MSTRG.14869.1.p1 (mRNA) -

Overview
NameMSTRG.14869.1.p1
Unique NameMSTRG.14869.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000127_pilon:91976..94448-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14869.1.p1 ID=MSTRG.14869.1.p1|Name=MSTRG.14869.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2473bp|location=Sequence derived from alignment at sc0000127_pilon:91976..94448- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGAAATCTAAAATTATTTTCGGCATTCTAAGAAAAACGTTGCTTTCAT
TTTCTTTTCATTCATGCGGTTGAAAAATTTGTTCGATCATCGCCCGGGAA
AATCTTTGCAAGTTTCTGTTAGAAACGGAGATTGGTTGTGCTATCAATCA
AAAAAAGTTCATCATTACAATCTCATGATATATCCGGTGTCAAGGAAACA
AAAGAAAACAAAAGAATACTTTGTTTACAGAACACAGCAGCTGTGAAAAT
TCAATCATCGAGACAACAAACACGATTGTTTGGATAAGAGAGGCAAACGA
CGTGGACTGTTTAACAGTTTTTTTTTTCACACAAAGTGAGTTGAAAAATG
TTTGAAAAGTTTTAAAAGTTGAACTTTGGATCTTTATAATCTGTATTAGA
GATATTATAACATCGTATTACGATTTTTTCTTTTTATTATTGTGGTCTAG
AGTTTACACTCGATCGAAAAGATATGTTTTGGATTTGATATTTCACCTGG
AAACCTTACACAAGACTATTTCATAAAATTTTGAAGGAGGAAAGGAATGG
CTACAGAAACTTTGGTACGTTTTTCTGAAAATTCATTTACGGTATTAAAA
ATGGATGAAGGAACTTTGCATTTGAAAAGACAAAGTTAATTTGAAAATAA
CGAGAGAGCAATTAACAAGATTAGGCTAATTTCTAATAATCTTTAATAAC
AGAAAAATAAAATTGGTTACAATGAGAAATGATTTACAGTACACGCTTTT
TTTTAATAAGAATACACTTTATAAGAATGTCCATGATGAAAATGGCCAAA
AAATTAAGAATAATCCTAAGAATATCACCATCATAGAATTTCGCTACTCA
TGCTAAGAATGCCATTTTATGCTTGAGACGTATGTACTAAATGTTAAATC
TAGTCTGAATTAGGATCCTAACCTAAAAATACTGTAAGAATATTTTTCGA
TGATTTTCCCAAAAAAGTTAAGAAAATCCATGATGAAATGGATTTACACC
ATTCTTATAAAAAAAAGCGTGTATCATAAACATGAAATAAAGCAAGTTTA
AATATAGCTTTCCAATGAACACCCCTGTATCATCGATTGCTTTCTTCTGG
TTGGTTGGTCTCTCCGAAAATAAAAAAAGGTCCAAACACTGTGTCTGAGA
GGCGAACAATGTACAGTAATACACATTTTTTTTATAAGAACATCCAAAAT
TTTTCAAGCCGTGGGATTATCTTAACTTTTAGAGTTTTAAGCCTAAAAAT
GTTCTAACATACACTTTCTGAGTATTTTTGTCCATTCTCCTAAGAAATAA
TCAGGTGTTTTAGAGTCTGCAAAGCCTTTAAAATGTTCTTAACTTGTTCT
TAATATTTTGGACACCTAAGCCTTATGTTTTTATATAGTTTGTTCTTATA
GAAAAAAAAGTGTAAGAAAAAATGACCAAAAAATCAAGCAACTTGGCTTC
ACAACTATAGTAGCCCTGATACTGACTTATAAATTGTGAAAACAAACATA
AGCATTTTAAAAAGGTATTTTTGGCATTATCTGGCATCAAAATATATTAA
GGCTTTTAAGTACCTAATTTGAGGTGTTTTAGGCATTAAAGCTTTGAGAC
TGACTGAAATCATGTAAATTCTTAACAATCACAACACGCAACAAAATTAG
GGTTACTCATAAAAGGTCAAACGTCTGGTTGATTGGTTAAGTCTTTACCT
TAGAAAGATCTTGCACTTAGCTTTGCGCACAGATGGGAAGGAAGCTTACC
TATAAAAGTGGTTTTAAGTTATAAACGTTAGATGCTTCGACTTTCCAAAA
TCTAGTGGTATAATCTATAAAACTCATTATCGTTGTCTCTTTTTCACTTT
CAGAATGCAGATCGTTCCAACGAGATTTCATCTGATTTCATCTCATCTGA
TTCGCTGAACCAAAATGAAGCGAGCCAACCACAAGGCGGTATAGTGTCAC
GTGTTGCAGGAGGCGCATACAATACAACAGCCACTGTTTTGGGTGGAGCA
GTGGGCGGTGCAAAATACGTCGCCAGTCCAGTGGTGGGTGGAGCCACTTG
GATCACAGGAGCAGCTCTTTCAACTTCCCTCGGAGTCGCAAAATCGTCAT
TCGGGCTCGCAAAATCCGTCGGCAGCTATGTTCTTCCTGCTCGCTTCGCT
CCTGCAGTTGAAAAAGACAAATGTGAATAAGTGAGGCAAAGAGAATGGAA
AAAGTTGCGTTTCATTTTTCTCAGTTACCCAGGTGAGGTACAAACTGAGC
ATGCGGGCCATGCTGAAATGATTTTGAGGAACTTTCAAAGACCGTATACC
TTTCCCTGAACGAGCGTCTTCGCTCCACGAAAATTCTTATCTTTTTAAAG
AGACTTTTTTATTTATATTAGCGATATTTTATTACAATTATAACAACAAG
AAAAATAAAAATGAAATTATTATGTATTAATGCATTGCTAGTGATTTTGG
CGAATTGATTTAGTGTTTCGAAA

