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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000125_pilon:604156..609546- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14777.2.p2 ID=MSTRG.14777.2.p2|Name=MSTRG.14777.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5391bp|location=Sequence derived from alignment at sc0000125_pilon:604156..609546- (Clytia hemisphaerica_ch_hm2_pilon)
AACGATAGTAATCTCCCAGTCGCATCTAGTCCCGTTCCGTCACTGAGACC
AAGGAACTTGCTTAGAACACTTAGACATGGGTGTTTTAAAATGCTGTTTC
ATTCACACTTTAAACTTCTTTTTCAGAAATATATAATTTACAAGTTTCGA
GAGCAATGTTTATATGTCTCACCCATGCACTCCAACTATACATACTGTTC
TTCTATTTGCGTCTAGGTAAGTCATTTTTCAGGTATTTTTAGATTATCTG
GTGAATCACATAAGCTTTGAACTTCTTTGAGTTTTTAAACCTGAAAGTCC
ATAACAATCAATATCAAACAGAAATCCATCACTCGTTCAAAATTAGTGAA
TCTAATACGACTATTGCACGGCGTGTTAGTGTGTCGGGTTTTATTAATTC
GATTTTACTGGGAAAAGAAAAATAGAGCGGTGACAGGGTTAAATGAATGC
TAGTGTTTATTGTAGCTCCAACTTTCTACCCGGCTAGAATCCAGGCTAAT
GTCATTTGCGTTTTATTTCGTAGTAAATAGCCTCGAAATCAAACGTATCG
GAAATGGAGAAAAAATCGAAAGTGGTGTTGGAGAGAACCTACAATTCACT
TGGAAACTGGACGGTTTACCTTCAGAAGATGCTAATTTACATTTCCGACT
TTATTACAAAGAAAAGTTGCAAAAGCAATACCAATTATTATCCGCAGAAA
ACAGCGGAAAGAAAACGGAGACTTTGAAGCTGGAACAAAACGAACATGCT
GAATTAGGACCCTTTGATTTAAACAAAATTTCTGGTTCGTGTCAGATAGA
TTTACCAACTGCCACGTGTACTTTTCAGCTGAACGAGGCTGATTATACAC
ACACTGGAGAATATTTCTTTAGTTATTTTCATGTTGGTGAGGTCATGGGT
CAAATTCGTGATCGAATCAGCCTCAATATCGTTGGTAAGTTTGTTAAATT
TCTCTTGTGAAAATAATTTCTTGACTGGAAGATTTTTAAATTTCGGTCAA
GTCGAAAACAGAGAATTTACATGCGACTGATTCCCTTTGGTAGCTAATTC
GCTATGTATTAAAGATAAACCATAGTTCGTATAAAAACCCTGGTTTGGAA
GCCTTCTGTTTCTTTCCATTGTTTCTTACTTGAACTTACTTTGAGAAATT
AGATCGTTTTGCTCACTTTTTGATCATGTGATTGAATCTTAAACCAATCC
CAAGAGGAGTACATACTTGGTAACGTGATCAAAAACTGTTGCAAATCGAT
TTTTATCTTTTGACATTAACAAAGGAAAAAGCTAACAAAAAGTTAAAACA
AAAAGCTTCCAGAGTTTTTGATACAGACTATGGGTAAACAGATTTCTGAG
TTAATCAATGTTACTCCTGAAATATGTGTGTCCGCTTATTCTAAATTTCA
GATTTGTCTTCTTAGGCGGTCCGGACAGATGCACAGACATTATGCCTCCA
CAGAATGTATCATGCTACATCAATACTATCATGAAGCTTTCTGTCGACTT
TTGTGGTAATCCTGAACCGAAACTAGTCTGGAAAGTTGGTGGTGTTGTTA
TTAACGGTACTGTGGATCGCAGTCTAAAGGAAAGACATACCTATCAATAC
GAGGTTCAATTTGATACTACAAAAGAAAAATGTGGTCTGGTTGTCTCTCA
