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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000122_pilon:240533..242994- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14567.1.p1 ID=MSTRG.14567.1.p1|Name=MSTRG.14567.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2462bp|location=Sequence derived from alignment at sc0000122_pilon:240533..242994- (Clytia hemisphaerica_ch_hm2_pilon)
AGAACGCATCGTAATAACTGACAAAAAAGATCAACAATGCATAAATAATC
AGCCTTGGAAAAAGATATCACCGAATAAATGCAACAGAATTAGTTAAAAC
CCAATGGAACTAATAAAAGCAAGAAAGTAATGGTAATAGCCACGAAAAAG
TCAAATTGAAAAAAGAGTACTTTTTACCTGGGACAAAAGAATACAAGAAA
AATGAGAACAACAAGTCATAAACAATACAAACCAAAGAGTCAAGAAGATG
ACGAAACACGCCACGAAATCAAAATCCAAATCAAAAACTTAAAAAAAAGT
TTCAAGATGTTCGTCATATATTTCATAGTGGTTCTATCAATCTACATTGT
TCTAGTGTTCTTATTTTTCTACATAGAACATTGTTATGATCCAGTCATAC
CAACCAAAACACCAAAACACAAACTCTGGCAACTTTGCCAACATCTTGAG
AAGAATCTGACAATGGATATTCACAATGATACAGTGTTATCACCATTGTG
TAAGAATCACAGAGAACCTTATCGTATAAGTTGCCAGCTGACGACAACGA
ATTTCTTCAAATATTTTGATTACGTTGCAAGTATATCGTTCACCTTAGGT
AAGGCTTATTCATTTATCTGATATTCCGATAGCGGATTGGCGGTCGCCCA
CGCTAAAGCTCTAAAGGAGCAAGCCAGTTTCCCATCGGAGAGGAATGATA
GTCGGCCTTTGATGTGCCGCACACAGATATCTGTAAAGCCCGAAGGGCTA
GATTTGGTGCCGCACCCCAGTGGGGTTCAAAAACCCTTGTGCGTAAACCT
ATTAATATTTCGGTTGGACCGGCCAATCCCCGAAAACGAGGGCTGGGTTA
CCAGACCTCCCGCTGCAAAATCCTTGACGCGGACTCGCAAAATTCTGTAA
TGTAAACCTTCCAGATGTTGAAAATTTTCCCGACCTTCAGAGCTTTAGCG
TGTCGGATGAAAATTTCATCATCTGGGTGCCAGATAACTTATACATAAGA
CAACACGTTACGGTACGGTATTGCTTATAGACCCGGGAGGAAGTTTCTTA
ATTCCGGTCAACCAAAATCTTTAATCGTAGTTTTTTTGTGGCACTCTATG
GTAACACTACTCCATAAAGGTATAAATTTGTCGAGAGCGAATTTATTAGA
AATTAGAAGAGCGAAATTAGAAGAGGAATGTCTACTGTGTAGTCCAGAAT
TTATAAAGGTCAAGAAGCTTTTTCAATGTTTAGAAATGGTAGATCACAGA
AAAGTCTAAAAAACAACATTTTATATTGAAATGTCACATCAACGAGGACA
TTATTTTATAAAACCTAGAGGATCGCAGGATTCTTTCAGGTTAAAATTCC
ACAGGGTCAACAGCCAAGGTGGGTTTTCTAGTAGAAGGTTCTGAATATGT
CTGCATAGTCTAACATGTTACTTCAAACGGGTTCCGTGTCAGTGAAAGAG
AGTGCAACAAACTTTAGATAGAGCTCCAAGGGGGTTAGATTCCATAAAAA
TAACCTCCTCTGTTTTCTGATAGCTGAAAGACAATCCATTATCCGTTAGT
GTCCATTATTCATTAATCTGCACAATGCATACATTAGTGTAAACGGCTTA
TATAGCTGCAATGAGGAAAAAAATTGTTAAAAGCTTCGAATGTCGTTTCT
CGGCTCTTTTCAATAGGATGACGTAGACTTAACTTGAGGCATATCAAGTG
TGAAATTTTCTTCAAACATAATTTTTCTTTAGGTTGGGGAGAAGTGGTAC
CATACTCAGATACCGGCAAAATAGTAACCATGATAATCACGCTACCCTTT
ATCGCAATATCCATGCCTGTTTACATTTACACGGGAGAGATGATCACGTC
CGTAACACGTATCGCCGTAGTCATCATACGCCGTAAATTTCAACGTAATT
TTTCACAGAAATATTTAACACTGGAAACTCTCGTATCGCAAATGTTTATG
ACGATTGTCGTATGGTTATCTTTAGCCGCCATCGATTATTCAATATACGT
AGATGAAAATAAACGATTTTTCGATTCAATGTATTATTCAATGATGACTA
TATCGACAGTGGGATTCGGTGATTTTTATTGGAGTAGCGAAGATTGTTTT
AATAAAGGATTTCACTATCTGTTGTTATCCAGTTTTTGTTTCTTATTTTC
AATGGGAACTTTTGCGTCCACTTTAACACAAGTAAATAAACTGATATGTG
ACTTGACAACTAAGAAACCGAATTTCTTACGGAAAGTACGAAAAATGACT
GAAGGAAGAACACGCAATGAAGGAACGATAAATTCGCCAGATAATGAAGG
