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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000126_pilon:281900..291096+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14832.2.p1 ID=MSTRG.14832.2.p1|Name=MSTRG.14832.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=9197bp|location=Sequence derived from alignment at sc0000126_pilon:281900..291096+ (Clytia hemisphaerica_ch_hm2_pilon)
CTATCTGCCTTCGATAGCACTCTTGATGATAGTACAATCTTTTAGAATGG
AGTTTTTAATCTATTTGATTGGGATATTTTCAATTGCAGTTTTTTCGACG
AATGCTTCATCTTGCCCGTAAGTATATAAAgtcaatgttttattttttgt
ctcagacattttttaaagaagaattCGCTGAAAAATTgttggaaaatata
tttattttagcCATAACTcccccccccTTCGTACAGACCCCGTGAGATTT
AATttgccagtgggggtaaaaataccGAACCAAAACTCaacggggattga
tatttccattttgctcatgactggggatttgaatCTCATATTGTTTTTGa
gcaagaaaattcagtgggatggaaaaaatagcacaataatttgcagtgag
gattggcttatctgattatttccagtggggacaaaaattggaggacaATT
TTCCACCaggaacgatattttggtcaattttttccaatggaAAGGCTTCC
CTTTAGGGCTGTGAAAAGGGAGCTATAATTTGAAATGATGAAAACCAGAA
gcttatcatgtttttatttaaaaattggaTATTCGAACTTCATAAAAAAG
GTTACTCGGCAGACTGTAAAAATCTATCAACAAGATAAgatcttaaaaaa
attatatctagTTAATAAAATTAGAAAGTTAACTATATAGAGAGCGAGTT
GATTGGATTGGTTTGTATAGGGCCCGGGAGGGGGTACTAAGGCAAAATGG
GTTAAGGGGATGCGCCGCTGgacagggtaccttttttaacctccacgagt
cccaggtagggttgcaaaaacaccaatatagaaaaatcagtccctcgcag
ggtgcctatttttggaaaatttgcgggaaaagtagaaaaatttagaaaat
tttggaatttcagtcccattcagggtcacttttttcgcaaatttccgCAA
ACAAACCAGTTTAATATTTCCGTATGGCTGCTATAGATGAAGAAAACTCG
TACCTAGAGCGACTTGCACcccttttttgttattttgttactGAGAACAA
ACAAAATTCTATCAAAGTTGGTATCGAAGGTACAGGGttcatttttcaac
catttCTCAACCGTTACAATCAATCCCagaaatgggctattccagaaaaa
atttgcacccaactttcgaccctcggagaaaacaaagaaatattttgtga
attttacgacccttaccgggataaatttgaccaattttgaccaaatttcg
atctttctgggcgtaaaaagttgaaattttcctatttctcctacccttag
tgggactgaaattagattttctaatttttcagactTTGGAAATcctaaaa
aggtacccttaagggcaacacataccgtaccctccatttagctaacacca
cccccccccccgggatttgcacccctatgttgaggaggtacTATTTGGAA
AGGTGTCCTcctgaattttttaaaaaaatttcaggaccAGCATGGACttt
caacctcattttactgaaGGATTTTTACACTCGGCAAGGAGACACCCtga
gttttttattttccaaagcaccatagacctcctcaacatagggggtacag
actatttctggaatagcccaatctgttatattcatttttcaaagcCTGTA
