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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000122_pilon:410502..414623- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14577.1.p1 ID=MSTRG.14577.1.p1|Name=MSTRG.14577.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4122bp|location=Sequence derived from alignment at sc0000122_pilon:410502..414623- (Clytia hemisphaerica_ch_hm2_pilon)
AATTTGATTATCACGCATGCGTATTAGTGTCAAAAAAGAGCAATGCGTAG
GAGGGCGCAGCAAAAAGGTTTTCCAGGAAAGTACAAGAAGTTGTGATGTG
ATCGTCTTGTCTATAAACTCAGCACGTGTGGATAAAGTTTCAGAAAGCAC
ATCATATTACTTATCCGGATGAATATCGAAGAAATGACAAGATTCAAGCC
TTATTGTGTTTACAATTAGCTGATATGTGGTATGAAACCTTTTTTATTTT
GTCAGATCTGTCAACATTTCTCTTCTCTGTTGACACTACTGTGAGAGAAC
CTTAATTTTTGGTTTGCTCAAATTTTGTTACCAGTTACTTATACCAACTG
CTTACTGTCTGGAACTGTGGAAAATAATTCAGTTCTCAGATTAAGATTCT
TGGCGCCTTTCATTCCCCTTATGTTTAGAAAATTGAAAATTTTTATAATT
TGAAAAAATTTGTTGTTGGAAAGTTGTTTTTCATGCAAACAATGAATTCT
CAAATTTGTTTGCCAATATAAACAAGACGTTGATTCTAAGGGAAATTTTT
GCATTGAATGAAATTTGACCATGTTAAATCGCAATTTAATTCAGATTTAA
TTGCAATTTAATTCAGATTTAATTGCAATTTAATTCAGATTTAATTGCAA
TTTAATCCAGATTTAAGCCTAATCTTTTTCGAACAACTAGGGCCCATGCC
CAGGGTATCATTTTTAAAAAATCAGCATAAGAAATAGAAATTCAAAAATT
GAAAATTTTCCAATATCTGCTGGCGAGCGCATTGTGCTCCTTTGGTGCAG
TTTGATGCTAAAATATATAAATTATATATAACATGATTTGATATATAAAT
TTATTAATAATTTATGTTGGTTTTTAAAGGATTTTCCCTCAAAAATGGCT
TCAGATCTTTCCAATATGAGATAAAAGAGATAAAAGCAAGCTAAGCCATG
CATACATCATGAATCGAAGTAACGAAAGTGCCAAATGAATTTCAAATTTT
GAAATTTGAAAAGAAGTAAAAATTTTCAAATTTCAAAATTTGAAAAATGA
AAAATACAAAAAAATTTTGATTTTCAAATTTTGAAATTAAAAAAAATTGT
TTATACCCCAATCGACGTAATAAAAGTGCCAAAAGAGGTTTTTAAATTTT
AAGTATGAATAAATTGGGCTATTCCATTTTTAAACTGTACAGGGGTATTG
ACGAAATTTTCAAGGGGGGCCTAAGCCTTGATTTTCCAAGGGGTTTTTGT
TCCTTTTTCAGCTTTTCCAAGGGGGTTATTCAAGGTTTATAGGGGGTTCT
CCCCTCATAAACTGACATCAGTTGTTTTCCAGCCGTTTTTCACAAAATTT
AGTTTTCCAGAGGGTTTGTATCCCAATTTCCAGGGGATAATTTGCTATTC
AATATTTCCAGGGGGGCTAGTGAAAAAAGTTCGTCAATACCCCTGTATAA
TTTTTTTTAGAATAGCCCATTAGAAGGTTAGCAATCTGTGTTGACGTCAA
CAGGAGGTACACTAAAAGTGCAATAATTACCTAAAGCCCTGCAATTCGAG
TGATTCTATCTTTGAGAGAATTGATTGGTTGATTAATGTCACGTGACCCG
TCAATAGACTTTTTGTTCCTAGTATACAGAAGTGTGATTTGCACACACTG
TAACATCATAATTTGACCTTAAGAACGTTTAGGTAATCAACTTTACCATA
TAAGGCAAAGAAACCACGTTATGGGGGTTTAGAACGATGTTTACTTTCGA
CTAATATAGCCTAATATCTGAGACAATAGGCAAAAAACAGGTGGATATTT
TGTCCCTTCAATTTCACGAATATGTTTTTTCAAAGATAATTCTATTAGTT
