MSTRG.1467.22.p1 (mRNA) -

Overview
NameMSTRG.1467.22.p1
Unique NameMSTRG.1467.22.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000007_pilon:558517..560846-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1467.22.p1 ID=MSTRG.1467.22.p1|Name=MSTRG.1467.22.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2330bp|location=Sequence derived from alignment at sc0000007_pilon:558517..560846- (Clytia hemisphaerica_ch_hm2_pilon)
TTAGAAGAATGAAATGTAAACTAAAAAGAATATTTACTTTGCTGATTGTT
TTTATTTGGTTGTTGGTGTTGTTGTCTTACTTCCAAGCTCCTAAAGTTCA
AAAGGTATACAGTTTCAACCATATTTTTTTAAGTTTTCATATGCAACTGT
TTCCAGCAAACTGTTACAATATAGTTTTTCACAAAAGACACAAGGATAAT
GCTTTTCCTTTTAAACTTCTTTTGATTTTTTCGTTTTAACACGAAAATTA
CCTAGCTAGGCTGGATCAATTTTTGTTTGATGTTTTAGAACACTATATTA
GCTTCAAGTACATTGGACGAGACAAGTTATATATCAAAAACAAAATTATC
TGAATCAGAGGATCCATACCATAGACACAAATTCAACCAACAAATCAGTG
ATGAGTTGGACAGCGATAGGCCAATCCCTGATACGCGCCCGCCACAGTAA
AGTTAACAATTTATTTTTTTACTAAATCGGAAATCATTTATTCAAAAAAT
ATGAAATGCTTGGGGGAAGGAATGTGTGTTTTTTGGCTACAGAAGGGAAG
TCTGCTTTTGAAACTGGCAACTTGAGAACCTTGCATTACATATTTATAAC
TCTTACATTTTCAAAGATTAAATGACAGATTACCAACTTTCTGCCTGTCC
TTACTTGGTTTCTTTACTAACCTAACTTCTTATGTTTTGTATCTAGATGT
TTAGAGGAGAGTTATGACAAGCGGGTGTCCAGCACTTCGATTATCATCAC
TTTTCATAATGAAGCCCGGTCAGCTTTGCTACGGACTATTAAAAGGTAAA
TCAAAATACAGTTGTACAGGCAATATGAATACAGGTGTTTTGCTTACAGT
TGCCTTTTTCTCTATTTTTATCCTTACACATTGCTCAAATTTTGCGGCTT
CGTGCTAAGGATCGTTTCTCATGATGATATTCTTACATTTTGATATTTTT
AGATTTGTTGTTCTTATACAGTATACGGTGCGGCCTCCGTAATGTTAATG
AGCGTAATATCTTTTCTTGATTATCATACATTATTATATCTTATACTTTC
AGCGTACTGGATAGAACACCACCTCGCCTACTAATGGAGATTATCCTGGT
TGATGATTTTAGTGCCAATGGTAAGTGAATGCAAAATTGCGTTCGGAACA
GCCAACTAAAAACTTTCTGGTGCAATTGATGTTTCCATCTAGCTTATTTT
TCAATTTTTAACCGTTTCTTCCATAGAAAAAGATGGTGCTTTGTTGAAAG
ACCTACCCAAAATTGTTTTGATGCGGAACGACAAACGAGAAGGTGTGTAT
TCATTTCTTTTCATGGGAACCCATTCTCCCAGTGAAGTTTATTAAAAATT
CGGAGGACGGTGGTTGAAGTAGGAGCTCGCTTTTCTTGTAGCCTAAAGAA
TGTAGGTTCAAGCCCAACGTGTATCGACTGTCTTAGCGAATATCAAAATG
ACAATATTAGATATGCGTTTTACTGAATTCTAATTGGAGGAGGCAGTTTT
AGTGTTGATGTTAGTTCAGACCAATCAATAACTCAGAAAAATGCGTGAAT
TGGTTGAATCCTTCAACTCATTTCTAACTTTCCCCTTTCTTCTTTTTAGG
GTTGATTCGTTCACGTTTGAAAGGTGTGAGCGTCGCCAAGTCATCCATCT
TAACATTCCTTGATAGCCACTGTGAAGTGAACGTCGGTTGGATTGAACCA
TTGCTAGCAAAAGTTGAACAGGTTCAAAGATTATCGCCGTAAACCCCCAA
TCTTGTCAATATGTAACTTTCGATTTCTATCGAATACAGTTTGTAGCAAA
GCAAAAAAAAAGACATTATGAAAAAAATTAAAATATTGTGTTACCCTTGG
