MSTRG.14569.1.p1 (mRNA) -

Overview
NameMSTRG.14569.1.p1
Unique NameMSTRG.14569.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000122_pilon:258055..262221-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14569.1.p1 ID=MSTRG.14569.1.p1|Name=MSTRG.14569.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4167bp|location=Sequence derived from alignment at sc0000122_pilon:258055..262221- (Clytia hemisphaerica_ch_hm2_pilon)
GAAGATCGTAAAAAAACAACAACAACAACATAAAAATGAATAGTGTGGAC
CAATGTTTTGAAAAGCACCGAAAGAACTTTTGTCGTAAAAAACTCAAACG
AAATGTTATCAGCTTCATCATCTCTGTGGTGGTGGGAATGACTTTCATGG
TTCTGGCTGCTCTCCTGTATTTCTATATTGAGCATTGTTCACATCCTTAC
ACGCCAAAGGTTGATAGCTCTTGGCAACTTTGCCAGTACCTCAAAGAAAA
CACTACCATCGAGCTAAACAACCATTCAATGCTGGAAACGTTATGTCAAA
ACATGCAAGCTCCTGAGAATGTCACATGTGAAATGACGCAGACAATTTTC
TTTAGATATTTTGATCTAACCTCAACGATGGCTTATACTGTTGGTATGTG
AAACAAACATTTTTATTTAGTTTACTTAAATCATGTTCTTCATTTTATCT
AGAAGTAATGTGCTTGTTATGCGCCCATAAGCCCAGGTTTTAGAGCAAGG
TTTTTCGTCTGAGAAAACTTTAAACACTAATAGTTCCGTTGTTATCTGAT
TCATTCAAAATCTTCTACACAGGTTACGGACATGTATACCCAATGACAGA
CGCAACCAAACTATTGACCATCTTCGTTGTACTTCCACTGATAGCTCTGG
CGATGACCAGTTACATATTTGCTGGCAAAGTCATCACTACTTTGACAAGT
ATTGTTCTTCTCATCATTAGACAACAAGTAGGTGGCTTTTACAATGTCCA
TTACATCATTACCGAAGATCAGTTGAAACTTCAAAAATTTCATTTAGCTC
CCAAATCAATACTTGCGTTTGTAGTTGATTCACAGGAAATTTCGAGATTT
AGCAAAATGATCGTACCCCTGTCTAGAAAAGCACCAGTGCCAAATTCAGC
GTGAGTTTGAGGTCTGCTCGATTTCGCATATAGCAACCATTCAAATTCAC
GAAAACTAGTTGTTTGTGTGAAATAAACACGAAAATATCCGGAGAATTGA
GTAACTTGAACTCAAGTTAAGTCAGTCCTACATAGTTTCACTTTACGAAT
ATCACTTTCATATTTCATTGCAGCTCTTCGGCATCCGCCATGCAAGATAT
TTTTCAATATGTTTGTTGGGCGTTCAATTTTGCATGATGATCGCCTTGTC
AATGGGGTTCGCAGCAATCGATTACAAAGTCCACGAATCATCTAAGAGAT
CTTTCCTTGGTAGGTTTGAAGTGTTAAACAGTTCACCCAAACCAGACATG
ACGCAACGAGTACCAGATTTTCTCAAAAAAAAAACCAAAATTTTTCTCTT
CGTCGGTAAAATCGCTTAAATTTCCTTATTCGACGTACCAGATATAAAAA
GCCTGCCGTGCCTGCAGATATTTTCAAGACATAAAATTCCACCTGTGTCA
GATGAATTTATGACGTTATTTTTAGTAAAGTTGACCTCTCTTAACCCTTC
AATGTTCAATTATTCAACAAAGCAATGTTTTTTTTGTGTCAAACAGAACT
