MSTRG.14867.4.p1 (mRNA) -

Overview
NameMSTRG.14867.4.p1
Unique NameMSTRG.14867.4.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000127_pilon:79669..83029-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14867.4.p1 ID=MSTRG.14867.4.p1|Name=MSTRG.14867.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3361bp|location=Sequence derived from alignment at sc0000127_pilon:79669..83029- (Clytia hemisphaerica_ch_hm2_pilon)
TGCTCCTTTAGCTAGACATCGAACATGGATTAAAAACAGGTTCCAGACCC TTTTAATATAGAAACCTCACACTGAATGATGCCAGAAAATTGAGTGATTC TGAGTGAAAAGCATGTACAGAAATATGTCGAATGACCACTTGCTAATTAA GACGTCCAAAAGACGTTCAAAAGACGCCTCGTCTGTTATGAAAGAAAGGT CGAACCTCAACCGCACCTAATTGGATGATAAAAAAAGGTTTTGAAACAAA GAGGTTGGGTTCCATACTTCGGTTGGTTTGATGTTGTGTATAAAAGGAGG GGAGTTGGAGTAAAAGCTATTCACTCATTAACCAATCAATCGAAAGATCA CAACATTCTTTAAAGGTAAGCCTACTCACGATATTTTGTAGCATGTGTTT ATAATTTCTTTGGTAAAAGATGGCTTTTGAATACAAATATTGTTTGGGGG GGGGAGAATGGTACGGGTGATTATGGTAACACATATATTTGTAATTTGTG AAAATAAACATTACTTCATAGACTTCGGTGACAATTTACAAATATTTAGA CTCTTTAATTACCAGGGCAAATTAGGTTAGGAATTTTTAGCAGCGTAAAT GTTCTAAAGTTTATAGGATTTGTTGTGTGTTTACAGATTCAAGAAGGAAC GAGCACTGTTGGAACCTGTCAAACGAGGTCATGGAGAAATTGGTAGCCTT TTTGAGTTTGTTATCGTTAGTGGCAGGTAAAAATGTTTTGAAACACTCTT TTTTTATATTGATTATTATCACTACTTGTCAAAGAGTCAGCGAAATACAA CTCGACAAACTAGCACCTTCCAGTAAGTAAATCACAGTTTCGCGTCTTTG ATTTCTGAGACTTCCATGTATACTTCCATGATGGATGCAAACTGAAGACA AATCTTTTAGCTTTCTCTTTTGTTTCAGCTTCAGGAAGTCAGCTTGGACC CTCACAAGCCTGTGACTGTAGAAAAGGTAGGGAACATTCATCATTTTTAA CTCTCCTTTGGAATTTCACAAATGAAACTGATTGCTGCCAAAGGAGAAGA TTTGATATACCGTAGCTTACACTATGAAATACTCAATAATATTACGACAC AAATATTGCAAACAATCACTATCCACAAACTGCTATAATGGACAACTATT GACAAGAATCTTGCATTAAACTTTTTTGTTTCCTTAATTTTTCATACTAG TTGATGGAGGACTCACAGAGTGGACCCAATTCACACCGTGCTCCACATCA TGTGGCCCAGGGACCAAAGAACGAGTTCGGTTTTGTGCGGCGCCTTACCC ACAATATGGTGGAAAAGATTGTAGCGGAGCCTTGAGAGAATGTACACAGT GTGAAGTTAAACCTTGCCCAGGTGAGCAGAGTATCTTCTGAGAGAATAGC TGTGAAGAAATTGTTTGGGACAGGATGCTAACAACCTTTTCTTGTTAAAT CTTTCATTTTTTGGTTACTATCCGAAACATCAATCAACCAAGAAAATCTC