GACGTAGAATCCAATCTATTTTTGTTAATTCTACATATTTCTAAAATTAT
AGGATCCACTTGCGATAGCTTCACCGGTGATTGACATCATCAAAACGGAT
ACGTTGGAATATAAAGCCTCTTCAAATTACTTGAAAGGAGGTAAACACTT
CGGAGAAATCTTTCCTTGAGATGAACATCTGGAGAATGATAGGGTGAATG
TCTTCATTGCTTCTTAATACAGTAACCCTAACCTCTGATTAGCCATCTTA
GAAGTTGACTACATAGTAAAAAACATAAAAATGCAGTAATAAATTTACTC
ATTAATTTACTGACTCTATCTCTGCTAATCAAGATTTTCAAGATTCGCTT
TTTCTTACTGTTTATTTACTGTACTTTTTTCAGTATGAATTTCTGCATTC
ACCTTTCAACTAATGATTTAACATCAACTCACTGCTCAAAAAACAGTTAC
AACTAATTCGCAATCTTAATCGATACAAGG

Coding sequence (CDS) from alignment at sc0000007_pilon:558517..560846-

>MSTRG.1467.22.p1 ID=MSTRG.1467.22.p1|Name=MSTRG.1467.22.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5124bp|location=Sequence derived from alignment at sc0000007_pilon:558517..560846- (Clytia hemisphaerica_ch_hm2_pilon)
GATCCACTTGCGATAGCTTCACCGGTGATTGACATCATCAAAACGGATAC
GTTGGAATATAAAGCCTCTTCAAATTACTTGAAAGGAGGTAAACACTTCG
GAGAAATCTTTCCTTGAGGTTGATTCGTTCACGTTTGAAAGGTGTGAGCG
TCGCCAAGTCATCCATCTTAACATTCCTTGATAGCCACTGTGAAGTGAAC
GTCGGTTGGATTGAACCATTGCTAGCAAAAGTTGAACAGAAAAAGATGGT
GCTTTGTTGAAAGACCTACCCAAAATTGTTTTGATGCGGAACGACAAACG
AGAAGCGTACTGGATAGAACACCACCTCGCCTACTAATGGAGATTATCCT
GGTTGATGATTTTAGTGCCAATGATGTTTAGAGGAGAGTTATGACAAGCG
GGTGTCCAGCACTTCGATTATCATCACTTTTCATAATGAAGCCCGGTCAG
CTTTGCTACGGACTATTAAAAGAACACTATATTAGCTTCAAGTACATTGG
ACGAGACAAGTTATATATCAAAAACAAAATTATCTGAATCAGAGGATCCA
TACCATAGACACAAATTCAACCAACAAATCAGTGATGAGTTGGACAGCGA
TAGGCCAATCCCTGATACGCGCCCGCCACAAGAAGAATGAAATGTAAACT
AAAAAGAATATTTACTTTGCTGATTGTTTTTATTTGGTTGTTGGTGTTGT
TGTCTTACTTCCAAGCTCCTAAAGTTCAAAAGGATCCACTTGCGATAGCT
TCACCGGTGATTGACATCATCAAAACGGATACGTTGGAATATAAAGCCTC
TTCAAATTACTTGAAAGGAGGTAAACACTTCGGAGAAATCTTTCCTTGAG
GTTGATTCGTTCACGTTTGAAAGGTGTGAGCGTCGCCAAGTCATCCATCT
TAACATTCCTTGATAGCCACTGTGAAGTGAACGTCGGTTGGATTGAACCA
TTGCTAGCAAAAGTTGAACAGAAAAAGATGGTGCTTTGTTGAAAGACCTA
CCCAAAATTGTTTTGATGCGGAACGACAAACGAGAAGCGTACTGGATAGA
ACACCACCTCGCCTACTAATGGAGATTATCCTGGTTGATGATTTTAGTGC
CAATGATGTTTAGAGGAGAGTTATGACAAGCGGGTGTCCAGCACTTCGAT
TATCATCACTTTTCATAATGAAGCCCGGTCAGCTTTGCTACGGACTATTA
AAAGAACACTATATTAGCTTCAAGTACATTGGACGAGACAAGTTATATAT
CAAAAACAAAATTATCTGAATCAGAGGATCCATACCATAGACACAAATTC
AACCAACAAATCAGTGATGAGTTGGACAGCGATAGGCCAATCCCTGATAC
GCGCCCGCCACAAGAAGAATGAAATGTAAACTAAAAAGAATATTTACTTT
GCTGATTGTTTTTATTTGGTTGTTGGTGTTGTTGTCTTACTTCCAAGCTC
CTAAAGTTCAAAAGGATCCACTTGCGATAGCTTCACCGGTGATTGACATC