TAGTGCAATTGGTTACAGGAAAGGAAATGTGACTGGCAAAACTCTGATCC
TTTCAAGGCCAGGTATTGAAAATTATTGTTTTCTTTAAATCAAACATACA
AACAAAACATTTTTTGACGATTTATGTTTAAGTTTCTTTCTAGAAGATCT
ATTCTAAAAGTAAATTCAAAGCTCGAACGTTCAATAGTAAAGATTTAGAC
TTGTACACGATTTAGTAAATTGCTACACTCGAGGGAAAATCTCATTGCTC
GATAGATCATTTTGAGTTAATAAAATCCAATCAACTAGAAAAACTTTGTA
CTGTGAACCATGGATTGTATTGATATTTACGTAAAAGGGAAATTCTTATT
TAAAATGAAGCGCATTTACTAAAATTTTCAGTTCTAAATATTATTTGAAA
TCTCAAGGTCAAATATATACATTGCATTGCTAAAACTTTATCTGACGTCT
TACAACGTTACATCCACTGACCTTTATATACCCTGGACCAAGCTTCTCAA
TCCCAGCCAAGCAAAATCTTTGATCGGAGTTTTTTGAAAATTGGTACCCT
AATGGCGGCACTGGTGTGGCGTAGTGGTGTAGTGGTTATCGTGCTTGACT
TCTGTCCAGGAGGCTCGAGTTCGATACCCACCGTGGCACAACGATTCACT
TGGCAAGTAATGCTCCTTCGCCCGGGTCAACCCATGCCATGTGAGGGGAA
TCGGGTACCATAACTCTGATACAAGAGTATGGATAGATATTCCAGACATT
GTGGTGTGCCGAGACACTTAGGAGGTTCTACACCTGCGAGGACATCCGTT
CTCCCGTGTAGTTTGAGTGTCGTGGTATACACCATGGCTCGGCAGCTTGC
ATCTGCAGGGTTGCAATGTCTGCTTGCGCTGTGATTCCTACTCCACCGTG
GGTAGGACCCATTCCGATGCATCGGAGGCCTTATCTATCTATCTAATGGC
GGCACTACTCGATAGCGGTGTAAATGCATCGAGAGCGCTAGGTCTACTTT
TCCTCAAATTCTTTTGATGATGTAGCGGCGTTAGACGTTAATTTTTAACA
TTGCAATTGCTTCTCCTCGGTACCAATTCCAAAAAAACTCCAATCAAAGA
CGGCAGATATTGCTTGGTCCAGGGTTATATAAAGGTCGGTGGTTACATCA
CAATTACCCCTGTGTTTTAACACCCAGATTGAGTAGTGGTACCATTATGG
TATCACTTTTTTAAAAACTTCGATCCAAAGATTTTTGCTGGTCGGGATTG
AGTAACTGCCTGTATGACTCATTCCAAGTTCATTGACTTCAGCACTTAAA
GGGACATTAAAGTAGTAAAATGTAAACATTGTGCGAACCACGTGTCTTTA
AAGAGAACAATTAAAACCACGTGTCCAAAACAAACTTGTAAAACAATTGA
ACAATAAAAATCAGCCATATTTGGCTTGATGTTTTATTTTGACATGTGAC
ATTTGTTTTGATTTTGTATCTGCTGCATACAGTTTGTTTACGAATTTCGC
AAGTACTGTTATGTCCCTTTAATACTTCGAAATCTTTATATCTTAGAAAC
ATTAAGTGGATCGCCAGAAGGCCTACAACTCCATGCAACAGTCGGTATCG
TAGTCGCTAGTGTCTTACTTCTTCTCATTGTCCTCGTCGTCATATGTTGT
CGTTATTGCAAGAACAAAAGAAACAGTAAGTTGATATCACAAATCAATAA
GGAAGAGCTAGATAGGGTACTTTGGCTGAAAGTGTGCCGTCGTGGTTAGA
TAGGAAATCCTATCTATGCCACGTGACATCACAATAGAATTTCAGCGCTT
GACCAATCAGAAGTTTCACGGATTTGGATTATCGGTATTACGAAGTCCCG
AAACACCCCCCCCCCCTGCATGATGTTGTTACGTTTAAATTTTTTTTTTT
TTTTTCATTTGTAGAAAATCCCAAGAGCAAGGAAGGGGCAACTTGGTAAG
TCGAAGTTTCACTGTTTTTCGAAAATTTCAATGTAAAAAATTACTCACAG
AACACTGTATACTCCTAATACACGAGTTGCAAAACTATATCAATGGCAGA
