MSTRG.14750.1.p1 (mRNA) -

Overview
NameMSTRG.14750.1.p1
Unique NameMSTRG.14750.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000125_pilon:69664..76264+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14750.1.p1 ID=MSTRG.14750.1.p1|Name=MSTRG.14750.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6601bp|location=Sequence derived from alignment at sc0000125_pilon:69664..76264+ (Clytia hemisphaerica_ch_hm2_pilon)
TACAAAGTTAGCAACATAAATCTACTCTCAAATAAAAGGATATAACAACA TTTTCTTTTGGCTTTGAAGAGCATATAACAAACTTGAACTATGATCGacc aaataaagtttttaagaGAAGGTGTTTGACATTTTATAATAAACAAGACA TAACAAGCTAGGAGTTTAAGCGACAGAGGTGAGTATTGATTTTTTAGGAT TATGACCTTTGGAGTGaataatacagggtgtccctaattaaagtatcgag tcgaaacacaactatgagtagaaagttttatgtgcgtgttcacaaaattg tattttaagctctccctcttttttctttgtcattacgattaatttatacg ttgtaactaccaaTTGTAATAAGCcagtgtgatggagaacgttcttatat tttagcgataacacactcAAACtgttctactcaatcgcatgttcaaactc gatactttaattagggacaccctgtatacctgaaagaaaacattaacatc atttacttgaaaataatctttcataagtcggtgttttttacacttttggc gaaaacgtgaagttttttaaaacacgttttaaaaataaatacaaagtgCA CCTTTTCTTAATTGGATATCAGGGGATCGGCAAAGGATTGAAGATTCCAT TCCTTTTTTCCCGAGCCTTCTAGAGAAACTAAGCTAGTACTTAAAACCTT TGAAAGTTAGGAGCACGTTAGGATTAAACGGttccataatgaaaatggat tatggattccaagagcaataacttttgatataatgtGGCTTTAGAACTGA AATTTTGCAGGATGGAGCATTTATGTACTTTCtattcctaaataaaaaat ctttcagcTGGGAGCAGTTTGGAATTACTTAttcctgatttctttttgag tttgagTCTTTTTGAACTGAGGACTGGAGTATGTTTATTTGACATTAAGT AGTTCGAATTTAACTATTTGGAAGGTTTGGGTCCCTAAGACcacgaaaat aaaattttccactaGAATAGAGCATCCAAGGATTATGGAATCCTTCATTG AAAGAAGCATACTTTGCCTTATCCAAAATGAGCGTATTAGTCTGGAATGA AATATTCTACAAGGCTCTAAACTGATTTTTTACGTTATACGTGATATGTC GTTACGTCTATGCCTTAAAATAAGCTCAGATAGAGCCCCAAAGGATTAAT AATTCCATTTTGCGAAAAGTTGGGGCTGGGGTTGGGTGCACCACTTCAAT CGCTTTAAATTGGAGTTTTTAATCCTAAAACGCTCGTGAAACTGCACTTT TTGGTATCTGAGAATGTTTTAACGTAAAGTGCAATtgacttttgattgat tttagatTGTAATCAGCccattttaacgatgaaatgtaTCTTTTATAATT GTTCAAGTTCAGAGATGTTTTCCGGATGGAATTTCGGATCCAAAAGTGCT CTTCATCATTGTTTCATAAAATATGGAGATCGTGTGACATGTTGAGACCA TCAGAATAAATCCAAGAGCCACGTAACTCTCATAATTCCAAAGTTcataa aatctaatattttggaatattgaaTCCTTCTTCGCTCCTGGGACCAAAAC CAAAGCTCTAAGCTCGTGTGCTCCacctttttggaagatttcatcCCAAA ATCCTTGTTGAAACTTGTActattcaagaaaaaccgttttttagaaaatt taatgtcacgttttcgccaaaagtgtaaaaaacaccgacataaCCTTTGC CAATTTTAATATCCGAATTAATTTTTATATTCATTTAAATCATCACATGG GAGTCCATTATCTATTCGTTGAACAAAAAGGATCTTTTTGTAATTATCTC