|
|
Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:734298..739882+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1486.1.p1 ID=MSTRG.1486.1.p1|Name=MSTRG.1486.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5585bp|location=Sequence derived from alignment at sc0000007_pilon:734298..739882+ (Clytia hemisphaerica_ch_hm2_pilon)
acaaaaatgaataaaatttaaaaacaggtCATtgcatgtttgtttttgtt
cgGTTTCAGGCAAATTTACCAGAAATTCCGAATGGAGATTGGATTCAGCT
TGTTGCGTGCGAAACGTGTTAAAGTATCCTTGTTGTAAAGAGAAATATCC
TGACGTCACTTTCACCATCGTCATTGCAAGAAGATCTTTGTTTTATTTgt
gtaatttgatttttccCATGACCGTCATTGGAATGTTGACCATTCTATCT
TTCTTACTGCCAGCAGAATCGGGTAAGTTAAGAGCATCAGATTATTTGCC
TGGCGAATAGATCTTTCTATGGTACAGATAAAATGGCGTTTCAGGCCTTA
ATAAAGAAAGACTTATCTTAACTTTGCGCATCAACAAAGATTAAAATgac
tttcttttaaaatgatttacAGCGGATAAAAGTGAATAAACCAAGACTGC
ATTTTTAAAATCTGCAGACCAACTCGATGTTTTTCGGACAAACAGACTGT
TGATTCAATTTATTATTGATTAAGCCGCCTTTTTTCTATGATTTCAAGGC
TTCTTTTATCGATTCGTAATCTAATAATCTAATGGCCATTAGTTTTCACG
CACAAAAGATGTGATAAAGTGAGAATTCATGATCTAGaaaatggctgcgt
ttagaccagcctggcatttgtaattgcttgcagtattcttttgaattcta
ttgttccgcgcgaatgttcggtttgtcaaatgcctaatgatgccagcgtg
ttggcattttgttggcatttgaaatgccattttgagcaaaggaatcccct
tttctggcatttcaaattaaacaaaggaaccaaaacaaagaaaaaaaatg
acatttttgattttttaaagtatttgcaccttttttattcagttctttct
atagattgtaaaatttgcaagatttgccatagcctagccctacggcaaaa
agtttcagccttaatgactgcagtttttgagaaattccatgcttttcatt
gtttgatctgtcaaagttgaacttgagggaatcaccttttcagtaatgac
tctaaaaagatgattccttaaatgccatgacagaaaatacaacggaaaag
ctattaaaatcgaatccctcacgagcaaatgccaaattacaaatgccagt
tggtctaaacgcagccaatgTTTAATTTATTGAAATCGATAGAAATCGAA
TAACTTGAATATGTTGACAAAAGAGTTTTCTCGACACGAGAGTAAAATCA
CGGAAACATTTGTAATGATTTGTAGCTTACACAatatggtcgtgttcaga
cctgaaagtttaagtttaaggtttaagtagtactttgttgatatgggaat
tcaattataatcacttttcttttgtcatcatccgattggcgatctcgagg
aatctcctttcctaacttgaaatcatgtcatcttctctcttgagatactt
tgaaacaaaaaagatttcagggaatccctctgcaaaacactaattcgtgt
tcgttgaagccattactgctagagatgctccgagcgtctctaagtcataa
atgtcacgttcttttttcttcatttacaaaaggagcatgcttttcactcg
caaattctgatttcgtctattcagaaaactgcaaagaaatcgtaaaaact
tttttttcaaaccagagggtgattcctttttaaacttgggtttaactaat
gagaagcgtgccgttaaatacaaaaggaatataaaagaaacatgtagacc
taattgctttaaaccttggtctgaacacgacctatgTGTAAGTATAactt
gcaattataattttgcTATCAATATGCTTTTTATTATTCTAATTAAGGTG
AACGAATTTCATTGGCTATCACGTTATTATTGGCAATGACGGTTTTCATG
TTGGTCGTTGCAGATATCATTCCGGCCACCAGTGACGTCATTCCTTTGGT
TGGGATTTTCTTTAGTGCTTCGATGATTGAGATGGTGATCATGATCGTTG
TGTTGTGTTATATCATGCGATTGTATCATAAAGGTCCCAATGATCCTCCC