TACCACAAACTTCCGCTGACAAAATGCGTGACGTTAACCTATCATTAAGA GTTTGTCTCCAGACTTTTACTCCATTAAAGCCAAATACCTCAAAAAGTTA TTTCCCTTTCCTTAACTTCCTATACATTTGCCGAAATTTAGAAAAAGAAC AAGAAAAAAACATTCTTTTTTGAAAATTGACCTCTTTGTGAAAACCTATA GAAACATACCCATACCGCTAACGAAAGATAATTACTCAAAACCCGAAAAA AGATAAGATAACGATAAGATAACGTTAACGAAAGATAATTGCTCAAAACC CTGATCTCTTCTTCTCTCCAGTGGATGGCGGTTGGTCGTCATGGAAACCT GGTGCATGCTCAAAGACATGTGGAGGCGGAAAGAGAATCGAATTGAGAAG TTGCACAAATCCTGCGCCTGCGCATTGTGGACGAAGGTGCCAAGGTTTAT ACACAAGAACCGCTGACTGCAACACACACAAGTGCCCAGGTATGAGCAGA GAGATTTTCAAGTCAGTTACACGACGCTTTCTCTAGCCATTCTTTCTATA AAGGAGCTCAATTATTTCACTTACACTTTTGACAGAAAATACCAACGAAA CAATTAGCCTCAAAGTGTCTCACTATTAACCAAAAAGATGACATTACCCC ACAACCACACATGGTTAAGGCATAATTATTACTATGCTTAAATAACGAAA GAACCCTTTTGAATAAGGACCTCCTTGGAAGTATCTTTCCAACGATGTAT AATTTTTGATTTAATTTTCACGTACTTTTGAAATAGACTTTAACAGTTTT CGCCAAACTAAGCAAACCTAACGATAACAGTTCTTACGATTTGAATGCTA CTCAATCAATTAGCAACTTTTTTTTCTCTCTCCAAGAATTTGGTCCATAC AAATGCGGCAATTGTGAAAGGGACGGCAGTGGAGCGTGCAAGAAGATTTG CAGACGTCAATGTTTCTACCAATGGAAAGTGGTCGATAATTCCATGTGCT CTGGTCAATCAGCAGAGGTTCGACCATGCGATCAAAGTCATTGTCCGACC ACCACACAGGCTACGACCACCCGTGCCAGTAAGTTTTCGTCTACCGGTGG AATCGTTGAAACTTTCTGAGTGAGTTGCTCATTCGTCGCTAACTTAGTTA AAAAATTAAAGTGCCTGATGTTATCCAACTTGTCGATTTGAATAGAACAA AGCCAAACGAAAGCGCTTAAGATGATTATTCCATATAATTGATGCAATTA GTTCTCTTTGTTTCAGTTTATGGTTTCTGTCAAGATTGTCAAGCCAGGGC GTTGGAGATGGCCAAGACCATGACTGATCCGTACCAAATGGCAAACTTTG TCGGCCTCGCTTGTAAGTTGATCACACTTGTGTACAAGGAAAGAAATTAT TATCAACCTGTAGGAGATTTCTCTTATAAAATGTTTTTTCGAAGATTCAA ATTTTAGAAGACTCAGTTTGAGGGATTTGCTTTTTGAATTTTGTAAACTA CTTTATAAAATGACCTTGGGTCATTCCCCTTGTGTTCCAGGGGTATAAAG ATTTCACAAAGTTGAAACTAATCTATTTTTCTTGTCTCTTCTCAACTCCA GGCCGCGACAACGAAGTTCAAGCCAATCTGAGAGCAATCTGTGACGACAA TAAAAACAAACAAACGAAAAACGGAGGTCTTCCAGCCAATGGGTGGTGGT GGATCCACTGTTCAGTCGATGGACCTTGGTGTAAACCATGCGCTACTAGA GGTCTGGTTTTCAACTCGAAATGTGATGCTTGTGAGCTGACACACGATGG ACCGTGCACTGGACCTCACTCAGGATAGAATTTTGCCCAAACTGGTTCCA CCTTGAAATTA

Coding sequence (CDS) from alignment at sc0000127_pilon:79669..83029-