TGAAATTTACATAAACAATTAGCCCTGCTTCTCCAAATTTTGCACAATTT
AACTGAATTTTGAAGACAGAAAAATATCTTTGTATACTTCACTGAGACGG
AAAAACTTTGAACACAGTCTTAGCGTGACTCAGAAATCCAAAATTATGCA
GTCAAAACTTATGATTACTCGAAAAAGTTTACGTGATTTTATTCCTATGT
TACTTGCTTTATAACTTACAGGTGTATGGTGGCCCATAAGTGCCAAGTAA
TTTTTTATTGAAAAAACATTTTTTTTATAAATGAAAATAACTTTCATTTT
ACAATTTAAATTAACTTTCATTTCAAAATCAATTTAAAAGTAATTTCGTT
TTCAAAATGACTTTAAAAATAACTTAAAATACGACCCAGCAAGGCCACAC
AAATGATTTAAATTTTGTTTTAATTCTCATTTACTTTTCGATATCTTTTT
AAAAAGCATTTTGTTTTTTTATTTTTAAAATCACTTTTCTCACGTAGCCC
ATCAGTGCCAAAGACAGCTTTGTCTTCAGACCCCTACAGGCTTAAAAGAT
TGAAGTTACTATGGTTACTTATTGGTTTGTTTACAGTTCACGGCCCATCA
AGGCCAAAACAACTTAGTGCTTAAACCCCAAACATTTTTACAAATGTGTA
GGAGAGTATAAAATGATATCCTTTACTCCAGTGTTCTATGGTACCATAAA
TGAGAGATTTTTTGTCCGTCACAGTGCTTTTCATTTCTATTATTCATTGT
TTGGCTGGTGGGTTGTATTGTCTTGAAAATTTACTTCTTTTTGCAGACAA
AATTATTCATCAAACAATGGGCAACATGAAAGAGCCTTTGTTTTGATGTG
TAAATAAAGAGTCGAATTTTTTCTTAATATGCAGCATGCGAGCATGAAAG
TAAAAAAATGGTGAGAAGAGAGGAAATACACTTTTTTTTATATAAGAACA
ATTTTATAAGAACAATGAGGCTCAAAAATGCCCAAAAATAAGAACAATTT
AAGAACAGTGGAGGGGCTGAAGTTAGAGAGTTATAGCAAAAAGAATCACT
GGTTTCTAAATCCTCTAAATAGTAAAGTAAATAGCCAAAATAAGAACAAT
TGAAACAAAAAATTAAGAACAGCTGAGCCTCAGCAAAAATTTACTGGTTC
TTATAAAAAAAGAGTGTAATAGGAGGGAAGTTTTATTTACTTCCAACCCC
TTTGCCGCCATATTGACCCCCCCCCCTAAAACAAACAACTGGTTCGTTCT
ATTATCAAAAGAAACTTTATCTGTTGAAATTTACTCATTTATATGAATGG
CCTCAATGGGCTGTCAGATCAATTCATTTAAAAATAATTAAAATTGATTT
TAAAATGACATGGCCTCGATGGGCTGAGCTGGAAATCATTTTTGAAAACA
AACCCGTTTTAAATTTGAAACGAAAATAGAAACTAAATCAATTTTGAAAT
CAAAATTTAGTTCAAAATTTAAATTAAAAGCTATTGCAAAAGTGAATGTG
GAAAGTAAAGTATTTTGAATTTTTTATATAAAAATGTCAAAACAATTTAA
CTTGGCTCTCATGGGCCACCATACAGGTGATAACTTTATTAATGTCAACA
AATTTGAACCAATCAGAAATAAATGTCATGTAACAAGCACATAAGAATTT
TGAGTAAAAGCGTGATTTGTCTTCAAAATTTATTTTTGCAACCTGTTTAT
TCGTCTAATCAACATTTGAATGAATTTTTTTCATTTCTAGATTCAATGTA
CTGGTCGATGGTAACGATATCAACAGTTGGCTTTGGTGATTTCTATTGGA
GCAGTGAAGAGTATTTCAACGCGGGAATACATTATTTAGTCTTAGTCGTG
TTTTGTTTCCTATTCGCAATGGGAACTTTCGCTTCAACGATCACACAAGT
