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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000007_pilon:513005..516743- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1471.1.p1 ID=MSTRG.1471.1.p1|Name=MSTRG.1471.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3739bp|location=Sequence derived from alignment at sc0000007_pilon:513005..516743- (Clytia hemisphaerica_ch_hm2_pilon)
AAAATTAAGTAAATTTTTTTATTGGTGTATACAAAAAAGAAAGAAACAAA
CAAAAGAATATTAAAAAAACAAATTTGATTCAAGACCTTTCTTCAACATT
GTAATGGCAGAATTAGATAGAAAAATGGATGAATTGAAGTTAGAAAAAAA
GAATCCAATAAACCCTGTGTTGCGCACCATTTTACAAGGTGTTGCTGATG
ATAATTGTCAATTTTCCAAACTTTATGGTATGCCTCATGTTGTCAAGTTG
ATATGGGAAAAATATTTGGTAGCAATGCATATGCATATTAATTTTGGAAA
GACCACTGAGAATTATATGGAAGATTACAACCCATTCATAGCCCTAACTG
GCTTTCGGCATCGATTTAATGTGAAATTCCCTAAACCAACTGATATCAAT
ATCAACATGATGCCTTTTGTCATGGCAAAGCAATTTGAAAACATGCAATT
GCCAGATTATCTCAAACCATATTCTGATATGATTGAAACTGCGTTCTTTA
AAGAAGTTCCCCTCATTTTTCACATAGAGGAATTGGGTAAAATCGGTTAT
CTAACAATTCATGAAAGTTTGGTCGAGGAAGGTAAATCTCAGCGGAGACC
AGGTTTACATACTGAATCTCCTGGTTATATTTATGTTAAGAATGGTTTAA
GTGATGAAAAGTGTGAGGAGTTGTGCATTGAAAAGGGTTCTGGTTATGAT
GAAATCGTCCCTTTTCCTGTTTCGTGGGGACAGTTTAGTTACACTAGTAT
AGATGTCCCTCATGGTGGTATTTATATGGCATCCAATGTTGATGATTCTT
GTAAAGTTTGGGATTGTCAGATTGTTGCTGACAATAATGGCGAGGAGTTG
ATTCGCAAACATGGAGATATTGAGCATTTACGATGTTTCTTGCCAGAATC
AACACTTTTAAAATCTAATTATCTCTATTGGATAACTGATCGTACACCTC
ACGAATCTCTGCCATTGAAGAAAGGATCATACAGACAGTTTTTTAGGCTT
GTAACACACAGAGTTTCAGTTTGGTATGAAGATCATTCAACCAAAAATCC
TAATGGAGTTGTCCCTGATCCGAAGATGACTAGGATAGTGAAAGGGTCAA
AATTTGATGAGAACTATGTCACTATTGTAGGTTAAGAAAGGTTATCAACT
CTTTGTGTGATTTTTGAAAGCTCAATCTTTATTTAGGGTTATCCTTAAAT
TTTTTTATTGCCTAATAAATGAAATTTGTTTTATATTTTATGTCGTTTTT
CAGACCAACTAATTCAAGAAAATCATGCCATTTTAGGGAGTATTATACCG
GGGGTGCGCCAAAAAAAGTATACAGTATTGTGAAGATATAGTGAGTTTAT
GGTTAAAGAGTTTTAGTTGATTCTTTTTCTATTCTATAGAGAAAAGCTCA
ACTTAAATTTTGATCTTTAAAACTTTTAAAATCGATTCACTCAATCAAAA
GTTATGTTAATAAAAACTGGAGATTTTGAGTAGTCAAAATGACAAAATTT
ATGTCAACTATACTGATGCGCCTTTTTCTTTTCATAATTCAAAGTCGTAA
CCAATGGTATCACATTTATTTTTTTTCTCAAAGATTTTGACCCAAATTTG
GGGGTCGGGAGTTTTCCATTGTAGTGCCCGTTTTTTGACTATAAAAAGTT
TTGTCAGGTGTAATTTCCAAGACTCCTCTTCAAGTAATATCTTTTTTCGA
ATAAATTAAATGTGGTAATTCCCATCATATTTCATGAATCTCAAGGGCGG
TCCCCTACTATTTAATATAACATTTTATGATAATTTATTTGTATCATGGA
