MSTRG.1467.16.p1 (mRNA) -

Overview
NameMSTRG.1467.16.p1
Unique NameMSTRG.1467.16.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000007_pilon:528196..530004-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.1467.16.p1 ID=MSTRG.1467.16.p1|Name=MSTRG.1467.16.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1809bp|location=Sequence derived from alignment at sc0000007_pilon:528196..530004- (Clytia hemisphaerica_ch_hm2_pilon)
TGTTGGTGTTGTTGTCTTACTTCCAAGCTCCAAAAGTTCAAAAGGTATAC
AGTTTCATTCAAAGATTAGTTTTAAGAATAAAGAAAAAAATGTTTAAATT
GCAAAATCCTTTTATTCCAGACTTTTGCTACTGTTTTCAGCATATGTATT
TTCAGGGGTCCAAAACAGGAGATTTTACACGAGCTTTTGCCCAAAACGAT
ATTCCTATAATCTTTTAGAACACAATCTTGGCTTCAAGTACATTTGACGA
GACAAGTTATATATCAAAAACGAAATTATCTGAATCAGAGGATCCATACC
ATAGACACAAATTCAACCAACAAATCAGTGATGAGTTGGATAGCGATAGG
CCAATCCCTGATACGCGCCCGCCACAGTAAAGTTAACAATTTATTTTTTT
CTAAATCGGAAATTATTTATTCAAAAAATATGAAATGCTTGGGGGAAGGA
ATGTGTGTTTTTGGCTACAGAACGGAAGTCTGCTTTTGAAACTGGAAACT
TGAGACCTTGCATTATTTATAACTCTTACATTTTCAAAGATTAAATGACA
GATTACCAACTTTCTGCCTGTCCTTAGTACTTGGTTTCTTTACTATACTA
ACTTAACTTTTTGGACCTACCCCGGTGGGGTGGAGGTCCTATAAATTAAC
TTGTGTTCGTTCGTCCGTTCGTCCGTCCGTTCGTCTGTTACCAACTTTTC
TCAGGATTGAATCATAGGAATCTTTTGATTTTTAGTACAAAGGTGCAAAA
TGGTGGTGGCCAAAATGTGACGGAGCCCGATTTTCGAAAAATAATGTTTT
TGGGCAAATTTGGGCCAAAAAACGGCTAAAAAACGGGTTTATTATTATAT
TGGATCATTGTTTTTTTCAGATTATTTTGCATGAAAGTAGGTAAAAGATG
GCTCAAGCAGATTTTTGTTAAAAAAGAATTTTTCAACTCAAAAAAACGCA
TCTTTGTCTATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGC
TAAATTACTAAATTTTTTGATGAGATAGATGATTTTTTTGCTCACGAAGT
CTTGAATATGAAAGAATATTTCAAGAGTATGAAATTTTGGTTTCTAAACG
TTTTTTTATAAGAAACAAACGACTAATTTTAATAGATCGTCACTACTTGT
GTTCTGAATGATTGTTTAACGGTCATGCTCACGTAGATATCAATTATATC
AGATTATATGTGTTAAATGCATAACCAGGTAGGTCCATAAAAGTATCACT
TGTTATGTTTTGTATCTAGATGTTTAGAGGAGAGTTATGACAAGCGGTTG
TCCAGCACTTCGATTATCATCACTTTTCATAATGAAGCGAGGTCAGCTTT
GCTACGGACTATTAAAAGGTAAATCAAAATACAGTTGTACAGGCAATATG
AATACATGTGTTTTGATTACAGCTGCCTTTTTCTCTATTTTTATCCTTAC
ACATTGCTCAAATTTTGCAGTTTCGTGCTAAGGATCGTTTCTCATCATGA
TCTTCTTACCTTTTGATATTTTTAGATTTGTTGTTCTTATACGGCGCGGC
CTCCGTAATGTTAATGAACGTAATATCTTTCCTTGATTATCATACATTAT
TATATCTTATACTTTCAGCGTACTGGATAGAACACCGCCTCACCTACTAA
CGGAGATTATCCTGGTTGATGATTTTAGTGCCAATGGTAAGTGAATACAT
AAAATTGTGTTCGGAACAGCCAACTAAAAAACTTGGGGGTGTAATTGATG
TTTCCATCTAGCTTATTTTTCAATTTTTAACCGTTTCTTCCATAGAAAAA
GATGGTGCT

