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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000122_pilon:2929..6551- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14553.1.p1 ID=MSTRG.14553.1.p1|Name=MSTRG.14553.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3623bp|location=Sequence derived from alignment at sc0000122_pilon:2929..6551- (Clytia hemisphaerica_ch_hm2_pilon)
AAGCTCTATCAATCATTTTACCTAAACAATTCAAATAAATAAAATTACGA
CGGAATATTGTCGGATTTTTCATAGCAATTTTGAAATACAGGCGGCAACG
AAGCTCGCTTCAAAGAGACAATAAAAGATAGATGTCCAGTCGTTTATATG
TTCATGATATTACATATTACATGAGGATAAAAGAGAACGAAAAAAACGTG
CGTTATAAAAGTTTCCTAGAAACATATCATTAGTACGGCAAATTGGTTTT
GATTGCGGTCACAATAAAAGAATTACAAAAATGATTTAGGTTACGAATAT
AGCAATCTAATTTGACTCTTGATGTTTTGTCTCTATTAGAATATTATCTA
CAAGAAGAAACTTTGTCAAAAAATTTGTTTTATCGAGTCTGATCCTGTCC
TTTTGAAAATCTGATGGTATCTTTCGTGTGTTAAAATATCAATAGTAGTT
TGTGTGTATGAAGCTGTATATGGTATATCGCAAATGAAATAGAGAAAAAA
AGTGGTGTGCTGATTCAAGAAATCAAAAAAATGTCTTGCCAGTCAACTGC
GACCTCTAATACCACTGTATTGGTATTCAACTTTTTTATACCAACGTTGA
TCATAATTTTCATGCAGATTTACTCTCGACTTAAAAAAGGTAAATTGACA
GCACAAGCACCATTCCTGTTCCTGCAAGACAATGACCGAAATCGATTGAT
GACGTCATTAGTGTTTGGTCATCTGTCGCTTCAGATTGCAGACATTATCG
GAGATACTGGTACAACTGTTGGACTTACACTTTGTTCAAGCTTGTCAGGT
CAACCAGAATATTATCTTTGTTCATTTCTCTCAAGGATCCTGATAGCAAC
TTTGATTGGGTTTGTATCTTTCCCGCTTTTTGCGTTGATTTCATCTCCGC
ATATACTTGTTTCATCGGCTGTTGGAATCGGATACACTGTATGGGAGATT
ATCTTTCTTGGACTACAGTTAGATTTTAACGATGCCTGTGCATCGAAAAC
TGCATTACAACAGAATATTGCAATAGCTGTGGTACCAAGTTTCATCTTTC
TCACTGCCATCTTGTTTGGTTTCGGATATCGCTTATATACGTGCTTCAAA
ACAGGTTGTCACGAACTCCCAACAAACGAAAAAAGCGTCGTTGATAAACA
TCAAATTCTGTATTTGCAAAATCTTTTGCAACAGACAAACGAACAGTCGC
AGCTAACTCATTTTCAAAAATTGAAATATGTTTTCAAACCGTGGTTTAAA
TTTCCTGGTGAAATTCTTCAATGTATGGCTGTGATTTTCGTCTTGCTGTA
TTTCACTTTGTTTATAATACAGTCCCTAATTTTACAGTTATTTAAAAGTA
ATTCTAACAAACACATCGAAATAGCCTGGTATTTAGGGTTGGTAATCAGT
ATTGTCTTGTACCTAGCCATGGTGGTTCATTTCTTGTACTGTTACCAAAA
TGATACTCTGGCAATATACACGGGAAAACACAACCTTTACCAGAAAGATG
ATGGTTGCCATAATATCGCTTTGTACCATCGATTGGTGTTTCCAGCTTAC
CTAATCAGTGCAATGCTCATTGGTTTTCTATGTTGTTTGGTGATAGTTGG
CATCGTTGTTGGGATTATTTATATCCTAGCAGCTATAGCAACAGGAACAC
TAGTCTTGATATTTCTTCGCTACATATTATCTCTCATTGGCACTGGTATC