ATATTCATATTGAATTGGATCATAAATCTTATTAAGGATATCTTCTTAGT
CGATTCTCTAGATATTTATGAACTCTGCTCTAGGAACATACcagttaaaa
attttcaatgaaatttgatgtcctaaattttttaacgttttaGCCTAAAA
GTGTTCCTAAACATTCTAAAatcactattttgtgagtattttgatgtgat
ttttgttttagagttcgTAAAGcttctcaaaatgttcttaattttttctt
aatatcGTGGCCATCAAACCCTTTTGTTCCTATAAAGTATGTTCTTAGTA
TAAAGCAAGATTTGATAGGATAATGGTAATTTTATCACTGTCCCTTCAAA
CAAGCATCATAATCCTGCCCCATGATGAGCATCAGTTTAATGAAAGTTTT
TGTCTGGTATGTCAAtctggcccggggggggggggtactaggtttgcgag
gtgacgggtatgtccgagccgaaaatcaaaaatcgaccctttgagagaca
aatggtgattttgggaccctttgagagactttttcctaaattttggtcca
ctttttccaaattttggtttgattttcaccaaattttggtcaaaattttt
ggaaatcgtgatcctttgagagagaaatttttgattttcgtgattttggg
accctttcagagactaacttttgaatttatacccctttgagagacttttg
aggaatgagaaaaggtacccttatggctcgcacatacccggcacccattt
tgcctaagtaccccccgggcAATCTGGGTATGCGTCcctcttttttataa
attattgaGAGTCGTCTAAACCACATTGAGGTTTGCTGGATTCACGGTGT
CCCCACTGCACACACAAATGACCTCAAATCATGAAGAACAGTGAAGAAGA
TAGTGCTCAATAACAAGTAGAGCTAAATCATTTCATGTATTTCTcttcaa
atattaaaaacaaacattacaCTGTGTTTCACGCACAAGGCGATCATCAG
ATGtggataaaaatttttctacGAACAAATTCTACTTGTAGAAATCGAAA
TACCTAGTCCCAAAGGGAATATCTAAATAAAGCgttaaaatataaaacat
aataGGATAGTGATTACATAATGTACAtgattaaaaagttgaaaaggtgC
ATATAAAACTATCAACTATCAACGACCCGGGCAAATTTTACATTGGTCTC
ACTGGCAACACGTTCAAGGATCGTTGGAACACACACAAATACACACTGAG
ACACGAAGATGCTACAAGCCACACCCAGCTCTCAAACCACTATTGGGATT
TGAAAAGATCAGGCGTCACTGACCCAATTCTCTCCTGGGAAATTATTGAT
CAAGCTGCATCATACAAAAATGGAACAAAAACGTGCAACCTTTGTTTGGC
AGAAAAATTTCACATTGGCTgtgtttagaccagcctggcgtTTGTAAtag
cttgcagtattcttttgaattctattgttccgcgcaattgttcggtttgt
caaatgcctaatgatgccagcgtgttggcattacgttggcatttgaaatg
ccattttgagcaaaggaatccccttttctggcatttcaaatcaaacaaag
gaaccaaaacaaagagaaaaaatgacatttttgaatttttatttgcacgt
tttttattcagttctttctatagattgtaaaatttgcaaaatttgccata
gcctagccctacggcaaaaagtttcagtcttaatgactgcagtttttgag
aaatttcatgcttttcattgtttgatctgtcaaagttgaacttgagggaa
tcaccttttcagtaatgactctaaaaagacgattccttaaatgccatgac
agaaaatacaatggaaaagctattaaaatcgaatccctcgtgagcaaatg
ccaaattacaaatgccagttggtctaaacgcagccattatCACTTCCAAA
CGCAAACTAGTgaacaaaaaaactgaattagTCTCTAAATGCAGGCATAC
AAACAGATTCATTCTAAAGAACTATAAATCAGTCCCTCCGGACAAATAGC