>MSTRG.14867.4.p1 ID=MSTRG.14867.4.p1|Name=MSTRG.14867.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6636bp|location=Sequence derived from alignment at sc0000127_pilon:79669..83029- (Clytia hemisphaerica_ch_hm2_pilon)
GCCGCGACAACGAAGTTCAAGCCAATCTGAGAGCAATCTGTGACGACAAT
AAAAACAAACAAACGAAAAACGGAGGTCTTCCAGCCAATGGGTGGTGGTG
GATCCACTGTTCAGTCGATGGACCTTGGTGTAAACCATGCGCTACTAGAG
GTCTGGTTTTCAACTCGAAATGTGATGCTTGTGAGCTGACACACGATGGA
CCGTGCACTGGACCTCACTCAGGATAGTTTATGGTTTCTGTCAAGATTGT
CAAGCCAGGGCGTTGGAGATGGCCAAGACCATGACTGATCCGTACCAAAT
GGCAAACTTTGTCGGCCTCGCTTAATTTGGTCCATACAAATGCGGCAATT
GTGAAAGGGACGGCAGTGGAGCGTGCAAGAAGATTTGCAGACGTCAATGT
TTCTACCAATGGAAAGTGGTCGATAATTCCATGTGCTCTGGTCAATCAGC
AGAGGTTCGACCATGCGATCAAAGTCATTGTCCGACCACCACACAGGCTA
CGACCACCCGTGCCATGGATGGCGGTTGGTCGTCATGGAAACCTGGTGCA
TGCTCAAAGACATGTGGAGGCGGAAAGAGAATCGAATTGAGAAGTTGCAC
AAATCCTGCGCCTGCGCATTGTGGACGAAGGTGCCAAGGTTTATACACAA
GAACCGCTGACTGCAACACACACAAGTGCCCAGTTGATGGAGGACTCACA
GAGTGGACCCAATTCACACCGTGCTCCACATCATGTGGCCCAGGGACCAA
AGAACGAGTTCGGTTTTGTGCGGCGCCTTACCCACAATATGGTGGAAAAG
ATTGTAGCGGAGCCTTGAGAGAATGTACACAGTGTGAAGTTAAACCTTGC
CCAGCTTCAGGAAGTCAGCTTGGACCCTCACAAGCCTGTGACTGTAGAAA
AGATGGAGAAATTGGTAGCCTTTTTGAGTTTGTTATCGTTAGTGGCAGGC
CGCGACAACGAAGTTCAAGCCAATCTGAGAGCAATCTGTGACGACAATAA
AAACAAACAAACGAAAAACGGAGGTCTTCCAGCCAATGGGTGGTGGTGGA
TCCACTGTTCAGTCGATGGACCTTGGTGTAAACCATGCGCTACTAGAGGT
CTGGTTTTCAACTCGAAATGTGATGCTTGTGAGCTGACACACGATGGACC
GTGCACTGGACCTCACTCAGGATAGTTTATGGTTTCTGTCAAGATTGTCA
AGCCAGGGCGTTGGAGATGGCCAAGACCATGACTGATCCGTACCAAATGG
CAAACTTTGTCGGCCTCGCTTAATTTGGTCCATACAAATGCGGCAATTGT
GAAAGGGACGGCAGTGGAGCGTGCAAGAAGATTTGCAGACGTCAATGTTT
CTACCAATGGAAAGTGGTCGATAATTCCATGTGCTCTGGTCAATCAGCAG
AGGTTCGACCATGCGATCAAAGTCATTGTCCGACCACCACACAGGCTACG
ACCACCCGTGCCATGGATGGCGGTTGGTCGTCATGGAAACCTGGTGCATG
CTCAAAGACATGTGGAGGCGGAAAGAGAATCGAATTGAGAAGTTGCACAA
ATCCTGCGCCTGCGCATTGTGGACGAAGGTGCCAAGGTTTATACACAAGA
ACCGCTGACTGCAACACACACAAGTGCCCAGTTGATGGAGGACTCACAGA
GTGGACCCAATTCACACCGTGCTCCACATCATGTGGCCCAGGGACCAAAG
AACGAGTTCGGTTTTGTGCGGCGCCTTACCCACAATATGGTGGAAAAGAT
