MSTRG.14763.3.p1 (mRNA) -

Overview
NameMSTRG.14763.3.p1
Unique NameMSTRG.14763.3.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000125_pilon:351326..353346+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14763.3.p1 ID=MSTRG.14763.3.p1|Name=MSTRG.14763.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2021bp|location=Sequence derived from alignment at sc0000125_pilon:351326..353346+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTAGCCTTTGGGTCGTTTCTGATTGCGGTTGCAAACCTACTGAATAATA
CTATGGTTCTCTATAGTGACTCGTGTTCCACTCTTTTCTAGAAAACAAAt
atcaaagtaaacaaagtagaTAATAATTTACACAAAAGGAATCATTTAAC
AACAACCATATCATTACAAGCATCAATCATGAAGCAATCTTTGAATCCCA
GAGATAGCGGTAAATACATTGCAGAGAATACCAAATATGTTCAAATTCAG
CACAAGGAAATTCCAAAAGCAGCTCTCAGACTGAAAGAAGTGATGGGTAG
AAACAAATATTCAATCAAGAAATGGAAAGAATGGCCTCTTCATCCTAAAG
CAATGAATGATGATACTCTGCATTGGATATTGACCGTTGAcacattaaat
ttttcattttggttgCCTAGGAACGAGCCTCAGTTTCAAGTCGAGTACAA
AGGGAAGACGTATGAAGATTATGAAGCACTGTGCGCATGCGTAAATCGAG
CAGTCGAGGTAAACAGCAATTAATtagctacacgctttttataagaacat
cgaatAGTTTTAATAGCCTCTGGATGTGCTAAACTCTTTgtgttttaagc
caaaaaatgttcttaaaatgttattaatttcaccatttcgtgagcatttt
tgtccatttctaAGAAATCAGTTGTTTTTAGAGGTcgcaaagcctttaaa
tgttcttaactttttcctagtattttggccattgaagccttatgttctta
tatagtttgttcttataaaaaacatgtatttgcTTAGTATCACTTTAGCA
CGGGGTTTATTTAAAGAAGACTGGATGGCCGCGATCAAGTAGCCCGCTCG
TAAATGGTAATTCTCAATGTTGAGCTTTTCTATAAGCGGAATGTAAAGCT
GTTGGCCAGGTGTTAGTATTccgttttaaattttatttttcaactccaag
tagttcaATTCTATTTGGAACACAGGTTGTCATGCTGTAGCAAACGGtaa
aattaaaaatggcttttttaaaaatctaattaataatctaactttcgaat
tttttcaggAAGGAATCCTCATAACGACTGCTTCTTACAACAAAGAAATC
TCCCTGGAAACGGTTAATCAAGTGTTTCGATCATCCAATGGGACAACACT
TCCCATGCTCAAACAACGGTGGGAAAATCTACGCCAAGTGGGTTTAGTGC
TATGTGAAAAATTTAACGGAAATTTCGCGAATGTTATCAAGGAAGCTGGT
GAAGATGTAGAGAAACTTATAGAACTTGTCACGActaatttttcttgttt
caacGATGTTGGTTGTTTTGAAGGGCAGCCAGTACAGTTCCAAAAACGAG
TACAAATTCTAATTGCGGATATTTGGGCCTGCTTCGAAGCAACCGGACAC
GGCCGTTTCCGTAATATTCACCATTTAACTATGTTTCCAGATTACCGGGT
CCCTCAAGCATTGTTATCCCTGGGTGTGGTCACGTACACGGATGAGTTTA
TGAAACGTGTGCAGAGTGAGAAATTACTCCCACACGGAGAGCGCGAAGAA
ATGGAAATACGTGGTTGTTCTATTCACGCTATTGAGCTTTTACGGGAACA
TTTAAATAAAAGTTTAATGGGCGTTGAAAATGAGGAACCCATTCTTAATT
CAGTATTGATCGACTTTTATTTATGGGATTTTGCTACCGAGAATGCTTCG
GATCTTGGAAGCTTCCCTGAACATCGCACGAGGTCTATTTATTATTGACT
GGACATAACATGATTTTACAAATGTTCTAGTTGTCAGATATGATTTATAT
ATGATATTATATTTACTACGAAAAGAAAGTAATCCTAGAAATCAACTGAG
TTTGTTCCTACCAAATCTTCTTAACTACAGAAGGCGAGATTTCATTAAAG
TTCAAACTATGAATAAAGCGTAGAATAGGACAAGATGGTCAAATTCATTA
AAGTTAGCTAAGAATAAGAGAAGCCCTACATGGAAATTACAAAGGATTTG
ACATTTGCTCCGGAGCTCAAG