ATCAAAACGGATACGTTGGAATATAAAGCCTCTTCAAATTACTTGAAAGG
AGGTAAACACTTCGGAGAAATCTTTCCTTGAGGTTGATTCGTTCACGTTT
GAAAGGTGTGAGCGTCGCCAAGTCATCCATCTTAACATTCCTTGATAGCC
ACTGTGAAGTGAACGTCGGTTGGATTGAACCATTGCTAGCAAAAGTTGAA
CAGAAAAAGATGGTGCTTTGTTGAAAGACCTACCCAAAATTGTTTTGATG
CGGAACGACAAACGAGAAGCGTACTGGATAGAACACCACCTCGCCTACTA
ATGGAGATTATCCTGGTTGATGATTTTAGTGCCAATGATGTTTAGAGGAG
AGTTATGACAAGCGGGTGTCCAGCACTTCGATTATCATCACTTTTCATAA
TGAAGCCCGGTCAGCTTTGCTACGGACTATTAAAAGAACACTATATTAGC
TTCAAGTACATTGGACGAGACAAGTTATATATCAAAAACAAAATTATCTG
AATCAGAGGATCCATACCATAGACACAAATTCAACCAACAAATCAGTGAT
GAGTTGGACAGCGATAGGCCAATCCCTGATACGCGCCCGCCACAAGAAGA
ATGAAATGTAAACTAAAAAGAATATTTACTTTGCTGATTGTTTTTATTTG
GTTGTTGGTGTTGTTGTCTTACTTCCAAGCTCCTAAAGTTCAAAAGGATC
CACTTGCGATAGCTTCACCGGTGATTGACATCATCAAAACGGATACGTTG
GAATATAAAGCCTCTTCAAATTACTTGAAAGGAGGTAAACACTTCGGAGA
AATCTTTCCTTGAGGTTGATTCGTTCACGTTTGAAAGGTGTGAGCGTCGC
CAAGTCATCCATCTTAACATTCCTTGATAGCCACTGTGAAGTGAACGTCG
GTTGGATTGAACCATTGCTAGCAAAAGTTGAACAGAAAAAGATGGTGCTT
TGTTGAAAGACCTACCCAAAATTGTTTTGATGCGGAACGACAAACGAGAA
GCGTACTGGATAGAACACCACCTCGCCTACTAATGGAGATTATCCTGGTT
GATGATTTTAGTGCCAATGATGTTTAGAGGAGAGTTATGACAAGCGGGTG
TCCAGCACTTCGATTATCATCACTTTTCATAATGAAGCCCGGTCAGCTTT
GCTACGGACTATTAAAAGAACACTATATTAGCTTCAAGTACATTGGACGA
GACAAGTTATATATCAAAAACAAAATTATCTGAATCAGAGGATCCATACC
ATAGACACAAATTCAACCAACAAATCAGTGATGAGTTGGACAGCGATAGG
CCAATCCCTGATACGCGCCCGCCACAAGAAGAATGAAATGTAAACTAAAA
AGAATATTTACTTTGCTGATTGTTTTTATTTGGTTGTTGGTGTTGTTGTC
TTACTTCCAAGCTCCTAAAGTTCAAAAGGATCCACTTGCGATAGCTTCAC
CGGTGATTGACATCATCAAAACGGATACGTTGGAATATAAAGCCTCTTCA
AATTACTTGAAAGGAGGTAAACACTTCGGAGAAATCTTTCCTTGAGGTTG
ATTCGTTCACGTTTGAAAGGTGTGAGCGTCGCCAAGTCATCCATCTTAAC
ATTCCTTGATAGCCACTGTGAAGTGAACGTCGGTTGGATTGAACCATTGC
TAGCAAAAGTTGAACAGAAAAAGATGGTGCTTTGTTGAAAGACCTACCCA
AAATTGTTTTGATGCGGAACGACAAACGAGAAGCGTACTGGATAGAACAC
CACCTCGCCTACTAATGGAGATTATCCTGGTTGATGATTTTAGTGCCAAT
GATGTTTAGAGGAGAGTTATGACAAGCGGGTGTCCAGCACTTCGATTATC
ATCACTTTTCATAATGAAGCCCGGTCAGCTTTGCTACGGACTATTAAAAG
AACACTATATTAGCTTCAAGTACATTGGACGAGACAAGTTATATATCAAA
AACAAAATTATCTGAATCAGAGGATCCATACCATAGACACAAATTCAACC
AACAAATCAGTGATGAGTTGGACAGCGATAGGCCAATCCCTGATACGCGC
CCGCCACAAGAAGAATGAAATGTAAACTAAAAAGAATATTTACTTTGCTG
ATTGTTTTTATTTGGTTGTTGGTGTTGTTGTCTTACTTCCAAGCTCCTAA
AGTTCAAAAGGATCCACTTGCGATAGCTTCACCGGTGATTGACATCATCA
AAACGGATACGTTGGAATATAAAGCCTCTTCAAATTACTTGAAAGGAGGT