TGTAGCGGAGCCTTGAGAGAATGTACACAGTGTGAAGTTAAACCTTGCCC
AGCTTCAGGAAGTCAGCTTGGACCCTCACAAGCCTGTGACTGTAGAAAAG
ATGGAGAAATTGGTAGCCTTTTTGAGTTTGTTATCGTTAGTGGCAGGCCG
CGACAACGAAGTTCAAGCCAATCTGAGAGCAATCTGTGACGACAATAAAA
ACAAACAAACGAAAAACGGAGGTCTTCCAGCCAATGGGTGGTGGTGGATC
CACTGTTCAGTCGATGGACCTTGGTGTAAACCATGCGCTACTAGAGGTCT
GGTTTTCAACTCGAAATGTGATGCTTGTGAGCTGACACACGATGGACCGT
GCACTGGACCTCACTCAGGATAGTTTATGGTTTCTGTCAAGATTGTCAAG
CCAGGGCGTTGGAGATGGCCAAGACCATGACTGATCCGTACCAAATGGCA
AACTTTGTCGGCCTCGCTTAATTTGGTCCATACAAATGCGGCAATTGTGA
AAGGGACGGCAGTGGAGCGTGCAAGAAGATTTGCAGACGTCAATGTTTCT
ACCAATGGAAAGTGGTCGATAATTCCATGTGCTCTGGTCAATCAGCAGAG
GTTCGACCATGCGATCAAAGTCATTGTCCGACCACCACACAGGCTACGAC
CACCCGTGCCATGGATGGCGGTTGGTCGTCATGGAAACCTGGTGCATGCT
CAAAGACATGTGGAGGCGGAAAGAGAATCGAATTGAGAAGTTGCACAAAT
CCTGCGCCTGCGCATTGTGGACGAAGGTGCCAAGGTTTATACACAAGAAC
CGCTGACTGCAACACACACAAGTGCCCAGTTGATGGAGGACTCACAGAGT
GGACCCAATTCACACCGTGCTCCACATCATGTGGCCCAGGGACCAAAGAA
CGAGTTCGGTTTTGTGCGGCGCCTTACCCACAATATGGTGGAAAAGATTG
TAGCGGAGCCTTGAGAGAATGTACACAGTGTGAAGTTAAACCTTGCCCAG
CTTCAGGAAGTCAGCTTGGACCCTCACAAGCCTGTGACTGTAGAAAAGAT
GGAGAAATTGGTAGCCTTTTTGAGTTTGTTATCGTTAGTGGCAGGCCGCG
ACAACGAAGTTCAAGCCAATCTGAGAGCAATCTGTGACGACAATAAAAAC
AAACAAACGAAAAACGGAGGTCTTCCAGCCAATGGGTGGTGGTGGATCCA
CTGTTCAGTCGATGGACCTTGGTGTAAACCATGCGCTACTAGAGGTCTGG
TTTTCAACTCGAAATGTGATGCTTGTGAGCTGACACACGATGGACCGTGC
ACTGGACCTCACTCAGGATAGTTTATGGTTTCTGTCAAGATTGTCAAGCC
AGGGCGTTGGAGATGGCCAAGACCATGACTGATCCGTACCAAATGGCAAA
CTTTGTCGGCCTCGCTTAATTTGGTCCATACAAATGCGGCAATTGTGAAA
GGGACGGCAGTGGAGCGTGCAAGAAGATTTGCAGACGTCAATGTTTCTAC
CAATGGAAAGTGGTCGATAATTCCATGTGCTCTGGTCAATCAGCAGAGGT
TCGACCATGCGATCAAAGTCATTGTCCGACCACCACACAGGCTACGACCA
CCCGTGCCATGGATGGCGGTTGGTCGTCATGGAAACCTGGTGCATGCTCA
AAGACATGTGGAGGCGGAAAGAGAATCGAATTGAGAAGTTGCACAAATCC
TGCGCCTGCGCATTGTGGACGAAGGTGCCAAGGTTTATACACAAGAACCG
CTGACTGCAACACACACAAGTGCCCAGTTGATGGAGGACTCACAGAGTGG
ACCCAATTCACACCGTGCTCCACATCATGTGGCCCAGGGACCAAAGAACG
AGTTCGGTTTTGTGCGGCGCCTTACCCACAATATGGTGGAAAAGATTGTA
