MSTRG.14819.1.p1 (mRNA) -

Overview
NameMSTRG.14819.1.p1
Unique NameMSTRG.14819.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000126_pilon:110266..112469-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14819.1.p1 ID=MSTRG.14819.1.p1|Name=MSTRG.14819.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2204bp|location=Sequence derived from alignment at sc0000126_pilon:110266..112469- (Clytia hemisphaerica_ch_hm2_pilon)
TTTACAATTCTGAATTTGGACATTAGATGTTTTCATGAGATTTAGCTCAT
TGATCATCCGGTGAATAATGTTCAAAATGTTAAGAACAAGTCCGATTTTA
ACGGAAAATTTTCCCGATTTTCTTAAAAATTCTTAATACCCTCAAATGTT
CTTTAAAAAACGTATATTTGCAACCGAAGCCTTATCCGAGCTGGCACACA
ACGTTCTTTCAACGTTTACAACGTCCATATAACGTTAAAAGAACGTTAAC
GTTGTGTGCCAGCTGGCATTGTTCTTATATATAAGAACAAGCTGTAAATA
ATGTGTTTAGAGTCTACTTTATTTTTACACATTTGTATAGATCCAATCAC
AACTAAATGTGTGGCGGCACAGTTTGACAACGTAGGAAATATAACTGGAT
GTTTGAATAAAACAATGGATCAATTTTGTGGCATCGACATTGATGCTACT
GCATTTGGAATTAACTATAAAGCGAAGGTAAAGGATTTAAAGGTTTTATT
TTTACATAAGTGTTCCCGTTTCATATCAGACACATATTTCATGTTAGGAC
AGTGTCTTCCTATTGTTATTTTATGCTAATACAGTTGACGCTCTCTAATT
CGGCGTTCTACTATTCGATAGACTCCCTTATTCGATGAAATTTAAAGTCC
CCGTCAACAAGAAACACTCATAAACGACGCTCCCTTATTCGATAAGCTCC
CTTATTCGATGAAAATCCAATTCCCCTTGAAGATCGAATTAGAGAGCGTC
AACTGTATAAGCCAAAAAATGTTTTTCTTTCCCTCTTTCTGACCAATCTT
GCTCCACATCAATGTCAATCCAATGTGAAAAAGCTTGTGAATTAAAACTG
ATGAGTAGGCGATACCAATTTAATTTGTTGTTCTACGGACAGATCGTTAT
CTGTCGGCAAAATAAGAATAAATTCTTCATTTATCAGGGTTGGTAAGGTA
CCGAGAAAATTTTCCAAAAAGTATCTGGATCAAAAATTCACTTTGTTTTT
TATCTTCCATGATGATCATAATGAAATTTAAGTGTATGCAATGCTTTTTA
TGATTTTTCAATTTCTTGAATTAATTTTCAGCTTTGTTCATATTTTAATT
CTTACAAATAACTAGTGTGTAAAATATATTGTAGTGGAAATAAATAGGGT
CGGTCGGGCCCGTAGAACAACAAGTTAAATTGGTCTTGCCTAAGCAAATG
ATATCACTCTTATTTAAAATCAAAGCCTTTAAATCACGTTTTGACAGCTA
GATCGGAATAACGGTACCGCAATACAGGGTGTCCGGAAAAAATGTATCGA
CTCGTACCCAATGAAGTATAAGCCCGAACGGCTTGAATTCAATCTCCTTG
GTAGGATTTGAAGCCAACAGATCCTACCATAGTTGGCCTTGAGCGGCTCG
TCTGATTTTTACACAAATGACAAATTGAAACTAAAATTTACTGCTAAATT
TCGAAAAAAATATCAATCGTAAACAAAGGAATTGCTAGATTCAATCTGTC
GTCAAAAATGCGGCGCATTTTTTAAGGCTTCACTTTTTCTTGCCTGAGAA
AGGTTAGAGATTGAACTCTAGCCCTTCGGGATTTAAACTCAATGGTCGCA
CTACTACTTCTACAGGGTGTCCCTGATTAAAGTATCGAGTCGAAACACAA
CTATGAGTAGAAAGTTTTTTGTGCGTGTTCACAAAATTGTATTTTAAGCT
CTCCCTCTTTTTTCTTTGTCATTACGATTAATTTATACGTTGTAACTACC
TTTTGTAATAAGCCTGTGTGATGGAGAACGCTCTCATATTTTAGCGATAA
CACACACAAACTTTTCTACTCAATCGCATGTTCAAACTCGATACTTTAAT
TAGGGACACCCTGTAGATCGGAATAACGGTACCGCAATAAACCTTTTCAT
AGATTATTCGTATTCAAGCAAATTTCAATAGTGATCACATCCCTTGAGAC
ATTTTTTTATGAAGAGAAAGTAGTTTTAATACTACTTAATAAAAAAGCGT
GTCAAAAAACGACAAAATTTCTTATAATATCACAGGTATGCTGTTGTGAT
AAAGACAATTGCAATGATGAAACTTTTATACAATCTTGTTACAATGGCAA
GCACAACGAAGAAAGAAAGTTCACTGGACTGACTTGTCATCAAAGCGTAT
TAACGAATGAAGTTGTGAAGATAAAATCTTCAATTATGCAGTGTAGTACA
TTTA

Coding sequence (CDS) from alignment at sc0000126_pilon:110266..112469-

>MSTRG.14819.1.p1 ID=MSTRG.14819.1.p1|Name=MSTRG.14819.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=690bp|location=Sequence derived from alignment at sc0000126_pilon:110266..112469- (Clytia hemisphaerica_ch_hm2_pilon)
GTATGCTGTTGTGATAAAGACAATTGCAATGATGAAACTTTTATACAATC
TTGTTACAATGGCAAGCACAACGAAGAAAGAAAGTTCACTGGACTGACTT
GTCATCAAAGCGTATTAACGAATGAAGTTGTGAAGATAAAATCTTCAATT
ATGCAGTGTAGTACATTTATGTGTTTAGAGTCTACTTTATTTTTACACAT
TTGTATAGATCCAATCACAACTAAATGTGTGGCGGCACAGTTTGACAACG
TAGGAAATATAACTGGATGTTTGAATAAAACAATGGATCAATTTTGTGGC
ATCGACATTGATGCTACTGCATTTGGAATTAACTATAAAGCGAAGGTATG
CTGTTGTGATAAAGACAATTGCAATGATGAAACTTTTATACAATCTTGTT
ACAATGGCAAGCACAACGAAGAAAGAAAGTTCACTGGACTGACTTGTCAT
CAAAGCGTATTAACGAATGAAGTTGTGAAGATAAAATCTTCAATTATGCA
GTGTAGTACATTTATGTGTTTAGAGTCTACTTTATTTTTACACATTTGTA
TAGATCCAATCACAACTAAATGTGTGGCGGCACAGTTTGACAACGTAGGA
AATATAACTGGATGTTTGAATAAAACAATGGATCAATTTTGTGGCATCGA
CATTGATGCTACTGCATTTGGAATTAACTATAAAGCGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14819MSTRG.14819Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14819.1.p1.exon2MSTRG.14819.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14819.1.p1.exon1MSTRG.14819.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14819.1.p1MSTRG.14819.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000126_pilongenomesc0000126_pilon:110266..112469 -