TTATAATGTAATTACATAATAGTTTTCAGTAAAATAATAATTTTATCGAT
TTAACATCTTTCAAAGCATTCTTGTTTTTTGGTATTTTCAATGCTGTTTT
TTTTTATTATTGTAATCAAAACTTTTTCTCAAACTGTGTCAGTTTTGAAC
AGATATAATATATAGATTTATTAAACAAACGTTCAATTATCAAAATTTGA
CTACATTTTTGCTTACAATTCTGTAGCATATAAAAATACTAAAAATCGTT
TTGACCTCGGCAAATATTCTTCTTAAAAACTTTTGGCAGATATAACCTAA
ATCTCTTTGTGATACAGACATCACTGCATTCAAGTTTTTTTTAGAATTGT
TTACTTTTCGCTTTTATATAAATATAATTATTTATACTGTATTTCATTAG
AAATCTTTTTGTAAAGAAAATTTTTGGACCTACCTGGAGGTCCTTTAATT
TGACCGTTGTCCGTCTGTCCGTTTGTCTGTTATAAGCTTACCTCAGGATT
GGCTCATTAGTTTGTTTTTATTTTTTGTACAGTGATGCAAAATAGCAATC
AAGTTACAATGTAAATTTATTGGTTTTACATTGTTATCGATAAGTTTCCT
TACTTACTATGATCAAAGAAAATTAGGCTTTAGATTGAAATAATTTCTTT
ATTTGTGTATACAAGCAAGAAAGAAACAAACAAAAGAATATTTAAAACAA
ATTTGATTCAAGACCCTTCAACATTGTAATGGCAGAATTAGATAGAAAAA
TGGATGAATTAAATTTAGAAAAAAAGAATCCAATAAACCCTGTGTTGCGC
ACCATTTTACAAGGTGTTGCTGATGAGAATTGTCAATTTTCTAAACTTTA
TGGTATGCCTCATGTTGTCAAGTTGATATGGGAAAAAGTTTTGGTAGCAA
TGCATATGCATATTAAATTTGGAAAGGATGAGAATTATGAGCGAGATTAC
AACCCACCTCCACCATTCATAGCCCAAACTGGCTTTCGACTTCGATTTGA
TGTGAAATTCCCCAAACCAACTGATATCAATATCAACATGATGCCTTTTG
TCATGGCAAAGAAATTTGAAAACATGCAATTGCCAGATTATCTCAAACCA
TATTCTGATATGATTGAAACTGCGTTCTTTAATGAACTTCCCTTTTTTGA
CATAGAGGAATTTGGTAAAATCGGTTATCTAACAATTCATGAGAGTTTGG
TCGAGGAAGGTAAATCTCAGCGGAGACCAGGTCTACATACTGAATCTCCT
GGTTTTATTTATGTTAAGAATGATTTAAGTGATGAAAAGTGTGAGGAGTT
ATGCATTGAAAAGGGTTCTGGTCATGACAAAATCATGGCTCTTGGTGTTT
GGTGGGGAAAGCTTGGATACAACAGTCATCATTTCCCTAATGGTGGTATT
TATATGGCATCCAATGTTGATGATTCTTGTAAAGTTTGGGATTGTCAGAT
TGTTGCTGACAATAATGGCGAGGAGTTGATTCGCAAACATGGAGATATTG
AGCATTTACGATGTTTCTTGCCAGAATCAACACTTTTAAAATCTGATATT
CTCTATTGGATCAATGACCGTACACCTCACGAATCTCTGCCATTGAAGAA
AGGAACATACAGACAGTTTTTTAGGCTTGTAACACACAGAGTTTCAGTTT
GGTATGAAGATCATTCAACCAAAAATCCTAATGGAGTTGTCCCTGATCCA
AAGATGACTAGGATAGTGAGAGGATCGAAATTTGACGAGGGATATGTCAC
TGTTGTAGGATAATAATCTTTGCGCACTCATTAATATAGATGTCACTGTA
AACACCTTTCACTCCATTGTTTCAATGTTGATGGGATGCTAGGCTATATC
AAGATTTTCATGTTTTTTTTTCTTTACATAAAAACCAAAACATACCTTTT
ATTTTACATTTTTTACTATCCAAGTTGGTTTATTAGTAA Coding sequence (CDS) from alignment at sc0000007_pilon:513005..516743- >MSTRG.1471.1.p1 ID=MSTRG.1471.1.p1|Name=MSTRG.1471.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2070bp|location=Sequence derived from alignment at sc0000007_pilon:513005..516743- (Clytia hemisphaerica_ch_hm2_pilon)