CAAATGTTACTTACCGTGAAAAGCACAGGTCAAAATCATATATTAACGCT
GTGCCGACGAATCGAGATTCTATTCATCGTGCAATTAACGAAGACAAAAG
TAACCATGACGACCATCCAAGATCTTGGATGAAGTTCAAAGTTGATATTT
TTATTCCCATCTTTGAAAACACAACTAAAAAATATCATCAATGTTTTTTA
AAAAGAGTCAGTGATAGAGAACCATAACATAAAGTCTGTCTATTATTTCG
ATTCAATTAAAAGTGACATTTCCATAATTAATAGTTTAGTAGTTACTGTT
ATACAGTTGGGGATCATGTAAAAGATTTCTTTCGAAAGAAACTCACTTCG
ATTATACTTGGAGGTTTCTGGAAGGTTCGTAAATAGTAAACTGCATACTG
ATACAGTCTGCTAGACATTAATAAGGTAATATTTGCTCTTCATCTTTGAT
TCTTTCTACAGTGATTAGATTGACACATGCGCGATAAAATTTCTAATATT
GGTCATCAGAGGTTAATATATTATTTGAAAACTTAACCTCTGATACTCAG
GGTACATGTTACTTGCTTTACAACTTACAGCTGATAACTTTATTAGTGTC
AATAAATTCGAACCAATCAGAAACAAGCACATAAAATTTCGAGTAAAAGC
GTGATTTTTCTTTAGACTTTAATTCTGCAACCTGTGTCTTACTAGTCACT
TTTAGTGCCTTCCATTCAATGAAATTGAGCTCTGGATACACCCCTGTCTC
GCTGTCCCGGTGCAACTTTTTTCTTCAGTGGGGATAAAATCACTATTGAA
ATCCCAATGGGGATAGAAATTCTATCGTACCAAGGTTAAAAAATCCAGTG
TTGATGGTTTTTGAGTGCAGTTTTCAAGCATTGAATTTCGAATGGAGACG
AAATCAACTTGAATGTCCCAGTGGGGCTGAAATTCCAGGGTATTTTCCTA
TCGGGGACGAAATTTTCCGGTGCGGCCGGGGTATTAGCGGGTCTGTGACA
TAGGGGGGGGGTGTCTGAATTTATACTACTCAACGAAGCAATGGTAAAAT
AACACTTTTGAATATCTTTTCAATCAGAAACATGAAACATACCGATCATT
TTGTGTACTGTTGAAACACGTCAAATGACCTTGCTCTTTACCATAATGTT
TAGAGTTTAAGATTTGTATCAACAAAATGGCAGTTTTTTAAGTTGTAACA
AAGAATGTATTTTTTTATTTTTTAGGGGTGATGATTCAGCTCTAGCTTCA
GCTCCTTTAGCCTCTGAAAATGCTTAACATAAAAACTGCAGAAGTCAGGC
TGAAGATATGAGACAAAAACGAAATCGGTGAGGGGTTTGAGAACCAGACG
ATTCAAGCATCGGCCAAGTATGATTCTTCTCTGGTGCAAAACATGTTTCA
ATGTTTATCAAACGCCATTGGGGCATATGGAAATTAGATAAGCGTTATTT
CTTCATAAGCTATGGGGCATAAGCAAATATCATAAATAAGAAAAACTATT
CTAAACAATGGAACGGATATGGCTACTGTATTACTTGGTATGATATTTAC
ATCAAAAATTGAAAGTGTTTGGAGATATTATGATGAGAAACTGCTGGTAT
ACAAAACTATCGAGAAATTTCTAATAAATTTCTAATAAATTAAAATTAAT
TAAATTTCTAGGACATTCCTGTATATATTTGTAAATAGTTT Coding sequence (CDS) from alignment at sc0000125_pilon:604156..609546- >MSTRG.14777.2.p2 ID=MSTRG.14777.2.p2|Name=MSTRG.14777.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1932bp|location=Sequence derived from alignment at sc0000125_pilon:604156..609546- (Clytia hemisphaerica_ch_hm2_pilon)
GGGTGATGATTCAGCTCTAGCTTCAGCTCCTTTAGCCTCTGAAAATGCTT