ATGCCTCTTTGGATGAAAAAGTAAGTAGTAGAATactaattcttcttttt
tcaagcattattttttttttaattctcagtAAGCCGAATGCAGAAACCAA
GTTGTTAAGTAACAAAATCCGTAATGGGCAAAGGTGGTCTAACAGATCAC
AACGCCCCCCAAAACAACATCACAACTGCTGAAAAAGTAATTAGTAGAAA
GTTACAAGTCTTTTCTGGGTAAGTTTTTCACGTTCTTTATTCAGCTGAGG
TATTCATATAAGTTTTAAATAGAATTTAAAATAGCTTAAAACTTGATGAT
GAGATGAGAGAAATCGTGAGCAAAACCAAAAAGGTGACATAGGTTTCAGA
ACAACCCAATCAAAACTTTTGACTTCGAGTATTGACAAGGTGTGGAGAGT
TTATTCTTAACCCTTTGAGCATCTTGggaatatttttgataacttttgaa
atatttatccaattgacttgaaattttgtaagTGTGCATCAAGTATGAAT
TGGCATCTTTGATTAAAATTTCGGCATCAttgaatgatgacgtcatcgcc
aTCATTCTTTGCtaataccaaaaatatttttggggcATCGGGTGAATTCT
TTGCTATTTTACAAACCGGCCaaaaattgccatttttttgCCTAAACAGC
CCTAGGATATTGTATCTAGTGATTGGAAAATGCTAttcacttgaaatttt
gacaagtgTTAGATATCGATGATACCAGTTTACAGCCAAAGCTTCAGCAA
AATCAGAAGTGtggttatgctgaaagtgagcattttaggtaaaaaatgga
ccattctgtaaaataccaaccgctCACGagactaaattgaaattttgtac
attGTCTTAGATGGTCAATATCTATCACTGGTGATAATGTCAAGTCAATA
ACTCCAGTAGTTCCTGAGTTCTGGCAGGTggtcaacgtgtattttacaga
ccggtctgcaaagtaccaaataTTCATGAGAACGAACTTTTTCTGTTATT
AGTGTCTTTTAATTGACAAATCAGCCTTCAAGAACGAATTCCAGTCAAAT
CGAACGaatcaatcagtcaatacatgattTGGTCAAGTTTACGCTCTGGT
CTGTAACTAGACAGGTGGCcgaaccaaaattttgcaaatcatctttaatt
atccatatctaccactggtcaaaatttcaaggtcacAGTAtttgtcaatc
ttgagattttgaGATGCTTCCCCTAGTaaaaaaaTAGGAGGATGCTCGAA
GATGCTTCATTCCGCAGTTACAATTCTACCTAATGTTTATAATCACTAGA
TTTCTTTACAAAGGTATATCTATGATTGGCTTTCATACAAGATGAGAGTA
CGTAAACAAAGTAGGAAACAAAGTCTTCAACGAGGATCGTCCCGCAAAGA
CTCATACAATTACCATAAGCTCAACGCTCAAAATGATGAGGAGGACATAG
AACATGTTAAATGGAACAAAAGATCGTTGAATAACATCATCTTTAACAAA
TTGAACAATTACCAACATAATAACCAGAACAACCAGCATCAGGAAGAGCG
ATTGTCACCACTCCTTTTTTACAATCACTTTTCAAACTTCCAACCTTCGA
CTCTTGATAGAAGACAAACTGCACTCAATCCAATGAAAGGTAAAGTTTAC
CTCTTTTACCCAACTAATAACAAAGTTTACCTCTTTTACCCAACTAATAa
caaagccctttggatggtccAACTTTACTTTGTTTTATGATGaactatat
agatgaacccatagtctgcggccgggtcataagattattatttttcatcc
ggctcttttccggaaacactacatttttatattttcgcctcaatcgaaag
tttttttaagcaatttcctggcatgacgactttttttctttttgatattt
ttggaaattatgaatgccaattatgcatccAAAGGGCTTctgatgcgttc
agcttatctactcctcggcgggtgcgacgccgggtgacggctagtataaC
ACTATTaaggatttttttctttggctaaagagagaaagagaaagaaaagg
tcaagtgaaccacggaaaaaagttgatgtttaaacacaaaagaaaatctt
tatccAGGGGGATCCCACTCTCTGAGTATAAGTCCAAAATCATTATGATA
TAATAAAAGCCAAATTCGCTCTGTAAAagcatggatttatcatagaactc
tggatacaCAACGAGCTGGTATTTcatcgatttctcatgttctagccttg
tccgcagtaatgacattattgttcatcCTCCTCCATTCACTAttaatttt
tcgtaaatttctttattgcatttttcatcaaaacacagctatacaattcc
caaatgagacttaaagatctctcaagagagtcaaatgcatcaaattgatt
