MSTRG.14678.1.p1 (mRNA) -

Overview
NameMSTRG.14678.1.p1
Unique NameMSTRG.14678.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000123_pilon:1058659..1059994+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14678.1.p1 ID=MSTRG.14678.1.p1|Name=MSTRG.14678.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1336bp|location=Sequence derived from alignment at sc0000123_pilon:1058659..1059994+ (Clytia hemisphaerica_ch_hm2_pilon)
GTTGATTTTATAGTgtaaatagaaataaaaatgaaaataacaatcTGCAT CACTACTCTACTTTTGGGATCAATTTTGTTATGTCATGctgaaagtgaaa ataaataCAATTGTCCAACCAGATTTCATTCAATATCAGGAGATTTCGAT GTTCAAGGAAGATTTGATGAAATGGTAAAAGCCAATAGAGGGTAAGTCGC AAATTCCATGAAGTCACCTTACGGAAGTGCCTATAAATATCAAGAAATAC GAATCTATTTTCAAATTGCTATATAGTGTTTCATACTTGCTAAATAAATC TTCAGACATTGCCACCCTAAATTTTGGGCTATTTATTTCATGTCATCAGG ATGATTCATTTCATGTTGAAATTGAGTCTTATTAAAAAAtcgtttttaat tttctttagtATGACCATTCGTCACAAACATGTTCGTGTCAATAATAAAG AAGAGGAATATGATTACACCATTGCTTTCTGTGGAGCAAAAAATGCTGTC ATACAAAAGGATATCGATGAAGGCAATGGCAAGCAAATAGGAGAACCACG CTCTTTGGGAACATACAAAAACTCGTCTCTTGTTGGTGGAGGTATGTATT ATATTTGCATATATTATTTAAACATTGCATTAaactattttgacttttga aaataagctattttctctaccccttattttcccttgcagttttgcctctT GTGTCACTATATCTATGTCATtattcccgggcctaatccgcgtcctccct ctcaaaaatatcttataatatactgttctttggactaaaaaatggctagg tcgtataaaagatgtcacggaaccccaggcttggccctaCTAACATATAT GTGATTCTGTATTCTGAAGAAATGCAACTCTTCAATCCATAAGAAAGATT ATTTATTACTAATAAttgtttgaagaaattttctGATGTTATTTCTATAA GCTCAAACCGTGAAATATTTCCTTAGAAAATTTGAGCTTAAAGAAATAGC ATTGGGAAGAGTTTTAATAATACGATTCATCATAATTTCGTGAATATCTA TAGAGTCATTTATAATGTATTCTTGTTACCAGAATTATTCAGCAGCCTCT TTTTGTACATTCTTCTCAGAGGATTGGATGTTTATAATGTATCGTGAAGG ACAATCATATAACAGTCATTGTCACAATGCTCGTAAGGAATCCTGGATCA ATGTTCGCTGTGAAGACAAAGGGGAGGTAAAGAAGTTCGAACACTATATA ATTGTTGGTATCCGTTTTCCTTGacttattggacctaccccggtggaggt cctataaacctgagtttgttcgttcgtccgttcgtt

Coding sequence (CDS) from alignment at sc0000123_pilon:1058659..1059994+

>MSTRG.14678.1.p1 ID=MSTRG.14678.1.p1|Name=MSTRG.14678.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1494bp|location=Sequence derived from alignment at sc0000123_pilon:1058659..1059994+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaaaataacaatcTGCATCACTACTCTACTTTTGGGATCAATTTTGTT
ATGTCATGctgaaagtgaaaataaataCAATTGTCCAACCAGATTTCATT
CAATATCAGGAGATTTCGATGTTCAAGGAAGATTTGATGAAATGGTAAAA
GCCAATAGAGGtATGACCATTCGTCACAAACATGTTCGTGTCAATAATAA
AGAAGAGGAATATGATTACACCATTGCTTTCTGTGGAGCAAAAAATGCTG
TCATACAAAAGGATATCGATGAAGGCAATGGCAAGCAAATAGGAGAACCA
CGCTCTTTGGGAACATACAAAAACTCGTCTCTTGTTGGTGGAGAGGATTG
GATGTTTATAATGTATCGTGAAGGACAATCATATAACAGTCATTGTCACA
ATGCTCGTAAGGAATCCTGGATCAATGTTCGCTGTGAAGACAAAGGGGAG
GTAAAGAAGTTCGAACACTATATAATTGTTGGTATCCGTTTTCCTTGaat
gaaaataacaatcTGCATCACTACTCTACTTTTGGGATCAATTTTGTTAT
GTCATGctgaaagtgaaaataaataCAATTGTCCAACCAGATTTCATTCA
ATATCAGGAGATTTCGATGTTCAAGGAAGATTTGATGAAATGGTAAAAGC
CAATAGAGGtATGACCATTCGTCACAAACATGTTCGTGTCAATAATAAAG
AAGAGGAATATGATTACACCATTGCTTTCTGTGGAGCAAAAAATGCTGTC
ATACAAAAGGATATCGATGAAGGCAATGGCAAGCAAATAGGAGAACCACG
CTCTTTGGGAACATACAAAAACTCGTCTCTTGTTGGTGGAGAGGATTGGA
TGTTTATAATGTATCGTGAAGGACAATCATATAACAGTCATTGTCACAAT
GCTCGTAAGGAATCCTGGATCAATGTTCGCTGTGAAGACAAAGGGGAGGT
AAAGAAGTTCGAACACTATATAATTGTTGGTATCCGTTTTCCTTGaatga
aaataacaatcTGCATCACTACTCTACTTTTGGGATCAATTTTGTTATGT
CATGctgaaagtgaaaataaataCAATTGTCCAACCAGATTTCATTCAAT
ATCAGGAGATTTCGATGTTCAAGGAAGATTTGATGAAATGGTAAAAGCCA
ATAGAGGtATGACCATTCGTCACAAACATGTTCGTGTCAATAATAAAGAA
GAGGAATATGATTACACCATTGCTTTCTGTGGAGCAAAAAATGCTGTCAT
ACAAAAGGATATCGATGAAGGCAATGGCAAGCAAATAGGAGAACCACGCT
CTTTGGGAACATACAAAAACTCGTCTCTTGTTGGTGGAGAGGATTGGATG
TTTATAATGTATCGTGAAGGACAATCATATAACAGTCATTGTCACAATGC
TCGTAAGGAATCCTGGATCAATGTTCGCTGTGAAGACAAAGGGGAGGTAA
AGAAGTTCGAACACTATATAATTGTTGGTATCCGTTTTCCTTGa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14678MSTRG.14678Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14678.1.p1MSTRG.14678.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14678.1.p1.exon1MSTRG.14678.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14678.1.p1.exon2MSTRG.14678.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14678.1.p1.exon3MSTRG.14678.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000123_pilongenomesc0000123_pilon:1058659..1059994 +