MSTRG.14528.1.p2 (mRNA) -

Overview
NameMSTRG.14528.1.p2
Unique NameMSTRG.14528.1.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000121_pilon:700639..703513-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14528.1.p2 ID=MSTRG.14528.1.p2|Name=MSTRG.14528.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2875bp|location=Sequence derived from alignment at sc0000121_pilon:700639..703513- (Clytia hemisphaerica_ch_hm2_pilon)
GCAACAATTTTGTTAGCAATACCTGGATTTGTTTTGTTATGGGTGTTAAT CACTTATGTGGAACATTTGATCAGTTTGAGGAAATACCCAAAAGGACCAT TCCCTTTACCTCTGATCGGAAACATTTTGCTGTTGAGTAAAAAACCTCAT TTGAGTTTCATTGAACTTGGCAAAAAATATGGCGATGTGTTCAGCTTGAG CATGGGTAAGGAACCTTCTTTTCTCCCACTCAAGCCCCCCCCCCCACTTC GATTGAAAATTTTGACCAGTGATGTAAGAAAATAAACCACATTAATATCG GTTCGAGCATCTCTTTGACGGAACATCAAGAAAGGAGGTCTGAAGATCCA AATGAGAATTTGAAATGAAAATGTCTCCAATTTAAGCAAAATGACTATAA TAAAACTGATCTTCGTCTAAGAAAATAATCATGTCTTGATTTTGGTACTC CCCCTGTTTTGAGGGGCGGTTAACCGGTTTAAAGGCTTACATGATGATAA TGATGAACATTAAAGTCTTATTCAATTCATCTCAATAGGAAAGCAGCTGT TCAAGGAACTGAAATTGTTCATTTGTTGTTTTTCAGGCATGAAAAGAGTT GTCGTTGTTAACTCGTACCACGGTATAAAAGAAGCACTGGTGACAAGAAG TAACGATTTCGCCGGTCGCCCAATCAGCGGTAATATACACGTCCAAATGA TCACAAATAATGGTAAAGGTTTGACGTCTTCTGATTATTCCAAAAAGTGG TCATTGCTGAGGAAAGTCACATACAAGAGTTTACACTTATACGGGTCAGG AATGAAAAATATCGAAGAAATCGTAATCGATGAAGTCGAGAAAATGTGTT CGTTGCTTTCCAAAGAGATTGGACGTCCGACCATCATTGATCAATATATA GGTAATCTTTTACGTTCAAGTTAAAAGAAAGAGACTTTGGTCTATAATTT ACAACTTTAAGTTTATGCCGCACGTATGGAGGACAATCAACAGCTAACAA GCTAACAGCTTAAAACAAGCTTTGATGTCATTGAGCACTCTCGGAAGATA GAAGAAAATAGATTTATAGGTAATCTTTACTGAGTATCCATAAGGCTGAA ATCAATTTTTTTAACAATGGCCTTTTTGACCTCCTTCTTGACCCTTAAAG TTACCGATAAGTCGAGATATTCAAAAGTCTCTCTGAAAAACTTCTCCAGC TATATCACAATGAAAAAGAAAGAAAGACATTTTCTAAGAACAGTTTGAGA GCACTTGAAGCCTGACAATTAGGTAGAGCCTTGTAACAAAACATCTTATT CATGATATGCACCATTGCAACGTCTTCTGACATTACATTACGGACCCAAG AGCTGATTGGGTCCGGCGTGTAAGTGACGTAAAATTGATCAATACGTCAC TTTCAACCAATCAGCTGTTGGGTCCGTGGAAGACATTGCAATGGTGCATA TCATCAATAACCTGTTGATTCTTATTTCAGGAGGCTCACTCATCAGTACC ATTCACTACATTTGCTTCAACAAGAAATACCACACAAATGATGACGAGTT CCTACACATATTAAAGTACATGAAATTAATAAGCAATGGCTTAGCTCCTG GATAGCTAATCTCTATCTTCCCCTGGCTCCGTTTTTTTCCGGACACTCAA CGATTCCGAAAGTTCAAAGAAGGAATTACACTTCGACGTGCTTTCATGCA TAAAATGTTCGAGGAACATATTGCGTCTTTTAACCCGGAGAAGATTAGAG ATGTGACAGATAATCTTATCGCCTTCTCGCAAAACAAACAGCTACTGGAG AGTGTGGAAATACAAGATTGGACGCAGAAAGATATTCTCGAAGCTGTTAT ACCTTCGTTGTTTTTCGCAGCAGTAGAAACCTCCCTTACCACCATTCGAT GGTGCCTGATTTACTTGATACGAAACCCACATGTTCAGACAAAGATATAT GAAGAAATTTTACAGAATGTCGGACTGAAACGTCAGACTGAAGCTGCAGA TGTTGATTCTCTACCTTTTGTTCAAGCAGTCATGTTAGAAACAAATCGTC GAGCGTCCATTCTACCTATCAATGTCCCTCATAAAACCTTAGTAGATACA TCGGTTGTTGGCAAAACAGTTCCTAAAGACACACGAGTGTTCTTCAATCT ATACAGCATGCATCACGATCCTACACACTGGGATGAACCAGGGAAATTCA AACCAGAACGTTGGTTGAATGCTGATGGAAGTTTGAAGAAAGAAAAGGCG ACACACTATCTTCCTTTTGGAGCTGGTATTCGTGTTTGTCTTGGAGAGAG AATGGCAAAAATGCAAATGTTTTTGATTGTCACACGGTTATTGACGAATT TTGAAATTTCACTTGCTCCAGGAGAAACCTTACCTGGCTCCGAGGATGGC GTTCTTGGAATCACACTTCAACCACCACCCTTTAAAATGATTCTGAATAC CAGAAAGATTGAATGATACATAACTCAATTTATATATCTCACTTTTCAAT GTACTGTAAACTCTGATACAAAGATAATTTTGCATCAATTTTGATTTCGT CAGTTTGTCAATTTTATTTTTCTAAATGAATTTATACAAAAATAAAACGG TAATTTTGTAATCATTGGATTGAGCTCAACATGTTCTTATTAGTTCAGGA GATGAAGCAGCGCTGTCAAATTCTACGAGAAATTTAACTTTTCAGGGCTT TCGGAAATGTTGGATGTCAAATTCGACAGCGCTGCGGTCTTCTGCAACAT CCCACTTTATCTTATTGATCCCACCATGTTATTAATTTATGAAATATGAG GCTAAGATTGTTCTTAGTTTGTTTTAATGTTTGTATTCTTGCAATTGTTT TCTAATAAATTTTAAGGTTTTGTCG