gctaatgatatgtcgttatgacgaAGAGAAAGATGCgacaaacatgctat
gtataagaaattgaatgttgacaccagaaaatttcaaacttccacCTCGC
CGAAACCACCGTGCCACTgcgtgcctccaaaagattttcatatcactATG
AAGCCAAGATACTGCAGTCTAACATATGTCAATCCTAGCTCTTCccagga
aaaaattggaaagatattgccaaccttattttcagcgtcattctaggctt
tttactcaatttttcttgtttgaatgaagttttttttcacatttaatttc
ataaatgtattcgttaagctttcttgctttcattttcaaagttgcatCAG
GTAAATATACTAAAACAAGAAGTtacaggactttttagaaatgggattat
taatcatttttcaaaatcagggaccttcgagccgccatgacagttgtcct
ttgcggacaaagctagaacatcgattgttttctaaaacaatggaaagaca
atagttcgctctccaccgttttatttgatgtttatccagagttctatgat
aaatccatggtaAAAGTAATAACTTAAAGGTACTCGTTTCAGTGAGAAGA
ACTGGCCGCCACAACCATCAACCACCGCCATTTGGGGTCACTAATCTGGT
GACACGCCCAACAGAATCACAAATCATGCTTAGCAAAATGGAAGCGTTGC
TGAAACACATTCGACAAGTGGAATATCAGAACAACATACGCAATCAATGG
AGAACGGTGGCAAAAACATTGGATTATTGtttgttcatctttttcttcat
cACATAACTAACCACATTTATCACGTGCTCACTGAAGTCGCCAGGCTATG
TTTGGTGATGTAGACAAGAGATATCATCTACCCCTATGCTGTCCATATCA
TAGCAGATTTTTGCCACGGATAGTCATGTGTTATACATTTGAAGCAAATG
TGTATTCTTTCCGATGGAAAATAAATACCATGCTTTAGCTCACTTTAAAA
TTTCGTGTACTATAAACGACATAGTTTTTAGCAAGTGTTTTGCTTCCCCG
TTTCTGACATCAGGCCGTCGTGAAGAATacttaaaatatattgtaaagta
AAGTATGTattaatcgaaaaaaaaaaagaaaaaaa Coding sequence (CDS) from alignment at sc0000007_pilon:734298..739882+ >MSTRG.1486.1.p1 ID=MSTRG.1486.1.p1|Name=MSTRG.1486.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3276bp|location=Sequence derived from alignment at sc0000007_pilon:734298..739882+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGACCGTCATTGGAATGTTGACCATTCTATCTTTCTTACTGCCAGCAGA
ATCGGGTGAACGAATTTCATTGGCTATCACGTTATTATTGGCAATGACGG
TTTTCATGTTGGTCGTTGCAGATATCATTCCGGCCACCAGTGACGTCATT
CCTTTGGTTGGGATTTTCTTTAGTGCTTCGATGATTGAGATGGTGATCAT
GATCGTTGTGTTGTGTTATATCATGCGATTGTATCATAAAGGTCCCAATG
ATCCTCCCATGCCTCTTTGGATGAAAAAGTATATCTATGATTGGCTTTCA
TACAAGATGAGAGTACGTAAACAAAGTAGGAAACAAAGTCTTCAACGAGG
ATCGTCCCGCAAAGACTCATACAATTACCATAAGCTCAACGCTCAAAATG
ATGAGGAGGACATAGAACATGTTAAATGGAACAAAAGATCGTTGAATAAC
ATCATCTTTAACAAATTGAACAATTACCAACATAATAACCAGAACAACCA
GCATCAGGAAGAGCGATTGTCACCACTCCTTTTTTACAATCACTTTTCAA
ACTTCCAACCTTCGACTCTTGATAGAAGACAAACTGCACTCAATCCAATG
AAAGTGAGAAGAACTGGCCGCCACAACCATCAACCACCGCCATTTGGGGT
CACTAATCTGGTGACACGCCCAACAGAATCACAAATCATGCTTAGCAAAA
TGGAAGCGTTGCTGAAACACATTCGACAAGTGGAATATCAGAACAACATA
CGCAATCAATGGAGAACGGTGGCAAAAACATTGGATTATTGtttgttcat
ctttttcttcatcACATAAATGACCGTCATTGGAATGTTGACCATTCTAT
CTTTCTTACTGCCAGCAGAATCGGGTGAACGAATTTCATTGGCTATCACG
TTATTATTGGCAATGACGGTTTTCATGTTGGTCGTTGCAGATATCATTCC