TTTTATATGcaccttttcaactttttaatcaTGTACAATATGTAATCACT
ATCCtattatgttttatattttaacGCTTTATTTGGATATTCCCTTTGGG
ACTAGGTATTTCGATTTCTACAAGTAGAATTTGTTCgtagaaaaattttt
atccaCATCTGATGATCGCCTTGTGCGTGAAACACAAATGACCTctattt
ttacacttttttctattgtttataggtgcgaaaaaaagactgagatagtt
ttagggtggtaaaacagacGAAAAAATTACCAcgcagcaattggcggcta
cggttgaaaaggtgtagtGCATTCCATGGCACGTTGTACCTTTCTTAAAA
ACACCCGCATTTTTTCTCTTCGAGAAAATTTCTAATTAATCTCACTTTAT
GATCTTTAGAACTCGTTCCAATGTTATCACATTCGATGACATCAAACACT
CAGCGCGAGCGTCAAGAGAAGTCTACAAAGATGATAAAGCAGTTATTGGC
GCTACAATCCGCAAAACACCATACAAGATTGTAAGAGTTTTTGAAGAAGA
ATTATTTGAGAAAGGAGAAGGAATTCGTGTGGCGATTGCAGATCATGGAA
ACACAAGAATGATCATTTTCAGAGGAACCGACGGGTAACATACTGATTTT
TTCATGTTCTTAATGggttattccagaaaaaatttgtaccccctatgttg
aagagatctttttttaagaagataaccccctggatttttttccaattttt
caggacccccttggatttttttctcccatttttttggaccaccctggatt
ttcgacctcgttatacttaccaccctggattttcaaccccgggggggggg
tactagggttggcgaatgaggggtatgtgcggacgggacctccgaaaacc
gacccttagagagattgatttttgctgaaaaggtgacccttagagagact
ttattacaactttttctctggaaatcaaaagatttcctaaaaatcctgat
ttttccgatccttagagagactttgaaagatgaaaaaaccGACACATAGc
tatcatccatttttgcctaagtacccctcccccggGTTTTCAACCCAATT
TTACTGACCACTCTGGATTTTATCATCCACCTTGgagtttttattttcca
aaccaCCCTGGAAGTCACAtttcctcaacatagggggtacagactatttc
tggaataaccTGCAGCCATAGTTCGGAGGCACACAACGGCTTCTCCCTGA
ATTCCTCAAGTTACCCTTGATCATTGAGCATCAAGAGGCATCAACCTTAC
TGGAGATTGAACCTAAGCCTTGCACTCCTTTAGCACCACAGAGCGCTGTT
CTTGATAAGTTTAGAAATTAAATTACAAAtataatcataaaatatgaaGG
ACGGGTGCAATTGaatttgttttagtttttaaacACATCGGGTGCTACCA
AATggttgcaaaaaaaacaaagaaactgaACTACCAATCTTGAACTtgct
tctttctttttcaagccAGCCTCATTCAGCTTCTACGCGAGGGAGCAAGA
TGCAAGAGTCCAAAAACATAGGCTAATAGAAACCAAAGTACTAAAAGGTT
TATCGGTATAGttatggacaaaatatttgggaCAAAGGGGATCtccctgc
aaaatttcaaacaccacaaatgatttttaagtgcgTTAAACTACatttgg
aaagtagagttttaacatgagacttgagacttaggaccttaggatctcaa
gatttaaaagttcaaatttttttttcaaaagaagccaccgaaccccttca
aaatcgaaatattcaatgaaagaaagtggaagtgctaaaataacAATCCT
GGtccaaactttaaattctgaaaaacgctagaatacactaaaatgtcaat
atatttcaaccatgattgtagttaaatttttcctttttccaatCTAGACT
CACCCAACTTCTACGCGAGGGAGCAAGTGTCTTGAAAGGTCAGCATGAAA
TCAATTATGGACAAAACAGAGTTCAAGTTCTCAAATTTTTCTGGTCAGCT