TGCTTCTTAAATTTCAGATAAATGAAAAAAGTGTGACAAATATAATTTTT
AAAATTTAAACCTTTAATTGGCACTTTTATTACAACGAGCTTTGTCCAAT
TTTAAGCAATACTAAAAATTTTCCATTTTTCATTTTTCAAATTTTGAAAT
TTGAAAATTTTTACTTCATTTTAAATTTCAAAATTTGAAAATCATTTGGC
ACTTTCGTTACTTCGATTCACACACGGTATTGAAAGTGGCAAGTATTTTT
CTAAATTTTGAAAATTAGAAAAATGAGAAATTTCATGAATTTGAAAATTT
GAAAAATGAAAAATCTCCTAAATTTTCAATTTTGTCAAATTTGACAACAA
GTCCTTGTATCAAAAGTGCCAAAGCAATTATTGATGATTTTTCTTATTTC
TAGGTAACATGGATTCAGAACAAAGCTTGGAAAACTGGTTCAACCAATCT
GTCCAAGTCCAGAAAGGGAAGTACTGTTTCGTACAATCATTATTAGAGAG
TTATGAAATTTTTTGTCAAATTACCACTAGCACAGATGTTTTTCTTGACA
AATTGAATGTGTTTTTATCAAAAAATGGTATTCGGGTATCACATGAGAAA
AAAAGATTCAGGCGTCTTAAAAAAGGAAAGGAAATGGTTATACATGGTAT
ATGCCTTTCTAATAATATCTCTGCTTCAGTAATCTCTTCTGCTCCTAGTT
TTTCACCTCCAGTCAATTTGACTTCAAACATTTCAATGTCTCAATTGAGC
ATCCATAAACATTCATCCAAACCAATCCCAGAAATACCACATTCTGTTGA
ACGCTATTGTACCAAAGCTGATTCTGCTAATGTTCCTGATGTTTGTGGTG
AGGGGTCAAGGGAAGATGTCTTGAAAAAAATCAAATTTATTGATGTTGGG
GGTAGCTGTGAGTCGGACATTATGACTAAGAGTAGTGCTTCATTTAAAAG
TGCCCCAAGTAACACCATGTCTTTGCTTACTTCTGTCTCTACAGAAAGTG
TTACTTCACCAGATTCACCAAATCCAGAAATACCACATTTTGAGGTCTGC
TGTGGGAAAACTGATTCTTGTCTGGAAGATATTTATGAGAAGACAATGGA
AGATGACCAGATAACAACTCAACTTGGTTTTAGATTTTGCAGTGACTCTG
AAATCATAACCAAGAACAGTGCGTCACCAAAAAATGTCCCAGATGATTTT
GGTGCTATGGCCTTTGATTCTGCCTCTAGTGACTTCGATCCTTTGCCTCA
AAGTTCTTTCAAAGTTGCCCTGTCCAACTGTTCTTCACCTGAACTTAAGG
AAAGCTTTCCTGCATACCAAAGCTTTGATGATTATGAGGATGATTCAATT
GAAACAGTCTGTTCTCCACCCCTCAGCCTGGAAAGCAGCCACTCTTCCAG
TGTTATTGATGAATCTGATTCTGTAGTGGACAATATCTTAAAACTTAATC
CAAACACATTGGATGCGTATTTCCATAAAACAAATGAAATAGTGACTCCA
GCCTTTGACAAACCTGTTTTTCAAGAGAGAAATTTCCATTTTAGACAACC
AATAAAGGAGAAATATTTTTGCAATTTGATATTTTCAAGACACTACAGCA
ACGTGAAAAACCTCACTCCTGCTAATATGCCCGTTCAATTTCAAAGCTTT
GAGGATTTTTTGGATTCCCAATTACCAGATTATGATAATGTACCTCAGAA
GCTTCAAGAGCTTGTCCAATCAGCTAAGGCAAATAAAGATCCTGCTGAGT
TAAAAATGAAAGCATTTTTATGTGGTTCATTTCCTCCTATCCTAACTGGG
AACACAGCGCACAAAACAATCATTGACCTGGCTCCTAATATTCAATTCCC
TCAGTTTTCTGTGCTTAGCTATGCCAATAATCTGAGATTTGCTTGTAATG
TTTGTAAAGTTTTTGCCCCTTATGCTCAATTGCTCAATTGCATGGTCGTA
GCTGTATGGTTGGTACTGGTGAGTTTGTTGGCTTTAGGCAAGTATACGAG
CATGCATTGTCAGCCCATCATAACTATGTTATTGATTATCTCATGGAAAA
AAATGATCTGGATGACTTCCTACCCAAAAAGAGTGAAAAAGTTGTTACTG
ATTTTTTTCCAGTTGAGAGAAAAGGTTCACGAGTTGCTTGTCATTATCTG
TGGCAGCATGACATTGTAAACTGTTTTAGAGATGATCGTAGAATTAGAAC
AAAACAAGCAGAAACATTGTTTAAAGAGAGAAAACCTTGGAAGAGATGTC
