MSTRG.14649.5.p1 (mRNA) -

Overview
NameMSTRG.14649.5.p1
Unique NameMSTRG.14649.5.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000123_pilon:693468..697421-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14649.5.p1 ID=MSTRG.14649.5.p1|Name=MSTRG.14649.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3954bp|location=Sequence derived from alignment at sc0000123_pilon:693468..697421- (Clytia hemisphaerica_ch_hm2_pilon)
TCAAACATAATAATTACAATTCTGTTGATGTATCTTTCTTTTATCTTAGA GTATTTTGTTTAAAAAATGAATGAGATTGAAGAAATAAAGATAAAAATTG AACAAGAAGAAAATCATGGTTGTGATGAAACGAATCTTGAACATTTGGAA ATTGTTATCAAACTGGAAGATGAATCAATCGGATATCCAGATGACGAAAA TATGGAACCATTCAAAAATTATGAAAGTGAACTATTTGAAAATTCTTGTA GAAATGTAAAGGGGAACGATGTTACATCACCCCAAAAAACAAACCCCAAA AATTGTGAAATTATCAATAAACTTGAAGCTGAGTCAAAACCTCAAGATCA TAAGAATGAAAGTGTAAAATTAATGGATATTTCGGAAAATAAAAATTCAG AATATATTAACGATGGAATGAATTGTTTTGATCAGTTTTCACCGATTGAA GAAATTAATTTACAGAATGGGGAGGAAATCACTATTAAATTTGAAGATGA ATTGGAAAGCTTTCACAACCATGAAAATGAAAATTCATGAGGTTGATAAG ATTGAAAATCCAAACATTGACGATATAACGAAAAGTTCGGTTAAGGAATA CCAAAGAACAGTTCACGATAAACCTTTTAAATGTCTTGTATATGGTAAGT CTTTTACATTGAAAAGTAATTTAAAGGTGCATCAAAGAACAGTCCATCAA GGTATAAAACCATTTTTGTGTCAAGAATGTGGTAATATTTTGGAAATAAA ACGAAATTTACTTCCCATCAAAGAACTGTCCATCAAGGCATAAAGGCCTT TAAATGTCAAGATTGTGGTAAATGTTTTGTAGATATAACCAACTTAACTT CTCATCAAATAGCTGTCCATCAACTAGGTATAAAGGCTTTTAACTGTCAG GAATATGGTAAATCTTTTGCTACAAAGTGAAGTTTGGCGATGCATCAAGT AACTGTTCATGAGGGGATAAATCCTTTTGAGTGTCAAGAATGTGGTAAGT CTTTTGGAAGCAAATCGAACTTAACTTCGCACCAAAGAACTGTCCATCAA GGTATAAAGGCCTTTAAATGTCGAGAATGTTGTGAATCTTTTGCTTCTAA GAGAAATTTGGAGCGGCATCAAGTGACAGTCCATCAAGGTATAAAGGCTT TTGAGTGTCAGTAATGTGGTATGCATTTTGGGCGGAAATATGATTCGGAC AGTCATCAAAGAATTGTTCATGAGGGGATAAAGGCATTTGAATGTCAAGA ATGTGGTAAAACTTTTGGACAGAAAAAGAACTTAACTTTGCATCAAAGAA CTGTTCATGGAGGTATAAAGCCCTTTAAATGTTAGGAATGTGGTAAATCC TTTGGACAGAAAAAGAACTTAACTTCTCATGGAATCAAAGAACTGTCCAT GAAGGTATAAAGGTTTTTGAGTGTCAGGAATGTGGTAAATGTTTTGCTAC AAAGAGTTATTTGAAGCGGTATCAATTAACAGTTCATGATGGGATAAATG CCTTCAAATGTCAAGAATGTGATAAATGTTTTGCTACAATGAGTTATTTG AAGCGGCATCAATTAACAATTCCTGATGGGATAAATGCTTTTGAGTGTAA GGAATGTGGTAAATGTTTTGCTACATAGACTTATTTGAAGCGGCATCAAT TAAAAGTTCATGACGGAATAAAGCCTTTTCAATATCAGGAATGTGGTAAA TGTTTTACAGATAAAAGAAAGTTAACTTCTCATCAAAGAACTGTCCATTA ATGTTAAAAAGCCTTTAAATGGCAAGAATGTGGTAAATCATTCGCTTCAA AGATAAATTTGGAGAGGCACCCATGGTAACAATCTTTGACAGAAAACCTT TTAAGTGTCAGGAATATGGTACATATTCAGAGAGGAAGGTTCGATTAATA AAGAAACATGAAGGAGAAGTACATAATAAAGTTTAAAAGATGCGGTCAGT GCATTTAGATTTTTTGTTTGCAGACGTGCCCAAAATGATTTTCACGAGGG ATTGAAAGCTTTTACGTGTGAAAAGTGTTGCAAATCTTTTGCAGGGAAAA CTGATTTGAAGACGCCCTAAGGAACAGGCCATGTGACGAATTGAAAACCT ACCCCGTTGGAGGTCCTTTAAATTAACCCAAGTTTGTGCTTTTCTCGTGA TTGATTTTTTGATTTCAAATTTGTTACTTTCTTTTTTGCATGTAACTGTA TGTTTTTTTCTTTAGAGTATTATTTTTGAAAAATGAATGAAATTGAAGAA AAATAAATAAAAATTGAACAAGAAGAAGTTAATGGTTATGATGAAACGAA ACATGAACATTTGGAAATTGTTATCAAACTGGAAGATGAATCAAATGGAT ATCCAGACGACGAAATTTTGGAACCATTAAAAAGTTATGAAAGTGAACTG TTTAAAAATTCTTCTAGAAATGTAAAGGGGAACAATTTAACCTCATCCGA AGAAACTGACCCCAAAAATTATGAAATCACCATTAAACTTGAAGATGAGT CAAAACATCGATATAATAAGGATCTAAAATTAACATTTCGGAAAATAAAA ATTCAGAAATTATTAATGATGGTACGAATCATTTTGATCAGTTCTCCGTA AATGAAGAAATGGTTTCACAGATTGGGGAGAAAATCAATATCAAATTTGA AGATGAATTCTTTCAAAACCATGAAAATGAAAATATACAGGAATGTTTTG AGGCAGACAAGATCGAAAATCCAAACATTGATAAAATAATGAATAGTTCG ATTAAGGAACATCAATGAACTCTACATGATAAACCTTTTACATGTCAAGA ATGTGGTAAATCTTTTGCTACAAAGTGAAATTTGGTGAGGCACCAAAGAA CAGTCCATGAAGGTATTAAGGCATTTGAGTGTCAAGAATGTGGTCTCTTT TTTGGGCGGAAATATGATTTGGTGAGGCATCATAGAATTGTCCATGAAGG TATAAAAGCATTTGAATGTCAGGAATGTGGTAAATCTTTTGGACGGAAAA CGAACTTAACTTCCCATCAAAGAACTGTCCATCAAGGTATAAAAGCATTT GAATGTCAGGAATGTGGTAAATTTTTTGGACGGAAATATGATTTGGTGAG GCATCATAGAATTTTCCATGAAGGTATAAAAGCATTTGAGTGTAAAGAAT GTGGTGAATCTTTTGTAGAGAAAAGAAATTTAACTTCTCATCAATTAACA ATCCATGAGGGGATAAATCCTTTTGTGTGTGAAGAATGTGCTAAATCTTT TTCTACAAAGAGTTGTTTGGTGAGGCACCAAAGAACAATCCATGAAGGTA TCAGGCCTTTTAAATGTCAAGAATGTGGTAAATGTTTTGCAGAAAAAAGA CAATCAACTTCTCATCACAGATTTGTCCATGAAGGTATAAAGCCTTATTA ATGTCAAGAATGTGGTAAATGTTTTGCTACAAACAGTTATTTGAAGCGGC ATAAATTACTAGTTCATGATGAGATAAAGGATTTTGAGTGTCAGGAATGT GTTAAATGTTTTGCTACAAAGAGTTATCTGAAGCGGCATAAATTAACAGT TCTTGACGGATAAAGGCTTTTGAGTGTCAGGAATGTTGTAAATCGTTTGG AGAGAAATCGAACTTAACTATGCATCAAAGAACTGTTCATCTAGATTAAA AGGCCTTTAAATGTCAATAATCCAAATTAAATCTCTTGCTACAAAGATTT ATTTTTAAAAACCCCAAGGAACTGTCCATGATAAAGCCTTTTGAGTGTCA AAACTATGGAAATTCTTTTGCTGAAAAAGGTTCGTTATAGAAACATCAAA GAAAAGCACATGATAAAATCTAACCTTTTCAATGTCATGGACGTGGTCAA TCTGTTGTATTTAGATTTTTTTACAGACGCATCAAAAGGATGTTCACGAG AGAATGAAAGCTGTCCAGGGAAAGTGTGCATCAATTGTGCGTTTTTGACT AGAA