TTTGAGTTGGTTTACCGGTACACATTACCGTATATTCAAGATCCGAAACG
GAAATACATTATCACTGGTCATTCCCTTGGAGGTGCATTGGCCTCAATGA
TGGCAATAAAGGGAGCTGTTTATCATGTAAGCTGTGTCCAATGTCGTTAT
GCGTAATTTCCTTTTCTGTTTGTCTTTGCgtgattttagttttttattcg
TCAGAGGATAAACTATGGGCGTGATAAGGggtcattgatttcaaagcccc
ttTGGGCCTAGGTTTTTTAATAAAAGGAGCATGTTTATCATGTGAGTTGT
TTCCAATACCTCTGGACATTACTAACCAAATCTTTTAAGAGCCCTACCCC
AGCGAATTACATGATTGGGACCTATTTACATTCTATCATGTAATCAAGAT
TTTAGCGTGATGCATGATAGGACAAAACATTCGAGGGTTGATATTTGATT
TGGGCTTTTGTTCCCCTTAATGATGAACAATTTTAGTGATTGTTTTTTCG
TGAAGAAGAAAACACGGGGATGATGGGGCGATGAAGAGTgtccgtggggg
ggggggcttttttaaAACCCTTTATATGACTCTGTAGATCTTTcctaaaa
gttatgtttttgatgtttttgagcTATTCTAAATTACTTTGGCCTAGTTC
ATTGCTCCCTGGAGCAATTTCAAagcctcaaaaaattttttaaccctTAG
CACACATATTCTTtgacaaaatttcttttcatataTTTCTAGTAATTTCC
AATGgctaaatttagaaatttcaaagctCTTTTGAAAGTCTGAAAATAGG
TTTCTAACTTTTTCCCTTTGCATATGACTTCATTGTATTTATGAAAGCTT
TTTACTCCAGATTTCTAACAAAGATACCTGTTTTGCCTAAAAGCGGCATT
CCAAGGTGATAAAGAAGAGAAGTGAAGATTTCACATTTCCtaatgcattg
ctctgattactccaATGACAGACCTGTAATGTTTGACCTAAACTTACTTC
CAATAAACCATAAAATTTTGTGGAGAATACTTCTCTATGGGGAAGCAAAT
TTCAGTTTTACTTCAAATTATGCCATATCAAGCATAACAATAAAATTCAT
TCGTGACACCGaccgttttgggggaccgttgtTTTAGTTTGCTTGCTATA
CGCCTATCCTAAGGTTATAAGGGCTGATAAAATGGCTTTTTGTAGCGTAA
AATTAACTTAGATTGGTAACTAGGCTAAATTAGATTTTTCACTTAGTTAc
ctcaatatttgaaaataaatattagaCTTTTGGATAAAAACTTTGGTCGA
AACAGTTTTGAGAAAGAACATTGAGAAATAGAAAACGTCGAGTAACCATA
CATGATATGGCTAAActaatttgattagttgtttcacgagcccgaccgac
cctgaaatcccaaaaatcgaaataagaattaaattaaatttgcagtagaa
catttttatttcattgctTTCATTGCTTTAAAGACTGTCAagttggtagt
ttttccaatgttttgagaattttatgttcgattttatcaaagaatttgat
ctttttgtgtctttttatttaatatttcgcacttttgtcaagatgtagtt
gtttttgctgcctttttaggagattttaaaggtgaaattctacttttatt
ttaattttttcgccGACCAACCGActctcttttttgggtagcttggcccg
taaaacaacaaattagatTGGCCTCGCATTAGAAATTGATAATCAATATC
AAAATAAGTactctaaaaataaaatcatcctAATTCGAACTCGCTTAAAT
GTTAACAAAATCTCTGACACCATGACACCATTTGGTAAATCTCTCTCTCT
TTATACAGTGTAGTCTTCTTAACTCAAAcatctataactcgaatgtcttc
ttaactcgaacacgtTTCATGGTCTTTTTTGAAGATTGCACCAACACGAA
GCACCGTGTAACAATtgttagacgatcctatcgtctacacAagaTCACTT
AAAATCGCCCACTTggggcggagtaagcagtggtgGAGGTGTTTACGTTT