AAACTAAGATAGAACATATTCCGtttttttGGGTCACACTGTATATAGGG GAAACTGTGTGATTGGAAGGCAATAACTTTCGACCCCCTACTAGGTACTA AATTCGTGAGATGACAGTTGTTTGGGAAAGCGAGTCTTTGACGTGGAGCT CAAATGTAACTTCAGGATGTGGTTGAATAGAATGCAACCTTACCTTATAT TATTTTCTTCAttggattttagattttagattttagatCAAACTTATTAA ATATTGGTGCATTTAGAAAGAGCAATGTCGATCAAAGAGCTTTGGTATAC AACTCTTACGAAGAAATTCTCAAAAAGAGTTCGAAACACCATCAAAAAGA ATATCTACACCGTCGGTAGTGGAAGTTATGACATTGAAAAAGCACGACAC AGCGGATATGTCGACATGTTCAATTACGACGATTATGATCACGTGACTat ggatgacgtcatcgatgagaCAATGACATCATCTTCATTTCAACCGAAga aaaaaagcgatgcatcAAAGTATCAGTGTAAAAGTAATGACGTCAAAAGT CGTTACCAGTATAAATCTGACGTCGTCAATTTACGTCACGATTATAAGTC GGATGTTGTCATACACGTCACTGACACTACACATTACGATATTCCGAAAT TACAACCTCTTGAAGATGATTTTGACGTTCATCCTGCAATGGATTCTGAG CACTTTTATGACGTTCCAAAAGCAATCATGCACGGCCATCACGACACACc aaacataaaaaaacgtcaacggaaaacaaacaacgccagaaaaaacCGAG ATTTTCATTTGAACGTTCCTGACCGGGATAGCATGGTTTCTGGAAGATAT CAACGTTTGGTTTTACgtaaaaagaaagaattaaaGAAACAACAGCGTAG AAGTCGTATAAATGAACTTTACGAAAACGTCGAAAGTGGATCCGACTCCG ACAGTGATATGACGGATTCTGAGGACGACATTTCCGGTACTGATAGTCCG TATGAAGATTATTACGACATGTATACGCCGTTAGATGGATGTCATGATCA GAATGAAAAACCTGAGTTTTACGGACGTTTCTTCAGTCATACCTTAACAC GTGACAAAGAGAGGCTAAGTACAGGTTTTCAGAGAAGCAATTTCAAGCGT AGTGTACATAGGTCCGTAAACGTCAAATTCGAATTCAAGAAAAGCAATAC CAAGTTAGTAAACACACTAAACAGAGATAACccattgaaaaaaacttttg ataaagTCAAACTGTTGGCAACTGATGATTGGCTTTTCGAGCTTGATGAA TCCAAGTTGGCCTTAGAACTAAAAATACGGAATGGTCTTGAAAGCAGGAT CTTGTACCACCATTTGAGAGGCTGGAAACCTAAAAATGGTTTCCGTGCCT CAGCCTGGAAAGACAAATTCGCAGAGGATTTGACAGTGTACGAACTATTT TTATTCATATCTGGTAATTGTGATTCAAAGTTAGCTTGCAGACTAAAAAT ATACCAAGTTGACGGTTATATGATGAGTCTGTTGGTGAAAGATGAACTTC TATTTCGAGATTGCTTACTGAGCTTGGGAGAAATTCAAAAGTTGAGAGAA TCGTTTTATCCGATACGAACCCGATGTGATGCAATCGGGGAACACGATTT AAAAGAGaaattctaagaacattctcaTGTGTTGtaaaggattttttttc tttcaaggaATTCTGAACGATCTTCCATTCTGGTGCCCAGAGCAACTTGC ACCACATTATggttttactgatggacgtgatgCAATTGTAAGCGCTATCa gaataaacacccctgtctcacagccccactggaacttttttcctaagtgg ggataaaattcctattgaaattccaattgGGATAGAGATTCAAagattgt tccaaggttaaaaaacccagtggggatggttttagagtgtaatttttaaa catggaatttcgagtggggatgaaatcaaagtcgatttcccagtggggct gaaattcaagggtattttcccatcgggcttttttccagtgggactgggGT CCCAACGGGTCTGTTACACAGGGGTGTAGAGTAATACGAAAGCGGGTTAA AGTTAGAAAACCCTTCAATCGACTCGGAGAAAAACTACCAGAAAGGTCCA GATAAACACATAATAGGGAGACTAGATTAGAGTTTAACAGGAGATATATC ATATGCAACGAATTCAAGATAATCGAGGTCAACATTTCTTGTTAAACTCT TACCCAGTCTATTTAAAGATAGACCGGAGCGTCATTTTGAGCTTTCGTTT