MSTRG.14829.1.p1 (mRNA) -

Overview
NameMSTRG.14829.1.p1
Unique NameMSTRG.14829.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000126_pilon:265160..267540+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14829.1.p1 ID=MSTRG.14829.1.p1|Name=MSTRG.14829.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2381bp|location=Sequence derived from alignment at sc0000126_pilon:265160..267540+ (Clytia hemisphaerica_ch_hm2_pilon)
TATAATGATTTGTGCTCATAATCTATTAAATAAGAGATTTGATCAAACAT TCTGACATCTCTTGCCTTTTGTCAACAACCTACATCACATCTTATAAAGT GTGTTTCGGTGTGTTTTGTTCGAGAAAGATTGTCAAAGAAGAGGTGAGAA TATTTGATATCATAACTTTGGTGGTTAAAATACCGTCAACTATGGCGAAC ACAGTTTGggttttattgttgttttctGCTTTCTTTGTTACACATGATAC TAAACCCATACCCAAGAATTGGTACCGAAAAATAGGCCCGAATGGTCAAC CAACTGAAAAGCCAATAAACCAAGCTACAAAAGAAGCTGAAATTCGAAGA CAACTTGATAGTTTGAGAAGCCAGATGGTTGCATTAACACAACAATTACC AAACAATGGTGGATTATCATCTTCAGAAAAACAGCGTTTAAGTAGTAATG GTGTTGCGAATTCTGGAGATGACCCGTTGAATGTGTTCTGTTATTATTAC TTTAGCTCTGGTTTCAGTAAAGGACATGCTTCAAATTCGGATTCTGGTAG CACTATTACAATCAACAACAGCACAGAGCTTGTGGTTGATATATGGGTCA AGAAGAATGGAACAAGAGTTGCCAGTGGTTTGCAAAGTGATTATAATTCG CTTTATTACCCAGgaattttcgatttcttggCTTCTTTGACCACTCGTTG TTTCTAAACATTTGAAGCAGATTCACCCGCCACTTTGACATTCATTCGAT AATATTGGAAGAAGAATCTACGAGATAAATATTTAATAAACAGTACAATG TGTTTTATTAATAGCATTATAGCAGTTGTTGTAGTGCAccactgtgtcac agacccactggaaccccaGCGCGCCCCCTAGAaagtttggcaaaaatttc gtccccggtggtaaaaaaacctGTAATTTCAGGTCCACTGGGAAATTGTc gtccccattcgaaattccatgtttaaaaattgcactttaaAACCACCATC actagattttttaaccttggaacaatagaatttctatccccattgggatt tcaattggaatttttatcaccactgaggaaaaaatttccaccggggctgt gagacaggggtgttgtagTTGCACAgaactacaaagaaaaagaactgTAG GTGAACTTTTGACCTTAAAACTCATATAAGTAGCAATAATTGTTTAATAT ATTTTCATACCTCTACTTTCTATATCCAACCTTTGGACTTTTTAGCATCT TGATCAACCTGATGTACTCTTTCAACTTTGGTAGTAATGATTTTGCAATG GATAATGATTTTCCCTATATACAAAGCTATACTTATTGTGTGTTTTCTCT AGAACTAAAAATTATACTGTTACAGAGCACTCAACAAATTGCACACCCTT GAATTGCATTTTGGGTAcacctttcttttataagaacaaattatataaga acaatttaagaacattttaaggatttgtggactctaaaacacccaatttc ttaagaaaatggacaaaaatactcaaaaaattgtgaaaataaaagttaaa aatatatgaaggcttaaaaattgtttggatgttctcataaaaaaagcgtT TACTTCAAAAATACACTCCTAGGGTCCGCATTTTACAATTGGTTATTTTA CCTGGCTGCTTCCTACTTCCTACGCTAAATCatttaatttagaatattcc tatagtattctcattattataataacattatcatttatattttatttcgt aagttttaaaatcataatttgatacataaaagtgaaaaatttgatactcc gtagtgttttgaaaattttattggaTTTCATTGCTTTGATACTGCCTTTA GtctagaaaaataatatcgCTAAAAAGTCAAGGGTCAAAAAACTCTTTCG ACTTCTCAAATTCTCAAAAGTAATTTTCCTCATTATAGTAATTCAAGTAT TGTAGAACTCTTAACAAAAACAAGGGGTTAGAACGAAAAATTAACCCTGC AAGAAATTTAAAGTGTAATAAGATAAATTATATATAATATGGTTTATTTA atggtgaaaaattaatttatcaaaaatttcttcatctcgtttcttttctt taaccctGACAACTACGGTGTATTATTTTCTTCaactgattaaaaaaatt aaaaaaacaataaaaaaaaaaaaatttcttgacaCTTTGTATCCTAAATT ATTTACAAAGAAATATATAATAATTGCACGAAATATGCAGTGTTGTTTTG TAGACCATTAAGGCCTAAACCCCCTCAGAAAATCTTATTGTCAACCAAAA GCGTCGGGATAAAAGTCTTGGGGTATTgacagtttttttgaaaatttgtc aatttgGTGGCCCACCAGGATGGTGGAAATA

Coding sequence (CDS) from alignment at sc0000126_pilon:265160..267540+

>MSTRG.14829.1.p1 ID=MSTRG.14829.1.p1|Name=MSTRG.14829.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=516bp|location=Sequence derived from alignment at sc0000126_pilon:265160..267540+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGCGAACACAGTTTGggttttattgttgttttctGCTTTCTTTGTTAC
ACATGATACTAAACCCATACCCAAGAATTGGTACCGAAAAATAGGCCCGA
ATGGTCAACCAACTGAAAAGCCAATAAACCAAGCTACAAAAGAAGCTGAA
ATTCGAAGACAACTTGATAGTTTGAGAAGCCAGATGGTTGCATTAACACA
ACAATTACCAAACAATGGTGGATTATCATCTTCAGAAAAACAGCGTTTAA
GTAGTAATGGTGTTGCGAATTCTGGAGATGACCCGTTGAATGTGTTCTGT
TATTATTACTTTAGCTCTGGTTTCAGTAAAGGACATGCTTCAAATTCGGA
TTCTGGTAGCACTATTACAATCAACAACAGCACAGAGCTTGTGGTTGATA
TATGGGTCAAGAAGAATGGAACAAGAGTTGCCAGTGGTTTGCAAAGTGAT
TATAATTCGCTTTATTACCCAGgaattttcgatttcttggCTTCTTTGAC
CACTCGTTGTTTCTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14829MSTRG.14829Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14829.1.p1.exon1MSTRG.14829.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14829.1.p1MSTRG.14829.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000126_pilongenomesc0000126_pilon:265160..267540 +