Coding sequence (CDS) from alignment at sc0000007_pilon:528196..530004-

>MSTRG.1467.16.p1 ID=MSTRG.1467.16.p1|Name=MSTRG.1467.16.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1905bp|location=Sequence derived from alignment at sc0000007_pilon:528196..530004- (Clytia hemisphaerica_ch_hm2_pilon)
AAAAAGATGGTGCTCGTACTGGATAGAACACCGCCTCACCTACTAACGGA
GATTATCCTGGTTGATGATTTTAGTGCCAATGATGTTTAGAGGAGAGTTA
TGACAAGCGGTTGTCCAGCACTTCGATTATCATCACTTTTCATAATGAAG
CGAGGTCAGCTTTGCTACGGACTATTAAAAGAACACAATCTTGGCTTCAA
GTACATTTGACGAGACAAGTTATATATCAAAAACGAAATTATCTGAATCA
GAGGATCCATACCATAGACACAAATTCAACCAACAAATCAGTGATGAGTT
GGATAGCGATAGGCCAATCCCTGATACGCGCCCGCCACATTGGTGTTGTT
GTCTTACTTCCAAGCTCCAAAAGTTCAAAAGAAAAAGATGGTGCTCGTAC
TGGATAGAACACCGCCTCACCTACTAACGGAGATTATCCTGGTTGATGAT
TTTAGTGCCAATGATGTTTAGAGGAGAGTTATGACAAGCGGTTGTCCAGC
ACTTCGATTATCATCACTTTTCATAATGAAGCGAGGTCAGCTTTGCTACG
GACTATTAAAAGAACACAATCTTGGCTTCAAGTACATTTGACGAGACAAG
TTATATATCAAAAACGAAATTATCTGAATCAGAGGATCCATACCATAGAC
ACAAATTCAACCAACAAATCAGTGATGAGTTGGATAGCGATAGGCCAATC
CCTGATACGCGCCCGCCACATTGGTGTTGTTGTCTTACTTCCAAGCTCCA
AAAGTTCAAAAGAAAAAGATGGTGCTCGTACTGGATAGAACACCGCCTCA
CCTACTAACGGAGATTATCCTGGTTGATGATTTTAGTGCCAATGATGTTT
AGAGGAGAGTTATGACAAGCGGTTGTCCAGCACTTCGATTATCATCACTT
TTCATAATGAAGCGAGGTCAGCTTTGCTACGGACTATTAAAAGAACACAA
TCTTGGCTTCAAGTACATTTGACGAGACAAGTTATATATCAAAAACGAAA
TTATCTGAATCAGAGGATCCATACCATAGACACAAATTCAACCAACAAAT
CAGTGATGAGTTGGATAGCGATAGGCCAATCCCTGATACGCGCCCGCCAC
ATTGGTGTTGTTGTCTTACTTCCAAGCTCCAAAAGTTCAAAAGAAAAAGA
TGGTGCTCGTACTGGATAGAACACCGCCTCACCTACTAACGGAGATTATC
CTGGTTGATGATTTTAGTGCCAATGATGTTTAGAGGAGAGTTATGACAAG
CGGTTGTCCAGCACTTCGATTATCATCACTTTTCATAATGAAGCGAGGTC
AGCTTTGCTACGGACTATTAAAAGAACACAATCTTGGCTTCAAGTACATT
TGACGAGACAAGTTATATATCAAAAACGAAATTATCTGAATCAGAGGATC
CATACCATAGACACAAATTCAACCAACAAATCAGTGATGAGTTGGATAGC
GATAGGCCAATCCCTGATACGCGCCCGCCACATTGGTGTTGTTGTCTTAC
TTCCAAGCTCCAAAAGTTCAAAAGAAAAAGATGGTGCTCGTACTGGATAG
AACACCGCCTCACCTACTAACGGAGATTATCCTGGTTGATGATTTTAGTG
CCAATGATGTTTAGAGGAGAGTTATGACAAGCGGTTGTCCAGCACTTCGA
TTATCATCACTTTTCATAATGAAGCGAGGTCAGCTTTGCTACGGACTATT
AAAAGAACACAATCTTGGCTTCAAGTACATTTGACGAGACAAGTTATATA
TCAAAAACGAAATTATCTGAATCAGAGGATCCATACCATAGACACAAATT
CAACCAACAAATCAGTGATGAGTTGGATAGCGATAGGCCAATCCCTGATA
CGCGCCCGCCACATTGGTGTTGTTGTCTTACTTCCAAGCTCCAAAAGTTC
AAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.1467MSTRG.1467Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1467.16.p1MSTRG.1467.16.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.1467.16.p1.exon5MSTRG.1467.16.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1467.16.p1.exon4MSTRG.1467.16.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1467.16.p1.exon3MSTRG.1467.16.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1467.16.p1.exon2MSTRG.1467.16.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.1467.16.p1.exon1MSTRG.1467.16.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000007_pilongenomesc0000007_pilon:528196..530004 -