AAACACTTCGGAGAAATCTTTCCTTGAGGTTGATTCGTTCACGTTTGAAA
GGTGTGAGCGTCGCCAAGTCATCCATCTTAACATTCCTTGATAGCCACTG
TGAAGTGAACGTCGGTTGGATTGAACCATTGCTAGCAAAAGTTGAACAGA
AAAAGATGGTGCTTTGTTGAAAGACCTACCCAAAATTGTTTTGATGCGGA
ACGACAAACGAGAAGCGTACTGGATAGAACACCACCTCGCCTACTAATGG
AGATTATCCTGGTTGATGATTTTAGTGCCAATGATGTTTAGAGGAGAGTT
ATGACAAGCGGGTGTCCAGCACTTCGATTATCATCACTTTTCATAATGAA
GCCCGGTCAGCTTTGCTACGGACTATTAAAAGAACACTATATTAGCTTCA
AGTACATTGGACGAGACAAGTTATATATCAAAAACAAAATTATCTGAATC
AGAGGATCCATACCATAGACACAAATTCAACCAACAAATCAGTGATGAGT
TGGACAGCGATAGGCCAATCCCTGATACGCGCCCGCCACAAGAAGAATGA
AATGTAAACTAAAAAGAATATTTACTTTGCTGATTGTTTTTATTTGGTTG
TTGGTGTTGTTGTCTTACTTCCAAGCTCCTAAAGTTCAAAAGGATCCACT
TGCGATAGCTTCACCGGTGATTGACATCATCAAAACGGATACGTTGGAAT
ATAAAGCCTCTTCAAATTACTTGAAAGGAGGTAAACACTTCGGAGAAATC
TTTCCTTGAGGTTGATTCGTTCACGTTTGAAAGGTGTGAGCGTCGCCAAG
TCATCCATCTTAACATTCCTTGATAGCCACTGTGAAGTGAACGTCGGTTG
GATTGAACCATTGCTAGCAAAAGTTGAACAGAAAAAGATGGTGCTTTGTT
GAAAGACCTACCCAAAATTGTTTTGATGCGGAACGACAAACGAGAAGCGT
ACTGGATAGAACACCACCTCGCCTACTAATGGAGATTATCCTGGTTGATG
ATTTTAGTGCCAATGATGTTTAGAGGAGAGTTATGACAAGCGGGTGTCCA
GCACTTCGATTATCATCACTTTTCATAATGAAGCCCGGTCAGCTTTGCTA
CGGACTATTAAAAGAACACTATATTAGCTTCAAGTACATTGGACGAGACA
AGTTATATATCAAAAACAAAATTATCTGAATCAGAGGATCCATACCATAG
ACACAAATTCAACCAACAAATCAGTGATGAGTTGGACAGCGATAGGCCAA
TCCCTGATACGCGCCCGCCACAAGAAGAATGAAATGTAAACTAAAAAGAA
TATTTACTTTGCTGATTGTTTTTATTTGGTTGTTGGTGTTGTTGTCTTAC
TTCCAAGCTCCTAAAGTTCAAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1467MSTRG.1467Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1467.22.p1MSTRG.1467.22.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1467.22.p1.exon8MSTRG.1467.22.p1.exon8Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1467.22.p1.exon7MSTRG.1467.22.p1.exon7Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1467.22.p1.exon6MSTRG.1467.22.p1.exon6Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1467.22.p1.exon5MSTRG.1467.22.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1467.22.p1.exon4MSTRG.1467.22.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1467.22.p1.exon3MSTRG.1467.22.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1467.22.p1.exon2MSTRG.1467.22.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1467.22.p1.exon1MSTRG.1467.22.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007_pilongenomesc0000007_pilon:558517..560846 -