GTGTTGCTGATGAGAATTGTCAATTTTCTAAACTTTATGGTATGCCTCAT
GTTGTCAAGTTGATATGGGAAAAAGTTTTGGTAGCAATGCATATGCATAT
TAAATTTGGAAAGGATGAGAATTATGAGCGAGATTACAACCCACCTCCAC
CATTCATAGCCCAAACTGGCTTTCGACTTCGATTTGATGTGAAATTCCCC
AAACCAACTGATATCAATATCAACATGATGCCTTTTGTCATGGCAAAGAA
ATTTGAAAACATGCAATTGCCAGATTATCTCAAACCATATTCTGATATGA
TTGAAACTGCGTTCTTTAATGAACTTCCCTTTTTTGACATAGAGGAATTT
GGTAAAATCGGTTATCTAACAATTCATGAGAGTTTGGTCGAGGAAGGTAA
ATCTCAGCGGAGACCAGGTCTACATACTGAATCTCCTGGTTTTATTTATG
TTAAGAATGATTTAAGTGATGAAAAGTGTGAGGAGTTATGCATTGAAAAG
GGTTCTGGTCATGACAAAATCATGGCTCTTGGTGTTTGGTGGGGAAAGCT
TGGATACAACAGTCATCATTTCCCTAATGGTGGTATTTATATGGCATCCA
ATGTTGATGATTCTTGTAAAGTTTGGGATTGTCAGATTGTTGCTGACAAT
AATGGCGAGGAGTTGATTCGCAAACATGGAGATATTGAGCATTTACGATG
TTTCTTGCCAGAATCAACACTTTTAAAATCTGATATTCTCTATTGGATCA
ATGACCGTACACCTCACGAATCTCTGCCATTGAAGAAAGGAACATACAGA
CAGTTTTTTAGGCTTGTAACACACAGAGTTTCAGTTTGGTATGAAGATCA
TTCAACCAAAAATCCTAATGGAGTTGTCCCTGATCCAAAGATGACTAGGA
TAGTGAGAGGATCGAAATTTGACGAGGGATATGTCACTGTTGTAGGATAA
ATGGCAGAATTAGATAGAAAAATGGATGAATTGAAGTTAGAAAAAAAGAA
TCCAATAAACCCTGTGTTGCGCACCATTTTACAAGGTGTTGCTGATGAGA
ATTGTCAATTTTCTAAACTTTATGGTATGCCTCATGTTGTCAAGTTGATA
TGGGAAAAAGTTTTGGTAGCAATGCATATGCATATTAAATTTGGAAAGGA
TGAGAATTATGAGCGAGATTACAACCCACCTCCACCATTCATAGCCCAAA
CTGGCTTTCGACTTCGATTTGATGTGAAATTCCCCAAACCAACTGATATC
AATATCAACATGATGCCTTTTGTCATGGCAAAGAAATTTGAAAACATGCA
ATTGCCAGATTATCTCAAACCATATTCTGATATGATTGAAACTGCGTTCT
TTAATGAACTTCCCTTTTTTGACATAGAGGAATTTGGTAAAATCGGTTAT
CTAACAATTCATGAGAGTTTGGTCGAGGAAGGTAAATCTCAGCGGAGACC
AGGTCTACATACTGAATCTCCTGGTTTTATTTATGTTAAGAATGATTTAA
GTGATGAAAAGTGTGAGGAGTTATGCATTGAAAAGGGTTCTGGTCATGAC
AAAATCATGGCTCTTGGTGTTTGGTGGGGAAAGCTTGGATACAACAGTCA
TCATTTCCCTAATGGTGGTATTTATATGGCATCCAATGTTGATGATTCTT
GTAAAGTTTGGGATTGTCAGATTGTTGCTGACAATAATGGCGAGGAGTTG
ATTCGCAAACATGGAGATATTGAGCATTTACGATGTTTCTTGCCAGAATC
AACACTTTTAAAATCTGATATTCTCTATTGGATCAATGACCGTACACCTC
ACGAATCTCTGCCATTGAAGAAAGGAACATACAGACAGTTTTTTAGGCTT
GTAACACACAGAGTTTCAGTTTGGTATGAAGATCATTCAACCAAAAATCC
TAATGGAGTTGTCCCTGATCCAAAGATGACTAGGATAGTGAGAGGATCGA
AATTTGACGAGGGATATGTCACTGTTGTAGGATAAATGGCAGAATTAGAT
AGAAAAATGGATGAATTGAAGTTAGAAAAAAAGAATCCAATAAACCCTGT
GTTGCGCACCATTTTACAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000007_pilon | genome | sc0000007_pilon:513005..516743 - |
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