TTGTGAGTTAATTGGTGATTACTCAAAGCGAACGTATCAAAAACAAATGT
CAAAGCGAAAAACAAAGAAGCTAGAACGTTCTTTGAGAGAGAACAAAAGT
TTTGCAAATTTCAATGCTACTGAAGAAGTTGAGATTTATTCACAAAAGGA
GATTGAAATTATTCAAGATGTGACTTGGTATAAAATACATCAACGCAAAA
GAAGACATTCTCTGCCAGAACGCATGTAGCCTGAGTTCGTAAGGTGAATG
CTGGAAAAAGAAACCTTTAAAACTTAAGTAGTTGCTCCTGATAACAACTC
TTTGTGCAATTTCAACGTTAAAACTTCTAACGATACTTTAACGCAGAAAT
GCGCTATTCTTATAGTGGAGTTTTTTGTTTCTTAATCGCGAATGGAACTT
TTTCATCAACGATCACACAAGTTTGCGAGTTAATTGGTGATTACTCAAAG
CGAACGTATCAAAAACAAATGTCAAATCGAAAAACAAAGAAATTAGAACG
TTCTTTGAGAGAGAACAAAAGTTTTGCGAATTTCAATGCTACTGAAGAAG
TTGAGATTTATTCACAAAAGGAGATTGAAATTATTCAAGATGTGACTTGG
TATAAAATACATCAACGCAAAAGAAGACATTCTCTACCAGAACGCATGTA
GCCTGAGTTCGTAAGGTAAATGCTGGAAAAAGAAACCTTTAAAACTTGAG
GAGTGCTCTTGAAAACAACTCTTTGTGCAATTTTGACGTTAAAGCTTTTA
TCAATATTTTAACACAG

Coding sequence (CDS) from alignment at sc0000122_pilon:258055..262221-

>MSTRG.14569.1.p1 ID=MSTRG.14569.1.p1|Name=MSTRG.14569.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=4152bp|location=Sequence derived from alignment at sc0000122_pilon:258055..262221- (Clytia hemisphaerica_ch_hm2_pilon)
ATTCAATGTACTGGTCGATGGTAACGATATCAACAGTTGGCTTTGGTGAT
TTCTATTGGAGCAGTGAAGAGTATTTCAACGCGGGAATACATTATTTAGT
CTTAGTCGTGTTTTGTTTCCTATTCGCAATGGGAACTTTCGCTTCAACGA
TCACACAAGTTTGTGAGTTAATTGGTGATTACTCAAAGCGAACGTATCAA
AAACAAATGTCAAAGCGAAAAACAAAGAAGCTAGAACGTTCTTTGAGAGA
GAACAAAAGTTTTGCAAATTTCAATGCTACTGAAGAAGTTGAGATTTATT
CACAAAAGGAGATTGAAATTATTCAAGATGTGACTTGGTATAAAATACAT
CAACGCAAAAGAAGACATTCTCTGCCAGAACGCATGTAGCTCTTCGGCAT
CCGCCATGCAAGATATTTTTCAATATGTTTGTTGGGCGTTCAATTTTGCA
TGATGATCGCCTTGTCAATGGGGTTCGCAGCAATCGATTACAAAGTCCAC
GAATCATCTAAGAGATCTTTCCTTGGTTACGGACATGTATACCCAATGAC
AGACGCAACCAAACTATTGACCATCTTCGTTGTACTTCCACTGATAGCTC
TGGCGATGACCAGTTACATATTTGCTGGCAAAGTCATCACTACTTTGACA
AGTATTGTTCTTCTCATCATTAGACAACAAATGAATAGTGTGGACCAATG
TTTTGAAAAGCACCGAAAGAACTTTTGTCGTAAAAAACTCAAACGAAATG
TTATCAGCTTCATCATCTCTGTGGTGGTGGGAATGACTTTCATGGTTCTG
GCTGCTCTCCTGTATTTCTATATTGAGCATTGTTCACATCCTTACACGCC