TACATATTCTTTAATAtacattttcaagatattttaaaaatcataattag aaattacaatgtaaataatattaagaaaaattaaaattttgtcaacaatt aaatttcatttcacGAATCTATAGTCGAGTCCTCTCAAACAGGGGTTATC CTTTACCGATTCTATCTCAGCCTCCAAATTCATGTTTCTTTAGGAAATAT GGAATAAACCATTGAAGCCACTTTGAAAAACCAGGaaatattgcaaaaat tgaaTGGAATACTGTATAAAAATTGCCTAAGAGCAAACATTACAACTTGG ATGACTGAGACATTTCATCCCTATTCActctttttgtataagaactAGTA ACAATTGCTATTATTTTGACACTTTAAGCCTCAAATTATTCATATCATGT tcaagtctattcacgataagtgtgcactctttttcttttacctataactt ttgaaggaattcttcaatctttataaatttggtatcatcggaaagatatt agtgagtggaacaatttgaaataaaaagatctttaaaagaattctaaaaa tgaagatgaaaatgaagaagaaaaaaatgaagatcttgtagaaaagtgct ataactttcattttcactggagagattctttgatcttaggagattatcac tgtgaagaaattttattaaaatacttattaaatataaagttatgatacaa agttaataagtgattgaccccaaaaaaacagcaaaaaactgcagaaaaca gcatttttagacgtcaatcagcttataactttgtttgatatcttttgact gaaggATTCACCTCAGTAATCcatccactcactaatatctttcccatgat accaaatttttgaagattgaagaattccgtcaaaagttataggtaaaaga aaaaagagtgcacacttatcgtgaatagactttaattaaAGTGTGAAATC AGGATATCATAGGCTTTACATTCaaattttactactttgacccctaaatt gcttaaaattgagtaattctaggcttagcattgttcttaaattgttctca tttttcgaacctcataattcttataaaattttcttataaaaataagagTT TAATCTTGATATCATTGTCTCCTTTGTAAGTCACAGTGGAAGCAAAGAAA CGTATTTTTTGTTAGTaaaaccatataagaacataaggcggcttcgatgg ccaaattgttaagaatatgttaagatccttttaaggctttgtagactcta gAACACCTGGgtccttaggaaaatggacaaaaatactcacaaaatggtga aaataagaacatggtaagaacatttttaggcttagagctcaaaaagtttt tggatgttcttataaaaaaacgtgtacacaataaaaaacatcaaagcaTC TCATCGTCCATTGGAAAGTAAGTAGTAAGTGTGCGACCGCTTTTAGGGTG TAACCCAGAGGTTTCCTTTTATTTTAATCCGTCTATTTAATTGCTATGCA TCAAGCCGAGAATATCAACGAGTACAATTTCAGGAATGACCCTTAACCTT GCACACCGTACgtggatgctctacctttatgCTTGCGGCCAATTGAATAA CTCttttaaataaagaacaaaagATATCTATTTACACTTTTTTACATTTC CCAATCAATAAAGCCAACAGTCAAAAATGCAACAATCTTGACAGCAACAG TTAGGTACATAGTTAAActtggtcaaatttttcaatattttctcttGTTA AACGTGTGTTCTCAACGTTTTTAATTTGAGGTAGAACCATGTGACGTGTT CCGCCTTGGAATGAAGCTTCGTGAGATTTCTTCTCTCGCAACTCAATACT CGGTGTTCCATCGTCTAAACTATTGAAATAATATCGAAGTCGACTTTCCT GTAACGTGTTTTTACGAGATACATTTTTACGAGAATAGTCGGAATCGGTA CCGAATGACAATGATCGGCTTTTTCCATTCCGACAAATTACCGAAGTCGA ATCGTCGGTAAGAATACATTTTGTCTCATCGTTTGAAACTCGGCTGTATC CTGATACAGAAACCTCGGCTATTGACGGCGATTCTCGGTAAAACGAACTT GATGAATCGGAAGAAGACATTAAGATATCGTCAGAAAATACCGACGACGA TTTTTGTAAGAATCCTCGTGGACGATTTCCGACAACACTGTCTTGTGACA TAGCTCTTCTTGATAGTAAACGCCTTGGTGTAGAACACGTTTGGGGCGAC ATGCTGGGCGGGATCGGGGTTGATCGACGTTTCGGTCGCAAAGACATGAT TGCGAGGAAGATTTATTCTTCCAgaaatttatgatgaaattttatcactt tttttgctaaaaCGAATAAGAAAAGGAGAAAAGGTTACTTACTAAAGTCA ATTCTCTTCAAGTGTACACTCCTTTTTACTACTACACTTTaccctcgcta a

