MSTRG.14788.1.p1 (mRNA) -

Overview
NameMSTRG.14788.1.p1
Unique NameMSTRG.14788.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000125_pilon:780894..783490-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14788.1.p1 ID=MSTRG.14788.1.p1|Name=MSTRG.14788.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2597bp|location=Sequence derived from alignment at sc0000125_pilon:780894..783490- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTGAAATTATTAGGTCTCCGAGGATTCTAATTTCACTCCTCGCCCCTG TTGCCCCTTAATGTTTTCGAAGTTTTTTTGAATCTTGAATCTTCCCCATT TTTAAGGTGACTGTAATTTTACCAAAGTTTCTTGTCAAATATAGGAATAA TCTCATTCTCTTTAAATCTAAAGATTTCTCTTTTTTGATAGAATATCACA TCACATCTTTTTATTTTTCATTTAGAATTAAAAATTGAAACTAAGTGAAA ACCTTTTACCAGAATATGGGGTTCCAATATCCATTGACATTTCTAAGTGA AGCTGAACACATCCAGCACGTCAAAGAGCATCAAAAATTCTATAATAACA TTCTAAACAAAATCAATTTGGAAATTCAAGAACAGTTACGCAATGAACGA CTTGCGAAAGAAAAAGCACATCAGAAATTGCTTCGTGAAAAGAAAGAAAA CGAACAAAAGCTACAGACCAAGAACGAAGAACTTCAAAAAGCACAAAAAG AAACTGAAAAGCTACAAGACGAGGCTCGAGAAAATAGAGAAACTGTAAAA CAAGCCGAGCAGCTTATCTATAAAACTGAACAGTACAAACATGTAGAGTC TTCAGCCAAAGGGAAAACTTTTGAAGAGGAGATCAAATACGCTTTAGTTC AAACAAAAAGGATGTTGAATTTCGATTGTGTTATTGATACGCAGAATAAA ATGCGTTCATGTGATGTCAGAATTCGTGTGCCAGAGCTTGGCATTGTGGG TATCGAAGCTAAAGATAAACAAATGATTACCAAAGATGATATCTCCAAAT TTAATCGTGATCGTTTGCAGAATGGTTTCGTAGGAAGTATATTTTGGAGT AAATCTGCTAAAATTTATGATACAAATGATATGAGTGATCTACAGAGCTT TATATGGATGGATGCGAGCAGTAAGTGTTTATACATTCGTGCTAACAACG ATTTTGAGAGAATAGCCCTTGTTATTTTTGCTTATGTCGAGTTCCTTATA GCTCTTAAGGAAGGCAGTGGTAGTGATAACAAAGCATTAACTGAAACAAT TATCAAAGTTTTTGATATGATGGTGAACCAGTATGACCAGTTTGGACGCT TAAAAAAAGAAGTGCAAAATTTGGATATCACTTTTAAGAAGAATTTAGAA ATGGTGACCCATTTGTGTAAAACGCATCGTGTCAAAATTAATGAACGTCT CTTGAAAGAGACTGATTTTGTTGTGGTGTACAAGAGAGATGCAAGGAATT TAAATGCTTATCGGAACGATGAGCTGTATAAGATTCAGAGTAAAAGCTTT TTCAATCCAAAAGGTAAAGCTATGAAGAGTCCAATGAAAAGTCCATTAAA ACGGGAAAACGAGAGCAATAGAATCGACGTTAAAACTGAGGAACCACCTC TTTCAAAGAGAAGTAAAGAAATTCTGTTCGAATCTAGCGTTAGTGACTTT ACAGCCGTCCAGGAGAAGGGTTTGGCTGGAGCTAAAACACAGCTATACAA TCATGATTCGCTTTTGAAAGTAGACCCTTCGAGTTTTTACGAAGAGAATT TTGATTCAAGCAATGCGAATCGAGCAACGAAAAAATCGATTCTGGAACCG TTTCAGATTGATTTAACTTCAAATAATAGCGAGGATACATTTGATACTGC AAGCTATGATAGTCAAGAATTTTGAGAGCTCTTTGTGAAACATTTTGTTT TACAAGTCACTTTTCCCAGAAAGGATAATGGAGATTCACCATGCCTAGCT GATTAGCTGATGATTCGTAAAAGATGAAACTGACAGTATTAAATGGATTC TTGTCTACTTTTCTTAAAAATTGTATGATTCGCCATGCCTATAATAAGGT TAATACTGAGGTTAAGCATACCAGGATAATCACGACGACGGACGAAAAAT GTAATTGGCTAGTGAAAATACGAAATTTGATTGGTTGAAACTCACTAGCC TGTTAAGTTTTCATTCGTCGTCGTGATTTTGCCGATTTACTTAACCTCGC TAATGTGATACAGTGTTTCCCAGAAAAAAAGTGGACAAATTTTTATATAA AGTAAAATCCTTATAATTTATGCGAAATTTTATGACTTGTTTGTTCAATT AATATTCCAATTTCTAAAACCTATTCAATCATCTTAGGAATTGAATATCT ATTGAAACGGAGCATGAGCCTGGAAAGCGACCAAGAGTACCTAATAAAGA GGCATTTTCGATATTATTTTGCATCAAAATGTGTACGAATGGTATTTGAA TACCTAATTTGACGTATTTTGTTCATTAAATGAGATAAAAAGCAAAAAAT TTTGAAGTTGTTAGGCATTTCTGGCTTAAAATCCATAAGCAACTTTTTGG CTGAAATCCTGAAAATCCTTAGCAACTCTAGCCCTGAGCCGAAAATTGAG GTTGCTTATAAAAAAATGTGTATTTTATTCAAATGAATTAAAACGAAGTC CTTTTTAGGGACGTAAAAACTCATATAGTAGATATTGTATTTTTAGTCTG AGCAATTTTCGTACTCTTCGAGAAGAAACAGCTTGTAAGCAAATAGAACA TTTTGTAAAAGATAGCTTCTTTATGCAATGCATACTAATGTTAAGGG