TTAAAGAGAAAGGGCATAAAAA Coding sequence (CDS) from alignment at sc0000122_pilon:410502..414623- >MSTRG.14577.1.p1 ID=MSTRG.14577.1.p1|Name=MSTRG.14577.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1761bp|location=Sequence derived from alignment at sc0000122_pilon:410502..414623- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATTCAGAACAAAGCTTGGAAAACTGGTTCAACCAATCTGTCCAAGT
CCAGAAAGGGAAGTACTGTTTCGTACAATCATTATTAGAGAGTTATGAAA
TTTTTTGTCAAATTACCACTAGCACAGATGTTTTTCTTGACAAATTGAAT
GTGTTTTTATCAAAAAATGGTATTCGGGTATCACATGAGAAAAAAAGATT
CAGGCGTCTTAAAAAAGGAAAGGAAATGGTTATACATGGTATATGCCTTT
CTAATAATATCTCTGCTTCAGTAATCTCTTCTGCTCCTAGTTTTTCACCT
CCAGTCAATTTGACTTCAAACATTTCAATGTCTCAATTGAGCATCCATAA
ACATTCATCCAAACCAATCCCAGAAATACCACATTCTGTTGAACGCTATT
GTACCAAAGCTGATTCTGCTAATGTTCCTGATGTTTGTGGTGAGGGGTCA
AGGGAAGATGTCTTGAAAAAAATCAAATTTATTGATGTTGGGGGTAGCTG
TGAGTCGGACATTATGACTAAGAGTAGTGCTTCATTTAAAAGTGCCCCAA
GTAACACCATGTCTTTGCTTACTTCTGTCTCTACAGAAAGTGTTACTTCA
CCAGATTCACCAAATCCAGAAATACCACATTTTGAGGTCTGCTGTGGGAA
AACTGATTCTTGTCTGGAAGATATTTATGAGAAGACAATGGAAGATGACC
AGATAACAACTCAACTTGGTTTTAGATTTTGCAGTGACTCTGAAATCATA
ACCAAGAACAGTGCGTCACCAAAAAATGTCCCAGATGATTTTGGTGCTAT
GGCCTTTGATTCTGCCTCTAGTGACTTCGATCCTTTGCCTCAAAGTTCTT
TCAAAGTTGCCCTGTCCAACTGTTCTTCACCTGAACTTAAGGAAAGCTTT
CCTGCATACCAAAGCTTTGATGATTATGAGGATGATTCAATTGAAACAGT
CTGTTCTCCACCCCTCAGCCTGGAAAGCAGCCACTCTTCCAGTGTTATTG
ATGAATCTGATTCTGTAGTGGACAATATCTTAAAACTTAATCCAAACACA
TTGGATGCGTATTTCCATAAAACAAATGAAATAGTGACTCCAGCCTTTGA
CAAACCTGTTTTTCAAGAGAGAAATTTCCATTTTAGACAACCAATAAAGG
AGAAATATTTTTGCAATTTGATATTTTCAAGACACTACAGCAACGTGAAA
AACCTCACTCCTGCTAATATGCCCGTTCAATTTCAAAGCTTTGAGGATTT
TTTGGATTCCCAATTACCAGATTATGATAATGTACCTCAGAAGCTTCAAG
AGCTTGTCCAATCAGCTAAGGCAAATAAAGATCCTGCTGAGTTAAAAATG
AAAGCATTTTTATGTGGTTCATTTCCTCCTATCCTAACTGGGAACACAGC
GCACAAAACAATCATTGACCTGGCTCCTAATATTCAATTCCCTCAGTTTT
CTGTGCTTAGCTATGCCAATAATCTGAGATTTGCTTGTAATGTTTGTAAA
GTTTTTGCCCCTTATGCTCAATTGCTCAATTGCATGGTCGTAGCTGTATG
GTTGGTACTGGTGAGTTTGTTGGCTTTAGGCAAGTATACGAGCATGCATT
GTCAGCCCATCATAACTATGTTATTGATTATCTCATGGAAAAAAATGATC
TGGATGACTTCCTACCCAAAAAGAGTGAAAAAGTTGTTACTGATTTTTTT
CCAGTTGAGAGAAAAGGTTCACGAGTTGCTTGTCATTATCTGTGGCAGCA
TGACATTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000122_pilon | genome | sc0000122_pilon:410502..414623 - |
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