AACGAAAAATTCGCCGAAAATCTTGCGAGAAATGAATAATGCATACATAA
ACCATATTTATTGATACACGCCTTTTTTTATAAGAACCACTAAAGTTTGG
CTGATGTCTTATTTATCTTTTAATTTTCATTTTCTTAATACTCTAATTCT
CCTTATTAAAAT Coding sequence (CDS) from alignment at sc0000122_pilon:240533..242994- >MSTRG.14567.1.p1 ID=MSTRG.14567.1.p1|Name=MSTRG.14567.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2058bp|location=Sequence derived from alignment at sc0000122_pilon:240533..242994- (Clytia hemisphaerica_ch_hm2_pilon)
GTTGGGGAGAAGTGGTACCATACTCAGATACCGGCAAAATAGTAACCATG
ATAATCACGCTACCCTTTATCGCAATATCCATGCCTGTTTACATTTACAC
GGGAGAGATGATCACGTCCGTAACACGTATCGCCGTAGTCATCATACGCC
GTAAATTTCAACGTAATTTTTCACAGAAATATTTAACACTGGAAACTCTC
GTATCGCAAATGTTTATGACGATTGTCGTATGGTTATCTTTAGCCGCCAT
CGATTATTCAATATACGTAGATGAAAATAAACGATTTTTCGATTCAATGT
ATTATTCAATGATGACTATATCGACAGTGGGATTCGGTGATTTTTATTGG
AGTAGCGAAGATTGTTTTAATAAAGGATTTCACTATCTGTTGTTATCCAG
TTTTTGTTTCTTATTTTCAATGGGAACTTTTGCGTCCACTTTAACACAAG
TAAATAAACTGATATGTGACTTGACAACTAAGAAACCGAATTTCTTACGG
AAAGTACGAAAAATGACTGAAGGAAGAACACGCAATGAAGGAACGATAAA
TTCGCCAGATAATGAAGGAACGAAAAATTCGCCGAAAATCTTGCGAGAAA
TGAATAATGCATACATAAACCATATTTATTGAATGAGAACAACAAGTCAT
AAACAATACAAACCAAAGAGTCAAGAAGATGACGAAACACGCCACGAAAT
CAAAATCCAAATCAAAAACTTAAAAAAAAGTTTCAAGATGTTCGTCATAT
ATTTCATAGTGGTTCTATCAATCTACATTGTTCTAGTGTTCTTATTTTTC
TACATAGAACATTGTTATGATCCAGTCATACCAACCAAAACACCAAAACA
CAAACTCTGGCAACTTTGCCAACATCTTGAGAAGAATCTGACAATGGATA
TTCACAATGATACAGTGTTATCACCATTGTGTAAGAATCACAGAGAACCT
TATCGTATAAGTTGCCAGCTGACGACAACGAATTTCTTCAAATATTTTGA
TTACGTTGCAAGTATATCGTTCACCTTAGGTTGGGGAGAAGTGGTACCAT
ACTCAGATACCGGCAAAATAGTAACCATGATAATCACGCTACCCTTTATC
GCAATATCCATGCCTGTTTACATTTACACGGGAGAGATGATCACGTCCGT
AACACGTATCGCCGTAGTCATCATACGCCGTAAATTTCAACGTAATTTTT
CACAGAAATATTTAACACTGGAAACTCTCGTATCGCAAATGTTTATGACG
ATTGTCGTATGGTTATCTTTAGCCGCCATCGATTATTCAATATACGTAGA
TGAAAATAAACGATTTTTCGATTCAATGTATTATTCAATGATGACTATAT
CGACAGTGGGATTCGGTGATTTTTATTGGAGTAGCGAAGATTGTTTTAAT
AAAGGATTTCACTATCTGTTGTTATCCAGTTTTTGTTTCTTATTTTCAAT
GGGAACTTTTGCGTCCACTTTAACACAAGTAAATAAACTGATATGTGACT
TGACAACTAAGAAACCGAATTTCTTACGGAAAGTACGAAAAATGACTGAA
GGAAGAACACGCAATGAAGGAACGATAAATTCGCCAGATAATGAAGGAAC
GAAAAATTCGCCGAAAATCTTGCGAGAAATGAATAATGCATACATAAACC
ATATTTATTGAATGAGAACAACAAGTCATAAACAATACAAACCAAAGAGT
CAAGAAGATGACGAAACACGCCACGAAATCAAAATCCAAATCAAAAACTT
AAAAAAAAGTTTCAAGATGTTCGTCATATATTTCATAGTGGTTCTATCAA
TCTACATTGTTCTAGTGTTCTTATTTTTCTACATAGAACATTGTTATGAT
CCAGTCATACCAACCAAAACACCAAAACACAAACTCTGGCAACTTTGCCA
ACATCTTGAGAAGAATCTGACAATGGATATTCACAATGATACAGTGTTAT
CACCATTGTGTAAGAATCACAGAGAACCTTATCGTATAAGTTGCCAGCTG
ACGACAACGAATTTCTTCAAATATTTTGATTACGTTGCAAGTATATCGTT
CACCTTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000122_pilon | genome | sc0000122_pilon:240533..242994 - |
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