Coding sequence (CDS) from alignment at sc0000125_pilon:780894..783490-

>MSTRG.14788.1.p1 ID=MSTRG.14788.1.p1|Name=MSTRG.14788.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1410bp|location=Sequence derived from alignment at sc0000125_pilon:780894..783490- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGGGTTCCAATATCCATTGACATTTCTAAGTGAAGCTGAACACATCCA
GCACGTCAAAGAGCATCAAAAATTCTATAATAACATTCTAAACAAAATCA
ATTTGGAAATTCAAGAACAGTTACGCAATGAACGACTTGCGAAAGAAAAA
GCACATCAGAAATTGCTTCGTGAAAAGAAAGAAAACGAACAAAAGCTACA
GACCAAGAACGAAGAACTTCAAAAAGCACAAAAAGAAACTGAAAAGCTAC
AAGACGAGGCTCGAGAAAATAGAGAAACTGTAAAACAAGCCGAGCAGCTT
ATCTATAAAACTGAACAGTACAAACATGTAGAGTCTTCAGCCAAAGGGAA
AACTTTTGAAGAGGAGATCAAATACGCTTTAGTTCAAACAAAAAGGATGT
TGAATTTCGATTGTGTTATTGATACGCAGAATAAAATGCGTTCATGTGAT
GTCAGAATTCGTGTGCCAGAGCTTGGCATTGTGGGTATCGAAGCTAAAGA
TAAACAAATGATTACCAAAGATGATATCTCCAAATTTAATCGTGATCGTT
TGCAGAATGGTTTCGTAGGAAGTATATTTTGGAGTAAATCTGCTAAAATT
TATGATACAAATGATATGAGTGATCTACAGAGCTTTATATGGATGGATGC
GAGCAGTAAGTGTTTATACATTCGTGCTAACAACGATTTTGAGAGAATAG
CCCTTGTTATTTTTGCTTATGTCGAGTTCCTTATAGCTCTTAAGGAAGGC
AGTGGTAGTGATAACAAAGCATTAACTGAAACAATTATCAAAGTTTTTGA
TATGATGGTGAACCAGTATGACCAGTTTGGACGCTTAAAAAAAGAAGTGC
AAAATTTGGATATCACTTTTAAGAAGAATTTAGAAATGGTGACCCATTTG
TGTAAAACGCATCGTGTCAAAATTAATGAACGTCTCTTGAAAGAGACTGA
TTTTGTTGTGGTGTACAAGAGAGATGCAAGGAATTTAAATGCTTATCGGA
ACGATGAGCTGTATAAGATTCAGAGTAAAAGCTTTTTCAATCCAAAAGGT
AAAGCTATGAAGAGTCCAATGAAAAGTCCATTAAAACGGGAAAACGAGAG
CAATAGAATCGACGTTAAAACTGAGGAACCACCTCTTTCAAAGAGAAGTA
AAGAAATTCTGTTCGAATCTAGCGTTAGTGACTTTACAGCCGTCCAGGAG
AAGGGTTTGGCTGGAGCTAAAACACAGCTATACAATCATGATTCGCTTTT
GAAAGTAGACCCTTCGAGTTTTTACGAAGAGAATTTTGATTCAAGCAATG
CGAATCGAGCAACGAAAAAATCGATTCTGGAACCGTTTCAGATTGATTTA
ACTTCAAATAATAGCGAGGATACATTTGATACTGCAAGCTATGATAGTCA
AGAATTTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14788MSTRG.14788Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14788.1.p1.exon1MSTRG.14788.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14788.1.p1MSTRG.14788.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000125_pilongenomesc0000125_pilon:780894..783490 -