GCGGAGCCTTGAGAGAATGTACACAGTGTGAAGTTAAACCTTGCCCAGCT
TCAGGAAGTCAGCTTGGACCCTCACAAGCCTGTGACTGTAGAAAAGATGG
AGAAATTGGTAGCCTTTTTGAGTTTGTTATCGTTAGTGGCAGGCCGCGAC
AACGAAGTTCAAGCCAATCTGAGAGCAATCTGTGACGACAATAAAAACAA
ACAAACGAAAAACGGAGGTCTTCCAGCCAATGGGTGGTGGTGGATCCACT
GTTCAGTCGATGGACCTTGGTGTAAACCATGCGCTACTAGAGGTCTGGTT
TTCAACTCGAAATGTGATGCTTGTGAGCTGACACACGATGGACCGTGCAC
TGGACCTCACTCAGGATAGTTTATGGTTTCTGTCAAGATTGTCAAGCCAG
GGCGTTGGAGATGGCCAAGACCATGACTGATCCGTACCAAATGGCAAACT
TTGTCGGCCTCGCTTAATTTGGTCCATACAAATGCGGCAATTGTGAAAGG
GACGGCAGTGGAGCGTGCAAGAAGATTTGCAGACGTCAATGTTTCTACCA
ATGGAAAGTGGTCGATAATTCCATGTGCTCTGGTCAATCAGCAGAGGTTC
GACCATGCGATCAAAGTCATTGTCCGACCACCACACAGGCTACGACCACC
CGTGCCATGGATGGCGGTTGGTCGTCATGGAAACCTGGTGCATGCTCAAA
GACATGTGGAGGCGGAAAGAGAATCGAATTGAGAAGTTGCACAAATCCTG
CGCCTGCGCATTGTGGACGAAGGTGCCAAGGTTTATACACAAGAACCGCT
GACTGCAACACACACAAGTGCCCAGTTGATGGAGGACTCACAGAGTGGAC
CCAATTCACACCGTGCTCCACATCATGTGGCCCAGGGACCAAAGAACGAG
TTCGGTTTTGTGCGGCGCCTTACCCACAATATGGTGGAAAAGATTGTAGC
GGAGCCTTGAGAGAATGTACACAGTGTGAAGTTAAACCTTGCCCAGCTTC
AGGAAGTCAGCTTGGACCCTCACAAGCCTGTGACTGTAGAAAAGATGGAG
AAATTGGTAGCCTTTTTGAGTTTGTTATCGTTAGTGGCAGGCCGCGACAA
CGAAGTTCAAGCCAATCTGAGAGCAATCTGTGACGACAATAAAAACAAAC
AAACGAAAAACGGAGGTCTTCCAGCCAATGGGTGGTGGTGGATCCACTGT
TCAGTCGATGGACCTTGGTGTAAACCATGCGCTACTAGAGGTCTGGTTTT
CAACTCGAAATGTGATGCTTGTGAGCTGACACACGATGGACCGTGCACTG
GACCTCACTCAGGATAGTTTATGGTTTCTGTCAAGATTGTCAAGCCAGGG
CGTTGGAGATGGCCAAGACCATGACTGATCCGTACCAAATGGCAAACTTT
GTCGGCCTCGCTTAATTTGGTCCATACAAATGCGGCAATTGTGAAAGGGA
CGGCAGTGGAGCGTGCAAGAAGATTTGCAGACGTCAATGTTTCTACCAAT
GGAAAGTGGTCGATAATTCCATGTGCTCTGGTCAATCAGCAGAGGTTCGA
CCATGCGATCAAAGTCATTGTCCGACCACCACACAGGCTACGACCACCCG
TGCCATGGATGGCGGTTGGTCGTCATGGAAACCTGGTGCATGCTCAAAGA
CATGTGGAGGCGGAAAGAGAATCGAATTGAGAAGTTGCACAAATCCTGCG
CCTGCGCATTGTGGACGAAGGTGCCAAGGTTTATACACAAGAACCGCTGA
CTGCAACACACACAAGTGCCCAGTTGATGGAGGACTCACAGAGTGGACCC
AATTCACACCGTGCTCCACATCATGTGGCCCAGGGACCAAAGAACGAGTT
CGGTTTTGTGCGGCGCCTTACCCACAATATGGTGGAAAAGATTGTAGCGG
AGCCTTGAGAGAATGTACACAGTGTGAAGTTAAACCTTGCCCAGCTTCAG