GGCCACCAGTGACGTCATTCCTTTGGTTGGGATTTTCTTTAGTGCTTCGA
TGATTGAGATGGTGATCATGATCGTTGTGTTGTGTTATATCATGCGATTG
TATCATAAAGGTCCCAATGATCCTCCCATGCCTCTTTGGATGAAAAAGTA
TATCTATGATTGGCTTTCATACAAGATGAGAGTACGTAAACAAAGTAGGA
AACAAAGTCTTCAACGAGGATCGTCCCGCAAAGACTCATACAATTACCAT
AAGCTCAACGCTCAAAATGATGAGGAGGACATAGAACATGTTAAATGGAA
CAAAAGATCGTTGAATAACATCATCTTTAACAAATTGAACAATTACCAAC
ATAATAACCAGAACAACCAGCATCAGGAAGAGCGATTGTCACCACTCCTT
TTTTACAATCACTTTTCAAACTTCCAACCTTCGACTCTTGATAGAAGACA
AACTGCACTCAATCCAATGAAAGTGAGAAGAACTGGCCGCCACAACCATC
AACCACCGCCATTTGGGGTCACTAATCTGGTGACACGCCCAACAGAATCA
CAAATCATGCTTAGCAAAATGGAAGCGTTGCTGAAACACATTCGACAAGT
GGAATATCAGAACAACATACGCAATCAATGGAGAACGGTGGCAAAAACAT
TGGATTATTGtttgttcatctttttcttcatcACATAAATGACCGTCATT
GGAATGTTGACCATTCTATCTTTCTTACTGCCAGCAGAATCGGGTGAACG
AATTTCATTGGCTATCACGTTATTATTGGCAATGACGGTTTTCATGTTGG
TCGTTGCAGATATCATTCCGGCCACCAGTGACGTCATTCCTTTGGTTGGG
ATTTTCTTTAGTGCTTCGATGATTGAGATGGTGATCATGATCGTTGTGTT
GTGTTATATCATGCGATTGTATCATAAAGGTCCCAATGATCCTCCCATGC
CTCTTTGGATGAAAAAGTATATCTATGATTGGCTTTCATACAAGATGAGA
GTACGTAAACAAAGTAGGAAACAAAGTCTTCAACGAGGATCGTCCCGCAA
AGACTCATACAATTACCATAAGCTCAACGCTCAAAATGATGAGGAGGACA
TAGAACATGTTAAATGGAACAAAAGATCGTTGAATAACATCATCTTTAAC
AAATTGAACAATTACCAACATAATAACCAGAACAACCAGCATCAGGAAGA
GCGATTGTCACCACTCCTTTTTTACAATCACTTTTCAAACTTCCAACCTT
CGACTCTTGATAGAAGACAAACTGCACTCAATCCAATGAAAGTGAGAAGA
ACTGGCCGCCACAACCATCAACCACCGCCATTTGGGGTCACTAATCTGGT
GACACGCCCAACAGAATCACAAATCATGCTTAGCAAAATGGAAGCGTTGC
TGAAACACATTCGACAAGTGGAATATCAGAACAACATACGCAATCAATGG
AGAACGGTGGCAAAAACATTGGATTATTGtttgttcatctttttcttcat
cACATAAATGACCGTCATTGGAATGTTGACCATTCTATCTTTCTTACTGC
CAGCAGAATCGGGTGAACGAATTTCATTGGCTATCACGTTATTATTGGCA
ATGACGGTTTTCATGTTGGTCGTTGCAGATATCATTCCGGCCACCAGTGA
CGTCATTCCTTTGGTTGGGATTTTCTTTAGTGCTTCGATGATTGAGATGG
TGATCATGATCGTTGTGTTGTGTTATATCATGCGATTGTATCATAAAGGT
CCCAATGATCCTCCCATGCCTCTTTGGATGAAAAAGTATATCTATGATTG
GCTTTCATACAAGATGAGAGTACGTAAACAAAGTAGGAAACAAAGTCTTC
AACGAGGATCGTCCCGCAAAGACTCATACAATTACCATAAGCTCAACGCT
CAAAATGATGAGGAGGACATAGAACATGTTAAATGGAACAAAAGATCGTT
GAATAACATCATCTTTAACAAATTGAACAATTACCAACATAATAACCAGA
ACAACCAGCATCAGGAAGAGCGATTGTCACCACTCCTTTTTTACAATCAC
TTTTCAAACTTCCAACCTTCGACTCTTGATAGAAGACAAACTGCACTCAA
TCCAATGAAAGTGAGAAGAACTGGCCGCCACAACCATCAACCACCGCCAT
TTGGGGTCACTAATCTGGTGACACGCCCAACAGAATCACAAATCATGCTT
AGCAAAATGGAAGCGTTGCTGAAACACATTCGACAAGTGGAATATCAGAA
CAACATACGCAATCAATGGAGAACGGTGGCAAAAACATTGGATTATTGtt
tgttcatctttttcttcatcACATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:734298..739882 + |
|