AAAGGTTGATAGCTCTTGGCAACTTTGCCAGTACCTCAAAGAAAACACTA
CCATCGAGCTAAACAACCATTCAATGCTGGAAACGTTATGTCAAAACATG
CAAGCTCCTGAGAATGTCACATGTGAAATGACGCAGACAATTTTCTTTAG
ATATTTTGATCTAACCTCAACGATGGCTTATACTGTTGATTCAATGTACT
GGTCGATGGTAACGATATCAACAGTTGGCTTTGGTGATTTCTATTGGAGC
AGTGAAGAGTATTTCAACGCGGGAATACATTATTTAGTCTTAGTCGTGTT
TTGTTTCCTATTCGCAATGGGAACTTTCGCTTCAACGATCACACAAGTTT
GTGAGTTAATTGGTGATTACTCAAAGCGAACGTATCAAAAACAAATGTCA
AAGCGAAAAACAAAGAAGCTAGAACGTTCTTTGAGAGAGAACAAAAGTTT
TGCAAATTTCAATGCTACTGAAGAAGTTGAGATTTATTCACAAAAGGAGA
TTGAAATTATTCAAGATGTGACTTGGTATAAAATACATCAACGCAAAAGA
AGACATTCTCTGCCAGAACGCATGTAGCTCTTCGGCATCCGCCATGCAAG
ATATTTTTCAATATGTTTGTTGGGCGTTCAATTTTGCATGATGATCGCCT
TGTCAATGGGGTTCGCAGCAATCGATTACAAAGTCCACGAATCATCTAAG
AGATCTTTCCTTGGTTACGGACATGTATACCCAATGACAGACGCAACCAA
ACTATTGACCATCTTCGTTGTACTTCCACTGATAGCTCTGGCGATGACCA
GTTACATATTTGCTGGCAAAGTCATCACTACTTTGACAAGTATTGTTCTT
CTCATCATTAGACAACAAATGAATAGTGTGGACCAATGTTTTGAAAAGCA
CCGAAAGAACTTTTGTCGTAAAAAACTCAAACGAAATGTTATCAGCTTCA
TCATCTCTGTGGTGGTGGGAATGACTTTCATGGTTCTGGCTGCTCTCCTG
TATTTCTATATTGAGCATTGTTCACATCCTTACACGCCAAAGGTTGATAG
CTCTTGGCAACTTTGCCAGTACCTCAAAGAAAACACTACCATCGAGCTAA
ACAACCATTCAATGCTGGAAACGTTATGTCAAAACATGCAAGCTCCTGAG
AATGTCACATGTGAAATGACGCAGACAATTTTCTTTAGATATTTTGATCT
AACCTCAACGATGGCTTATACTGTTGATTCAATGTACTGGTCGATGGTAA
CGATATCAACAGTTGGCTTTGGTGATTTCTATTGGAGCAGTGAAGAGTAT
TTCAACGCGGGAATACATTATTTAGTCTTAGTCGTGTTTTGTTTCCTATT
CGCAATGGGAACTTTCGCTTCAACGATCACACAAGTTTGTGAGTTAATTG
GTGATTACTCAAAGCGAACGTATCAAAAACAAATGTCAAAGCGAAAAACA
AAGAAGCTAGAACGTTCTTTGAGAGAGAACAAAAGTTTTGCAAATTTCAA
TGCTACTGAAGAAGTTGAGATTTATTCACAAAAGGAGATTGAAATTATTC
AAGATGTGACTTGGTATAAAATACATCAACGCAAAAGAAGACATTCTCTG
CCAGAACGCATGTAGCTCTTCGGCATCCGCCATGCAAGATATTTTTCAAT
ATGTTTGTTGGGCGTTCAATTTTGCATGATGATCGCCTTGTCAATGGGGT
TCGCAGCAATCGATTACAAAGTCCACGAATCATCTAAGAGATCTTTCCTT
GGTTACGGACATGTATACCCAATGACAGACGCAACCAAACTATTGACCAT
CTTCGTTGTACTTCCACTGATAGCTCTGGCGATGACCAGTTACATATTTG
CTGGCAAAGTCATCACTACTTTGACAAGTATTGTTCTTCTCATCATTAGA
CAACAAATGAATAGTGTGGACCAATGTTTTGAAAAGCACCGAAAGAACTT