Coding sequence (CDS) from alignment at sc0000125_pilon:351326..353346+

>MSTRG.14763.3.p1 ID=MSTRG.14763.3.p1|Name=MSTRG.14763.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2040bp|location=Sequence derived from alignment at sc0000125_pilon:351326..353346+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAGCAATCTTTGAATCCCAGAGATAGCGGTAAATACATTGCAGAGAA
TACCAAATATGTTCAAATTCAGCACAAGGAAATTCCAAAAGCAGCTCTCA
GACTGAAAGAAGTGATGGGTAGAAACAAATATTCAATCAAGAAATGGAAA
GAATGGCCTCTTCATCCTAAAGCAATGAATGATGATACTCTGCATTGGAT
ATTGACCGTTGAcacattaaatttttcattttggttgCCTAGGAACGAGC
CTCAGTTTCAAGTCGAGTACAAAGGGAAGACGTATGAAGATTATGAAGCA
CTGTGCGCATGCGTAAATCGAGCAGTCGAGgAAGGAATCCTCATAACGAC
TGCTTCTTACAACAAAGAAATCTCCCTGGAAACGGTTAATCAAGTGTTTC
GATCATCCAATGGGACAACACTTCCCATGCTCAAACAACGGTGGGAAAAT
CTACGCCAAGTGGGTTTAGTGCTATGTGAAAAATTTAACGGAAATTTCGC
GAATGTTATCAAGGAAGCTGGTGAAGATGTAGAGAAACTTATAGAACTTG
TCACGActaatttttcttgtttcaacGATGTTGGTTGTTTTGAAGGGCAG
CCAGTACAGTTCCAAAAACGAGTACAAATTCTAATTGCGGATATTTGGGC
CTGCTTCGAAGCAACCGGACACGGCCGTTTCCGTAATATTCACCATTTAA
CTATGTTTCCAGATTACCGGGTCCCTCAAGCATTGTTATCCCTGGGTGTG
GTCACGTACACGGATGAGTTTATGAAACGTGTGCAGAGTGAGAAATTACT
CCCACACGGAGAGCGCGAAGAAATGGAAATACGTGGTTGTTCTATTCACG
CTATTGAGCTTTTACGGGAACATTTAAATAAAAGTTTAATGGGCGTTGAA
AATGAGGAACCCATTCTTAATTCAGTATTGATCGACTTTTATTTATGGGA
TTTTGCTACCGAGAATGCTTCGGATCTTGGAAGCTTCCCTGAACATCGCA
CGAGGTCTATTTATTATTGAATGAAGCAATCTTTGAATCCCAGAGATAGC
GGTAAATACATTGCAGAGAATACCAAATATGTTCAAATTCAGCACAAGGA
AATTCCAAAAGCAGCTCTCAGACTGAAAGAAGTGATGGGTAGAAACAAAT
ATTCAATCAAGAAATGGAAAGAATGGCCTCTTCATCCTAAAGCAATGAAT
GATGATACTCTGCATTGGATATTGACCGTTGAcacattaaatttttcatt
ttggttgCCTAGGAACGAGCCTCAGTTTCAAGTCGAGTACAAAGGGAAGA
CGTATGAAGATTATGAAGCACTGTGCGCATGCGTAAATCGAGCAGTCGAG
gAAGGAATCCTCATAACGACTGCTTCTTACAACAAAGAAATCTCCCTGGA
AACGGTTAATCAAGTGTTTCGATCATCCAATGGGACAACACTTCCCATGC
TCAAACAACGGTGGGAAAATCTACGCCAAGTGGGTTTAGTGCTATGTGAA
AAATTTAACGGAAATTTCGCGAATGTTATCAAGGAAGCTGGTGAAGATGT
AGAGAAACTTATAGAACTTGTCACGActaatttttcttgtttcaacGATG
TTGGTTGTTTTGAAGGGCAGCCAGTACAGTTCCAAAAACGAGTACAAATT
CTAATTGCGGATATTTGGGCCTGCTTCGAAGCAACCGGACACGGCCGTTT
CCGTAATATTCACCATTTAACTATGTTTCCAGATTACCGGGTCCCTCAAG
CATTGTTATCCCTGGGTGTGGTCACGTACACGGATGAGTTTATGAAACGT
GTGCAGAGTGAGAAATTACTCCCACACGGAGAGCGCGAAGAAATGGAAAT
ACGTGGTTGTTCTATTCACGCTATTGAGCTTTTACGGGAACATTTAAATA
AAAGTTTAATGGGCGTTGAAAATGAGGAACCCATTCTTAATTCAGTATTG
ATCGACTTTTATTTATGGGATTTTGCTACCGAGAATGCTTCGGATCTTGG
AAGCTTCCCTGAACATCGCACGAGGTCTATTTATTATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14763MSTRG.14763Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14763.3.p1.exon1MSTRG.14763.3.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14763.3.p1.exon2MSTRG.14763.3.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14763.3.p1MSTRG.14763.3.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000125_pilongenomesc0000125_pilon:351326..353346 +