Coding sequence (CDS) from alignment at sc0000123_pilon:693468..697421-

>MSTRG.14649.5.p1 ID=MSTRG.14649.5.p1|Name=MSTRG.14649.5.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=474bp|location=Sequence derived from alignment at sc0000123_pilon:693468..697421- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAATGAGATTGAAGAAATAAAGATAAAAATTGAACAAGAAGAAAATCA
TGGTTGTGATGAAACGAATCTTGAACATTTGGAAATTGTTATCAAACTGG
AAGATGAATCAATCGGATATCCAGATGACGAAAATATGGAACCATTCAAA
AATTATGAAAGTGAACTATTTGAAAATTCTTGTAGAAATGTAAAGGGGAA
CGATGTTACATCACCCCAAAAAACAAACCCCAAAAATTGTGAAATTATCA
ATAAACTTGAAGCTGAGTCAAAACCTCAAGATCATAAGAATGAAAGTGTA
AAATTAATGGATATTTCGGAAAATAAAAATTCAGAATATATTAACGATGG
AATGAATTGTTTTGATCAGTTTTCACCGATTGAAGAAATTAATTTACAGA
ATGGGGAGGAAATCACTATTAAATTTGAAGATGAATTGGAAAGCTTTCAC
AACCATGAAAATGAAAATTCATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14649MSTRG.14649Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14649.5.p1MSTRG.14649.5.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14649.5.p1.exon2MSTRG.14649.5.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14649.5.p1.exon1MSTRG.14649.5.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000123_pilongenomesc0000123_pilon:693468..697421 -