TTGTCGTAAAAAACTCAAACGAAATGTTATCAGCTTCATCATCTCTGTGG
TGGTGGGAATGACTTTCATGGTTCTGGCTGCTCTCCTGTATTTCTATATT
GAGCATTGTTCACATCCTTACACGCCAAAGGTTGATAGCTCTTGGCAACT
TTGCCAGTACCTCAAAGAAAACACTACCATCGAGCTAAACAACCATTCAA
TGCTGGAAACGTTATGTCAAAACATGCAAGCTCCTGAGAATGTCACATGT
GAAATGACGCAGACAATTTTCTTTAGATATTTTGATCTAACCTCAACGAT
GGCTTATACTGTTGATTCAATGTACTGGTCGATGGTAACGATATCAACAG
TTGGCTTTGGTGATTTCTATTGGAGCAGTGAAGAGTATTTCAACGCGGGA
ATACATTATTTAGTCTTAGTCGTGTTTTGTTTCCTATTCGCAATGGGAAC
TTTCGCTTCAACGATCACACAAGTTTGTGAGTTAATTGGTGATTACTCAA
AGCGAACGTATCAAAAACAAATGTCAAAGCGAAAAACAAAGAAGCTAGAA
CGTTCTTTGAGAGAGAACAAAAGTTTTGCAAATTTCAATGCTACTGAAGA
AGTTGAGATTTATTCACAAAAGGAGATTGAAATTATTCAAGATGTGACTT
GGTATAAAATACATCAACGCAAAAGAAGACATTCTCTGCCAGAACGCATG
TAGCTCTTCGGCATCCGCCATGCAAGATATTTTTCAATATGTTTGTTGGG
CGTTCAATTTTGCATGATGATCGCCTTGTCAATGGGGTTCGCAGCAATCG
ATTACAAAGTCCACGAATCATCTAAGAGATCTTTCCTTGGTTACGGACAT
GTATACCCAATGACAGACGCAACCAAACTATTGACCATCTTCGTTGTACT
TCCACTGATAGCTCTGGCGATGACCAGTTACATATTTGCTGGCAAAGTCA
TCACTACTTTGACAAGTATTGTTCTTCTCATCATTAGACAACAAATGAAT
AGTGTGGACCAATGTTTTGAAAAGCACCGAAAGAACTTTTGTCGTAAAAA
ACTCAAACGAAATGTTATCAGCTTCATCATCTCTGTGGTGGTGGGAATGA
CTTTCATGGTTCTGGCTGCTCTCCTGTATTTCTATATTGAGCATTGTTCA
CATCCTTACACGCCAAAGGTTGATAGCTCTTGGCAACTTTGCCAGTACCT
CAAAGAAAACACTACCATCGAGCTAAACAACCATTCAATGCTGGAAACGT
TATGTCAAAACATGCAAGCTCCTGAGAATGTCACATGTGAAATGACGCAG
ACAATTTTCTTTAGATATTTTGATCTAACCTCAACGATGGCTTATACTGT
TG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14569MSTRG.14569Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14569.1.p1MSTRG.14569.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14569.1.p1.exon4MSTRG.14569.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14569.1.p1.exon3MSTRG.14569.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14569.1.p1.exon2MSTRG.14569.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14569.1.p1.exon1MSTRG.14569.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000122_pilongenomesc0000122_pilon:258055..262221 -