GTTTCAAACTCTACCGCCGCTGTATTTTCCATTAACCGCCCTAACGCCTT
GACTCTTCTGCGCATATATTATCCCTCGTTTACTATCgctctaacggacg
atagcatcgtctaaacGATTGTAAGTTACACAATTGTAAGTTAGCAGTTC
TTAATTTCAGGAAGATTACGCTCGATTTTTTGTGAGTTTTCTTAGAATTA
TTTTTGATTCTATCTACTTCACTCATTTATTTTGTATAGAAATCTTTATT
GGCAAACCCTCAATCGAGTTTGATAACATTTGGTCAACCACGAGTTGGTG
ATGCAGCATATGCTAAACTCCATGATCAAATGGTGCCGACATACCGAAAA
ATCAGAGTAGTTTTCATGTCTGATCCTGTCACTAAACTCCCTCCTTATGT
GGCTGGATACAGACATCATTCTAGGTATGTTCCTAGTCATGGTAcgcatc
actgcaatgtcttcgacATCACCCCATAGAagcaacagctgattggttgt
aagtgacataagatcagtcaatacgtcacttgcaaccaatcagctgtcga
GTCCCTGTAATGTTAGGAGACAATGGTggcaatggtgcatattatgaatt
tctttaatgggataaattctCACGAGTTCTATTTTTGCGTTTCCGCCGCA
AATAttgctgttttttttgtgttttcagagccatttttgactgcattttt
tGACTGATTaaaaaaaTTCGATCTTTTTAGTTCGCGAAATATAGTTATTA
TTTTCCCAGTGAACTGTTGTTATGGTGGACTGTTGTGCATCCGAACATCC
TGTCATTTGAATCTGTCGGTAATGTAAAGTAATTTTCAGTTCCCTTCTCT
TCCATATTTCATTATCTCTTCCATATTTCATTATAGAGCTGTATATTTGG
GTCGTGGACTATTCAGTTTTTGGGGTAAGAAGCGAAGCCTGGTAGAACAA
GAAATCCAAGACGAAATTGCAGACCCTGACTTTGAAGACAACGTCGATTC
TGCTGATAATGGTTACATTGAACCAAGAAGTAAACGGTTTTTCTTCCCAA
AGAATTATTATATGCAAGTCTGTGAAAAAGGAGAGGCTAAATCATGTGTC
GTCCATCTCAATTCCATTGCTCCAAACCTTCTTCATCACGCCATGTTGTT
TTATAGTAACGCTTTGGAAAGTTCAAGTCTCAAATTTTGGACTATCAAAA
GTGAACGAAAATCAAGTTGGGAAGATGCTTTTATTGCAAGCTGTCACGGA
GAATAACTTTCACTGGATCCCTTGGATGCGGCTGaaatcatacacgtttt
tttataagaaaatcatttttgaagccttcggatgtcctTAACTTTTTAGG
TTATAAGTcaaaaaactttcttaaaatgttcttattttctccctttt Coding sequence (CDS) from alignment at sc0000126_pilon:281900..291096+ >MSTRG.14832.2.p1 ID=MSTRG.14832.2.p1|Name=MSTRG.14832.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2268bp|location=Sequence derived from alignment at sc0000126_pilon:281900..291096+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGTTTTTAATCTATTTGATTGGGATATTTTCAATTGCAGTTTTTTC
GACGAATGCTTCATCTTGCCCAACTCGTTCCAATGTTATCACATTCGATG
ACATCAAACACTCAGCGCGAGCGTCAAGAGAAGTCTACAAAGATGATAAA
GCAGTTATTGGCGCTACAATCCGCAAAACACCATACAAGATTGTAAGAGT
TTTTGAAGAAGAATTATTTGAGAAAGGAGAAGGAATTCGTGTGGCGATTG
CAGATCATGGAAACACAAGAATGATCATTTTCAGAGGAACCGACGGACTC
ACCCAACTTCTACGCGAGGGAGCAAGTGTCTTGAAAGGTCAGCATGAAAT