Coding sequence (CDS) from alignment at sc0000127_pilon:91976..94448-

>MSTRG.14869.1.p1 ID=MSTRG.14869.1.p1|Name=MSTRG.14869.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=690bp|location=Sequence derived from alignment at sc0000127_pilon:91976..94448- (Clytia hemisphaerica_ch_hm2_pilon)
AATGCAGATCGTTCCAACGAGATTTCATCTGATTTCATCTCATCTGATTC
GCTGAACCAAAATGAAGCGAGCCAACCACAAGGCGGTATAGTGTCACGTG
TTGCAGGAGGCGCATACAATACAACAGCCACTGTTTTGGGTGGAGCAGTG
GGCGGTGCAAAATACGTCGCCAGTCCAGTGGTGGGTGGAGCCACTTGGAT
CACAGGAGCAGCTCTTTCAACTTCCCTCGGAGTCGCAAAATCGTCATTCG
GGCTCGCAAAATCCGTCGGCAGCTATGTTCTTCCTGCTCGCTTCGCTCCT
GCAGTTGAAAAAGACAAATGTGAATAAATGGCTACAGAAACTTTGAATGC
AGATCGTTCCAACGAGATTTCATCTGATTTCATCTCATCTGATTCGCTGA
ACCAAAATGAAGCGAGCCAACCACAAGGCGGTATAGTGTCACGTGTTGCA
GGAGGCGCATACAATACAACAGCCACTGTTTTGGGTGGAGCAGTGGGCGG
TGCAAAATACGTCGCCAGTCCAGTGGTGGGTGGAGCCACTTGGATCACAG
GAGCAGCTCTTTCAACTTCCCTCGGAGTCGCAAAATCGTCATTCGGGCTC
GCAAAATCCGTCGGCAGCTATGTTCTTCCTGCTCGCTTCGCTCCTGCAGT
TGAAAAAGACAAATGTGAATAAATGGCTACAGAAACTTTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14869MSTRG.14869Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14869.1.p1.exon2MSTRG.14869.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14869.1.p1.exon1MSTRG.14869.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14869.1.p1MSTRG.14869.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127_pilongenomesc0000127_pilon:91976..94448 -