MSTRG.14809.2.p1 (mRNA) -

Overview
NameMSTRG.14809.2.p1
Unique NameMSTRG.14809.2.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000125_pilon:950313..952352-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14809.2.p1 ID=MSTRG.14809.2.p1|Name=MSTRG.14809.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2040bp|location=Sequence derived from alignment at sc0000125_pilon:950313..952352- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCAGCAAAATATAGAAAATATTTGAAAAAATGAGAGAATTTAAAGAAA
TGACCTTAGAAACTGACCGTTTGAGTTTGGTGAGGATCAAAGGAGAAACT
CACGGTGAAGAACTCAATCGAGTGGTTTGCGATACTTTTGAATCATTGGA
ACCATGGGTACCCTGGGCTTTCAAAATTCCAACGGTTGAGGTATGATCAT
TTTTCAGTTTACGTGATAGTAAAGACCGGTATCCACTTTCGCGCCAAATG
GGCGACACCTTTTTTGCCTGAAGAAAAGATTACGTCATAAAAAAGTTTCG
CGTGAACAAAAAAAAAGTTAAAGGGAGTTCAGCTTTTTTCAACAGTTACG
TCAATTTTGACCAATGGGATTGTTTCATTTTTCAACCGATCAATGAATGA
CCTTACAAAAACGTTAAAAAAATTTTCGCTCATTTCGCGTGAAAGTGGAG
ACCGGCCTTAAGGCCATTGTATGATAAACGGTTTCAATTCTTTTGGTTTT
TACAAACAATTAAACTTTACAATTTTTCACCATAATGGTACACTTTCCCT
TGCACACCCAGAGTGCTCTGTTCTGTCAAGCAAGTCATCCACTTCGGAGA
GTTGTCAAGGGATCGCTTTGGATCGGAATATTTTGGAAAACCGATCTGAA
CAGTTTTGCAATAATATCCACTTCAAATTTTCTGAATCAGATTCTTTCTG
TTTACAATATTCATACAAAGAAAATTAAATTAATTTAATCTTCTACAGTT
GTCCCATTGTTTGAAATCAATAGAACCGTTTCAATCCGACACGGATCGCA
AAAAAAGTTGAAAAAATCCAACTTTTTTTCTATCCGTTTTAACCAAAACA
CGTGAACATTCGAACCGTTTACGTGAAACGAATATGTGCAAATGGGTTGA
AGATAATCCCAAGAACTATAGAAGCCGTGAAAAATTATCCGGAGTGGATA
ACCCGCTTTACAATTAGCCCTGTATATCGTTAAGCTTGGTACTCACTAGT
TGAAAAAAAGTGGCGCTCTAAAACTAAAACCACAAAGCAACAAAAAGCCA
CACAAATTATAGTGAGTACACACATTAGTCGCACAAGTCTAGTAAAAAAA
TCTTGTTTAACAATGCGGTGTCTTTGAACCCTGCATCTAACATTACGCGT
GCGACTAAACATCAGGCGCGTGCGACTAGTGTTAAACGTCACTTTTTTTC
AATACGTGAGTACCAAGCTTAACAAATTACTCTGTAAAATCATTTGTTGC
TGTATCCAGGATGGTACTCTGTTGAGGACCGAAACGTCTACACAAAATTA
ATTAAAATGAACAAGAAGCTTGTGTTTATGAGAGGATCGAATTGTTCAAC
AAATTATTTTCTCTCAGGATACTATCAATGGACTTCGCTTGACCACTGAC
AACCACAACAATTACATCTTCAATATTTATCTTCGTGAAAATGACCACGA
ACTCATCGGAAACGCTAAATGTGTGACCATAGATAAAGAAAATTGTTATG
AATTAGGGTACTGGTTACACCAGAAGCATTGCGGCAAAGGATTTACGACA
GAGTGTGTACAGAGGCTTATCAAATTCGCTCGAAATGAACTGAAAGCATC
GGCAGCTGTTATGATTATTAACGAGAACAACAAAGCAAGTTTACGAATCG
CTGACAAAACTGGTTTTCAATTTGTACGAAAAATTCTGGAAGATTCTTAC
GCGTTGAGACCGGAATGGAAAGATCGAATGAACCACTATGTACAGGTGCT
TTTGTGAACAGTCGAATGAACTGCTATGTACAGGTGCTTTGTGAACAGTC
GAATGAACTGCTATGTATAGTTGCTTTTGTGAACAGTCGAATGAACCGCT
ATGTACAGGTGCTTTGTGAACAGTCGAATGAACTGCTATGTATAGCTTTT
GTGCTACAGTGCTTTTGTGAACAGTCGAATGAACCGCTATGTACAGGTGC
TTTGTGAACAGTCGAATGAACTGCTATGTATAGGTGCTTTTGTGAACAGT
CGAATGAACCTCTATGTACAGGTGCTTTTGTGAACAGTCG