GTTTTTAAAATCATCCAACGCTTAAGCATCCGATATTATTTCTCCGATTT
GCAATTATCAAAGATGCAAATTAATCTGAAGCATCCACGTTTATTTTATG
TCCTTTCCTTCTTTTTATTCTTCGTGAATGTGTTCACGGGTCTGATGTCC
CTGGTCAAACGTCTCTTCTTCATCATTTTCAGTTTGCTGTTATTTTATGG
TCGCATTGATCGTAACCCAATAATGTTTTTCAAGAGTATGGATATATCGA
ATTCGTACAGCTCCTTTTTACGTGTGGAGAACGTCTTCAAGAACCCAATT
ATGCGTTGCTTCTGTCAATTCCTCATGGAACCTCACATTCGAAATATATC
ACAGCTCACGTCTCAAAAGCTCACCAGAAATGTGTGGGGAAGCCCTTTGA
CTCGTGGATCCGACTGTTCGTTTCAACCAATAGCTGCGTCGGTAAAGAGC
GGTAAAATAGCCCGAAACCGTTGGTACGTTGCATACACGTTGCTACGCAA
CCCAGAATTGATCAATGATCGGTGTCAAGGCAGTTGTCAAGATAAAAGTA
ATATATCCTCGAAAATTGGAAGCATTAATGCTTGAAAGTAACATTCGAAA
ATCAACATGAACTGTGATTACTTTCTGTGTTTATTGACAACAAGAGAAAA
TGGAAAATTCCACAAAATGGAATTAGTTGGAGTTAGTTTTTCTAATGTTT
CCAGCTCACCCAAATGGGATGAGCTGGAGTTTTTACAAGATACTTCACTA
GTTGGTCATTTAAAGTGATAGAGATGACGCGTTCTTTAGAAAAAGTAATA
AGATTCTTTTATTACATCTTAACAACCAACCAAATCAAATAAGAGCTTGT
AAAAACTCCAGCTTGTCCCACCCAAATAGAGATGCGTAATTTATCGTTCT
TTAAACCGCTAGTTGTTTTAAATAGCGTAAAGTACAAAAAGGAATGAATA
TGTAGGTGTGGAAGTCGGGGTTTGGGACGGCGAAATATATCGCTATTTGA
TAGTTAGGGTTAGGATTAGGGTTAGGGTTTGCCGTTCTTTTTGTCGTATT
TTAATAGTTATTTGTCGTTCTTTTTAGAAGGTCTGGAAACGTTAGATGAA
CAGTCTCATAGTTGAGATGAGATCTACACGTCTTTTATAAGAACATCCAG
AACTTTTGTGAAGCCTTTGGATGTTCTGAGATTTCTGAGTTTTAAGCCCT
AATAATGTTTATAAACTGTTTATTGTTCTTATTTTCATCATTTTGTGAGT
ATTTTTGTGTTTCCTAGACTGGAGTCGTTTATAATGCGTGTAATACTAAT
AATACTAATACTACTAATAATACGGGATTTAGTTTGTATAAACGACTGGA
AGAATCCAGTGTTCCAGCCTTTTAAATACCCCGGCTAGCTACGCAGAAAC
TTGCGCAGCGAGAAAACAATTTATCAAGCAATAACAAACTCTCACAACAA
AATCAACTCAAAATGAAAAAACTTTTAACACACAAATCCACACACATTTT
TTTTTCAAGAATTTTTTTGAGTGGGTAAAAATTATAATTGTATTATTGAC
ACTTTTCTTTTGTTTGGAGTTAGTGCACAAAGGTTTCTAGACGACTAAAA
TTGCTCCCTCCATTACTTTTTGCTTTATTTCTATTATGTCTGAATTAGTC
GTCTAGCTTGCTAGACTATGTGTTTCCCGAAAAGAATTGGTGTTGAGAGT
TTGTAAAAAAGCCGTAAATGTTTTCTTAATATTTTGGCCATTGAAGCCTT
ATGTTCTAATGTGCTTATATAGTTTGCTCTTATATAAAAAATGATAAAAA
CTATATGATAAAAATGAATCTATTTTTATTCCTCTGGCGCTTCTTTGTCA
CGTGATACTTAGTATAAGGGCGGAAAGAATATCATATACACATACCTCAA