AAAAAATCCCAAGAGCAAGGAAGGGGCAACTTGAAACATTAAGTGGATCG
CCAGAAGGCCTACAACTCCATGCAACAGTCGGTATCGTAGTCGCTAGTGT
CTTACTTCTTCTCATTGTCCTCGTCGTCATATGTTGTCGTTATTGCAAGA
ACAAAAGAAACAATGCCTCCACAGAATGTATCATGCTACATCAATACTAT
CATGAAGCTTTCTGTCGACTTTTGTGGTAATCCTGAACCGAAACTAGTCT
GGAAAGTTGGTGGTGTTGTTATTAACGGTACTGTGGATCGCAGTCTAAAG
GAAAGACATACCTATCAATACGAGGTTCAATTTGATACTACAAAAGAAAA
ATGTGGTCTGGTTGTCTCTCATAGTGCAATTGGTTACAGGAAAGGAAATG
TGACTGGCAAAACTCTGATCCTTTCAAGGCCAGGGGTGATGATTCAGCTC
TAGCTTCAGCTCCTTTAGCCTCTGAAAATGCTTAAAAAATCCCAAGAGCA
AGGAAGGGGCAACTTGAAACATTAAGTGGATCGCCAGAAGGCCTACAACT
CCATGCAACAGTCGGTATCGTAGTCGCTAGTGTCTTACTTCTTCTCATTG
TCCTCGTCGTCATATGTTGTCGTTATTGCAAGAACAAAAGAAACAATGCC
TCCACAGAATGTATCATGCTACATCAATACTATCATGAAGCTTTCTGTCG
ACTTTTGTGGTAATCCTGAACCGAAACTAGTCTGGAAAGTTGGTGGTGTT
GTTATTAACGGTACTGTGGATCGCAGTCTAAAGGAAAGACATACCTATCA
ATACGAGGTTCAATTTGATACTACAAAAGAAAAATGTGGTCTGGTTGTCT
CTCATAGTGCAATTGGTTACAGGAAAGGAAATGTGACTGGCAAAACTCTG
ATCCTTTCAAGGCCAGGGGTGATGATTCAGCTCTAGCTTCAGCTCCTTTA
GCCTCTGAAAATGCTTAAAAAATCCCAAGAGCAAGGAAGGGGCAACTTGA
AACATTAAGTGGATCGCCAGAAGGCCTACAACTCCATGCAACAGTCGGTA
TCGTAGTCGCTAGTGTCTTACTTCTTCTCATTGTCCTCGTCGTCATATGT
TGTCGTTATTGCAAGAACAAAAGAAACAATGCCTCCACAGAATGTATCAT
GCTACATCAATACTATCATGAAGCTTTCTGTCGACTTTTGTGGTAATCCT
GAACCGAAACTAGTCTGGAAAGTTGGTGGTGTTGTTATTAACGGTACTGT
GGATCGCAGTCTAAAGGAAAGACATACCTATCAATACGAGGTTCAATTTG
ATACTACAAAAGAAAAATGTGGTCTGGTTGTCTCTCATAGTGCAATTGGT
TACAGGAAAGGAAATGTGACTGGCAAAACTCTGATCCTTTCAAGGCCAGG
GGTGATGATTCAGCTCTAGCTTCAGCTCCTTTAGCCTCTGAAAATGCTTA
AAAAATCCCAAGAGCAAGGAAGGGGCAACTTGAAACATTAAGTGGATCGC
CAGAAGGCCTACAACTCCATGCAACAGTCGGTATCGTAGTCGCTAGTGTC
TTACTTCTTCTCATTGTCCTCGTCGTCATATGTTGTCGTTATTGCAAGAA
CAAAAGAAACAATGCCTCCACAGAATGTATCATGCTACATCAATACTATC
ATGAAGCTTTCTGTCGACTTTTGTGGTAATCCTGAACCGAAACTAGTCTG
GAAAGTTGGTGGTGTTGTTATTAACGGTACTGTGGATCGCAGTCTAAAGG
AAAGACATACCTATCAATACGAGGTTCAATTTGATACTACAAAAGAAAAA
TGTGGTCTGGTTGTCTCTCATAGTGCAATTGGTTACAGGAAAGGAAATGT
GACTGGCAAAACTCTGATCCTTTCAAGGCCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000125_pilon | genome | sc0000125_pilon:604156..609546 - |
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