Coding sequence (CDS) from alignment at sc0000125_pilon:950313..952352-

>MSTRG.14809.2.p1 ID=MSTRG.14809.2.p1|Name=MSTRG.14809.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1098bp|location=Sequence derived from alignment at sc0000125_pilon:950313..952352- (Clytia hemisphaerica_ch_hm2_pilon)
GATACTATCAATGGACTTCGCTTGACCACTGACAACCACAACAATTACAT
CTTCAATATTTATCTTCGTGAAAATGACCACGAACTCATCGGAAACGCTA
AATGTGTGACCATAGATAAAGAAAATTGTTATGAATTAGGGTACTGGTTA
CACCAGAAGCATTGCGGCAAAGGATTTACGACAGAGTGTGTACAGAGGCT
TATCAAATTCGCTCGAAATGAACTGAAAGCATCGGCAGCTGTTATGATTA
TTAACGAGAACAACAAAGCAAGTTTACGAATCGCTGACAAAACTGGTTTT
CAATTTGTACGAAAAATTCTGGAAGATTCTTACGCGTTGAGACCGGAATG
GAAAGATCGAATGAACCACTATGTACAGGTGCTTTTGTGAATGAGAGAAT
TTAAAGAAATGACCTTAGAAACTGACCGTTTGAGTTTGGTGAGGATCAAA
GGAGAAACTCACGGTGAAGAACTCAATCGAGTGGTTTGCGATACTTTTGA
ATCATTGGAACCATGGGTACCCTGGGCTTTCAAAATTCCAACGGTTGAGG
ATACTATCAATGGACTTCGCTTGACCACTGACAACCACAACAATTACATC
TTCAATATTTATCTTCGTGAAAATGACCACGAACTCATCGGAAACGCTAA
ATGTGTGACCATAGATAAAGAAAATTGTTATGAATTAGGGTACTGGTTAC
ACCAGAAGCATTGCGGCAAAGGATTTACGACAGAGTGTGTACAGAGGCTT
ATCAAATTCGCTCGAAATGAACTGAAAGCATCGGCAGCTGTTATGATTAT
TAACGAGAACAACAAAGCAAGTTTACGAATCGCTGACAAAACTGGTTTTC
AATTTGTACGAAAAATTCTGGAAGATTCTTACGCGTTGAGACCGGAATGG
AAAGATCGAATGAACCACTATGTACAGGTGCTTTTGTGAATGAGAGAATT
TAAAGAAATGACCTTAGAAACTGACCGTTTGAGTTTGGTGAGGATCAAAG
GAGAAACTCACGGTGAAGAACTCAATCGAGTGGTTTGCGATACTTTTGAA
TCATTGGAACCATGGGTACCCTGGGCTTTCAAAATTCCAACGGTTGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14809MSTRG.14809Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14809.2.p1.exon2MSTRG.14809.2.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14809.2.p1.exon1MSTRG.14809.2.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14809.2.p1MSTRG.14809.2.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000125_pilongenomesc0000125_pilon:950313..952352 -