AGCAAAATATTTGGCATTTTTGT Coding sequence (CDS) from alignment at sc0000122_pilon:2929..6551- >MSTRG.14553.1.p1 ID=MSTRG.14553.1.p1|Name=MSTRG.14553.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1755bp|location=Sequence derived from alignment at sc0000122_pilon:2929..6551- (Clytia hemisphaerica_ch_hm2_pilon)
ATGTCTTGCCAGTCAACTGCGACCTCTAATACCACTGTATTGGTATTCAA
CTTTTTTATACCAACGTTGATCATAATTTTCATGCAGATTTACTCTCGAC
TTAAAAAAGGTAAATTGACAGCACAAGCACCATTCCTGTTCCTGCAAGAC
AATGACCGAAATCGATTGATGACGTCATTAGTGTTTGGTCATCTGTCGCT
TCAGATTGCAGACATTATCGGAGATACTGGTACAACTGTTGGACTTACAC
TTTGTTCAAGCTTGTCAGGTCAACCAGAATATTATCTTTGTTCATTTCTC
TCAAGGATCCTGATAGCAACTTTGATTGGGTTTGTATCTTTCCCGCTTTT
TGCGTTGATTTCATCTCCGCATATACTTGTTTCATCGGCTGTTGGAATCG
GATACACTGTATGGGAGATTATCTTTCTTGGACTACAGTTAGATTTTAAC
GATGCCTGTGCATCGAAAACTGCATTACAACAGAATATTGCAATAGCTGT
GGTACCAAGTTTCATCTTTCTCACTGCCATCTTGTTTGGTTTCGGATATC
GCTTATATACGTGCTTCAAAACAGGTTGTCACGAACTCCCAACAAACGAA
AAAAGCGTCGTTGATAAACATCAAATTCTGTATTTGCAAAATCTTTTGCA
ACAGACAAACGAACAGTCGCAGCTAACTCATTTTCAAAAATTGAAATATG
TTTTCAAACCGTGGTTTAAATTTCCTGGTGAAATTCTTCAATGTATGGCT
GTGATTTTCGTCTTGCTGTATTTCACTTTGTTTATAATACAGTCCCTAAT
TTTACAGTTATTTAAAAGTAATTCTAACAAACACATCGAAATAGCCTGGT
ATTTAGGGTTGGTAATCAGTATTGTCTTGTACCTAGCCATGGTGGTTCAT
TTCTTGTACTGTTACCAAAATGATACTCTGGCAATATACACGGGAAAACA
CAACCTTTACCAGAAAGATGATGGTTGCCATAATATCGCTTTGTACCATC
GATTGGTGTTTCCAGCTTACCTAATCAGTGCAATGCTCATTGGTTTTCTA
TGTTGTTTGGTGATAGTTGGCATCGTTGTTGGGATTATTTATATCCTAGC
AGCTATAGCAACAGGAACACTAGTCTTGATATTTCTTCGCTACATATTAT
CTCTCATTGGCACTGGTATCGTTTTTAAAATCATCCAACGCTTAAGCATC
CGATATTATTTCTCCGATTTGCAATTATCAAAGATGCAAATTAATCTGAA
GCATCCACGTTTATTTTATGTCCTTTCCTTCTTTTTATTCTTCGTGAATG
TGTTCACGGGTCTGATGTCCCTGGTCAAACGTCTCTTCTTCATCATTTTC
AGTTTGCTGTTATTTTATGGTCGCATTGATCGTAACCCAATAATGTTTTT
CAAGAGTATGGATATATCGAATTCGTACAGCTCCTTTTTACGTGTGGAGA
ACGTCTTCAAGAACCCAATTATGCGTTGCTTCTGTCAATTCCTCATGGAA
CCTCACATTCGAAATATATCACAGCTCACGTCTCAAAAGCTCACCAGAAA
TGTGTGGGGAAGCCCTTTGACTCGTGGATCCGACTGTTCGTTTCAACCAA
TAGCTGCGTCGGTAAAGAGCGGTAAAATAGCCCGAAACCGTTGGTACGTT
GCATACACGTTGCTACGCAACCCAGAATTGATCAATGATCGGTGTCAAGG
CAGTTGTCAAGATAAAAGTAATATATCCTCGAAAATTGGAAGCATTAATG
CTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000122_pilon | genome | sc0000122_pilon:2929..6551 - |
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