CAATTATGGACAAAACAGAGTTCAAGTTCTCAAATTTTTCTGGTCAGCTT
TTGAGTTGGTTTACCGGTACACATTACCGTATATTCAAGATCCGAAACGG
AAATACATTATCACTGGTCATTCCCTTGGAGGTGCATTGGCCTCAATGAT
GGCAATAAAGGGAGCTGTTTATCATAGCTGTATATTTGGGTCGTGGACTA
TTCAGTTTTTGGGGTAAATGGAGTTTTTAATCTATTTGATTGGGATATTT
TCAATTGCAGTTTTTTCGACGAATGCTTCATCTTGCCCAACTCGTTCCAA
TGTTATCACATTCGATGACATCAAACACTCAGCGCGAGCGTCAAGAGAAG
TCTACAAAGATGATAAAGCAGTTATTGGCGCTACAATCCGCAAAACACCA
TACAAGATTGTAAGAGTTTTTGAAGAAGAATTATTTGAGAAAGGAGAAGG
AATTCGTGTGGCGATTGCAGATCATGGAAACACAAGAATGATCATTTTCA
GAGGAACCGACGGACTCACCCAACTTCTACGCGAGGGAGCAAGTGTCTTG
AAAGGTCAGCATGAAATCAATTATGGACAAAACAGAGTTCAAGTTCTCAA
ATTTTTCTGGTCAGCTTTTGAGTTGGTTTACCGGTACACATTACCGTATA
TTCAAGATCCGAAACGGAAATACATTATCACTGGTCATTCCCTTGGAGGT
GCATTGGCCTCAATGATGGCAATAAAGGGAGCTGTTTATCATAGCTGTAT
ATTTGGGTCGTGGACTATTCAGTTTTTGGGGTAAATGGAGTTTTTAATCT
ATTTGATTGGGATATTTTCAATTGCAGTTTTTTCGACGAATGCTTCATCT
TGCCCAACTCGTTCCAATGTTATCACATTCGATGACATCAAACACTCAGC
GCGAGCGTCAAGAGAAGTCTACAAAGATGATAAAGCAGTTATTGGCGCTA
CAATCCGCAAAACACCATACAAGATTGTAAGAGTTTTTGAAGAAGAATTA
TTTGAGAAAGGAGAAGGAATTCGTGTGGCGATTGCAGATCATGGAAACAC
AAGAATGATCATTTTCAGAGGAACCGACGGACTCACCCAACTTCTACGCG
AGGGAGCAAGTGTCTTGAAAGGTCAGCATGAAATCAATTATGGACAAAAC
AGAGTTCAAGTTCTCAAATTTTTCTGGTCAGCTTTTGAGTTGGTTTACCG
GTACACATTACCGTATATTCAAGATCCGAAACGGAAATACATTATCACTG
GTCATTCCCTTGGAGGTGCATTGGCCTCAATGATGGCAATAAAGGGAGCT
GTTTATCATAGCTGTATATTTGGGTCGTGGACTATTCAGTTTTTGGGGTA
AATGGAGTTTTTAATCTATTTGATTGGGATATTTTCAATTGCAGTTTTTT
CGACGAATGCTTCATCTTGCCCAACTCGTTCCAATGTTATCACATTCGAT
GACATCAAACACTCAGCGCGAGCGTCAAGAGAAGTCTACAAAGATGATAA
AGCAGTTATTGGCGCTACAATCCGCAAAACACCATACAAGATTGTAAGAG
TTTTTGAAGAAGAATTATTTGAGAAAGGAGAAGGAATTCGTGTGGCGATT
GCAGATCATGGAAACACAAGAATGATCATTTTCAGAGGAACCGACGGACT
CACCCAACTTCTACGCGAGGGAGCAAGTGTCTTGAAAGGTCAGCATGAAA
TCAATTATGGACAAAACAGAGTTCAAGTTCTCAAATTTTTCTGGTCAGCT
TTTGAGTTGGTTTACCGGTACACATTACCGTATATTCAAGATCCGAAACG
GAAATACATTATCACTGGTCATTCCCTTGGAGGTGCATTGGCCTCAATGA
TGGCAATAAAGGGAGCTGTTTATCATAGCTGTATATTTGGGTCGTGGACT
ATTCAGTTTTTGGGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000126_pilon | genome | sc0000126_pilon:281900..291096 + |
|