Coding sequence (CDS) from alignment at sc0000125_pilon:69664..76264+

>MSTRG.14750.1.p1 ID=MSTRG.14750.1.p1|Name=MSTRG.14750.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1392bp|location=Sequence derived from alignment at sc0000125_pilon:69664..76264+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCGATCAAAGAGCTTTGGTATACAACTCTTACGAAGAAATTCTCAAA
AAGAGTTCGAAACACCATCAAAAAGAATATCTACACCGTCGGTAGTGGAA
GTTATGACATTGAAAAAGCACGACACAGCGGATATGTCGACATGTTCAAT
TACGACGATTATGATCACGTGACTatggatgacgtcatcgatgagaCAAT
GACATCATCTTCATTTCAACCGAAgaaaaaaagcgatgcatcAAAGTATC
AGTGTAAAAGTAATGACGTCAAAAGTCGTTACCAGTATAAATCTGACGTC
GTCAATTTACGTCACGATTATAAGTCGGATGTTGTCATACACGTCACTGA
CACTACACATTACGATATTCCGAAATTACAACCTCTTGAAGATGATTTTG
ACGTTCATCCTGCAATGGATTCTGAGCACTTTTATGACGTTCCAAAAGCA
ATCATGCACGGCCATCACGACACACcaaacataaaaaaacgtcaacggaa
aacaaacaacgccagaaaaaacCGAGATTTTCATTTGAACGTTCCTGACC
GGGATAGCATGGTTTCTGGAAGATATCAACGTTTGGTTTTACgtaaaaag
aaagaattaaaGAAACAACAGCGTAGAAGTCGTATAAATGAACTTTACGA
AAACGTCGAAAGTGGATCCGACTCCGACAGTGATATGACGGATTCTGAGG
ACGACATTTCCGGTACTGATAGTCCGTATGAAGATTATTACGACATGTAT
ACGCCGTTAGATGGATGTCATGATCAGAATGAAAAACCTGAGTTTTACGG
ACGTTTCTTCAGTCATACCTTAACACGTGACAAAGAGAGGCTAAGTACAG
GTTTTCAGAGAAGCAATTTCAAGCGTAGTGTACATAGGTCCGTAAACGTC
AAATTCGAATTCAAGAAAAGCAATACCAAGTTAGTAAACACACTAAACAG
AGATAACccattgaaaaaaacttttgataaagTCAAACTGTTGGCAACTG
ATGATTGGCTTTTCGAGCTTGATGAATCCAAGTTGGCCTTAGAACTAAAA
ATACGGAATGGTCTTGAAAGCAGGATCTTGTACCACCATTTGAGAGGCTG
GAAACCTAAAAATGGTTTCCGTGCCTCAGCCTGGAAAGACAAATTCGCAG
AGGATTTGACAGTGTACGAACTATTTTTATTCATATCTGGTAATTGTGAT
TCAAAGTTAGCTTGCAGACTAAAAATATACCAAGTTGACGGTTATATGAT
GAGTCTGTTGGTGAAAGATGAACTTCTATTTCGAGATTGCTTACTGAGCT
TGGGAGAAATTCAAAAGTTGAGAGAATCGTTTTATCCGATACGAACCCGA
TGTGATGCAATCGGGGAACACGATTTAAAAGAGaaattctaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14750MSTRG.14750Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14750.1.p1MSTRG.14750.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14750.1.p1.exon1MSTRG.14750.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14750.1.p1.exon2MSTRG.14750.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000125_pilongenomesc0000125_pilon:69664..76264 +