GAAGTCAGCTTGGACCCTCACAAGCCTGTGACTGTAGAAAAGATGGAGAA
ATTGGTAGCCTTTTTGAGTTTGTTATCGTTAGTGGCAGGCCGCGACAACG
AAGTTCAAGCCAATCTGAGAGCAATCTGTGACGACAATAAAAACAAACAA
ACGAAAAACGGAGGTCTTCCAGCCAATGGGTGGTGGTGGATCCACTGTTC
AGTCGATGGACCTTGGTGTAAACCATGCGCTACTAGAGGTCTGGTTTTCA
ACTCGAAATGTGATGCTTGTGAGCTGACACACGATGGACCGTGCACTGGA
CCTCACTCAGGATAGTTTATGGTTTCTGTCAAGATTGTCAAGCCAGGGCG
TTGGAGATGGCCAAGACCATGACTGATCCGTACCAAATGGCAAACTTTGT
CGGCCTCGCTTAATTTGGTCCATACAAATGCGGCAATTGTGAAAGGGACG
GCAGTGGAGCGTGCAAGAAGATTTGCAGACGTCAATGTTTCTACCAATGG
AAAGTGGTCGATAATTCCATGTGCTCTGGTCAATCAGCAGAGGTTCGACC
ATGCGATCAAAGTCATTGTCCGACCACCACACAGGCTACGACCACCCGTG
CCATGGATGGCGGTTGGTCGTCATGGAAACCTGGTGCATGCTCAAAGACA
TGTGGAGGCGGAAAGAGAATCGAATTGAGAAGTTGCACAAATCCTGCGCC
TGCGCATTGTGGACGAAGGTGCCAAGGTTTATACACAAGAACCGCTGACT
GCAACACACACAAGTGCCCAGTTGATGGAGGACTCACAGAGTGGACCCAA
TTCACACCGTGCTCCACATCATGTGGCCCAGGGACCAAAGAACGAGTTCG
GTTTTGTGCGGCGCCTTACCCACAATATGGTGGAAAAGATTGTAGCGGAG
CCTTGAGAGAATGTACACAGTGTGAAGTTAAACCTTGCCCAGCTTCAGGA
AGTCAGCTTGGACCCTCACAAGCCTGTGACTGTAGAAAAGATGGAGAAAT
TGGTAGCCTTTTTGAGTTTGTTATCGTTAGTGGCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14867MSTRG.14867Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14867.4.p1MSTRG.14867.4.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14867.4.p1.exon8MSTRG.14867.4.p1.exon8Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14867.4.p1.exon7MSTRG.14867.4.p1.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14867.4.p1.exon6MSTRG.14867.4.p1.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14867.4.p1.exon5MSTRG.14867.4.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14867.4.p1.exon4MSTRG.14867.4.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14867.4.p1.exon3MSTRG.14867.4.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14867.4.p1.exon2MSTRG.14867.4.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14867.4.p1.exon1MSTRG.14867.4.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000127_pilongenomesc0000127_pilon:79669..83029 -