilon:119094..124791+ >MSTRG.14871.2.p1 ID=MSTRG.14871.2.p1|Name=MSTRG.14871.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=444bp|location=Sequence derived from alignment at sc0000127_pilon:119094..124791+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGCTGTGGAACTGGGCTTGGAGGAGATCAACTTTTCAAGGTTGGAGG
ATTCAAGAACATCTTTGGTGTTGATGCTTCCGTTGAAATGATGGCCAAAG
CAAAAGCTAAGGAATCCTACAAGCAGACTATCGAGCTTTGGCTTGGAAAA
CCGGAAACATTTCCCAAATATCTTCGGAACAGATTCCAGCTTGTTGTATG
TTGTGGAGTTTTGGTTGAAGGGCATTGTGACAAGAAACTCTTTGACGAAA
TGATAATGGCGGCGAAGGGGCGTGGTACCATCATTATCTTTTCCACCCGA
GATCATTACTTGAGAGATTATGGATATCAAAAGAGAATGGATGAATTAGA
AGCGAATGGAACCTGGAAACTAGCCAAAAGTCTTTTGACTCACAAATATG
ATAAACTGGGTGATCAAAACCTTGGAAGATTCAAAAAGACCGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000127_pilon | genome | sc0000127_pilon:119094..124791 + |
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