Coding sequence (CDS) from alignment at sc0000121_pilon:700639..703513-

>MSTRG.14528.1.p2 ID=MSTRG.14528.1.p2|Name=MSTRG.14528.1.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1935bp|location=Sequence derived from alignment at sc0000121_pilon:700639..703513- (Clytia hemisphaerica_ch_hm2_pilon)
GAGGCTCACTCATCAGTACCATTCACTACATTTGCTTCAACAAGAAATAC
CACACAAATGATGACGAGTTCCTACACATATTAAAGTACATGAAATTAAT
AAGCAATGGCTTAGCTCCTGGATAGGCATGAAAAGAGTTGTCGTTGTTAA
CTCGTACCACGGTATAAAAGAAGCACTGGTGACAAGAAGTAACGATTTCG
CCGGTCGCCCAATCAGCGGTAATATACACGTCCAAATGATCACAAATAAT
GGTAAAGGTTTGACGTCTTCTGATTATTCCAAAAAGTGGTCATTGCTGAG
GAAAGTCACATACAAGAGTTTACACTTATACGGGTCAGGAATGAAAAATA
TCGAAGAAATCGTAATCGATGAAGTCGAGAAAATGTGTTCGTTGCTTTCC
AAAGAGATTGGACGTCCGACCATCATTGATCAATATATAGGCAACAATTT
TGTTAGCAATACCTGGATTTGTTTTGTTATGGGTGTTAATCACTTATGTG
GAACATTTGATCAGTTTGAGGAAATACCCAAAAGGACCATTCCCTTTACC
TCTGATCGGAAACATTTTGCTGTTGAGTAAAAAACCTCATTTGAGTTTCA
TTGAACTTGGCAAAAAATATGGCGATGTGTTCAGCTTGAGCATGGGAGGC
TCACTCATCAGTACCATTCACTACATTTGCTTCAACAAGAAATACCACAC
AAATGATGACGAGTTCCTACACATATTAAAGTACATGAAATTAATAAGCA
ATGGCTTAGCTCCTGGATAGGCATGAAAAGAGTTGTCGTTGTTAACTCGT
ACCACGGTATAAAAGAAGCACTGGTGACAAGAAGTAACGATTTCGCCGGT
CGCCCAATCAGCGGTAATATACACGTCCAAATGATCACAAATAATGGTAA
AGGTTTGACGTCTTCTGATTATTCCAAAAAGTGGTCATTGCTGAGGAAAG
TCACATACAAGAGTTTACACTTATACGGGTCAGGAATGAAAAATATCGAA
GAAATCGTAATCGATGAAGTCGAGAAAATGTGTTCGTTGCTTTCCAAAGA
GATTGGACGTCCGACCATCATTGATCAATATATAGGCAACAATTTTGTTA
GCAATACCTGGATTTGTTTTGTTATGGGTGTTAATCACTTATGTGGAACA
TTTGATCAGTTTGAGGAAATACCCAAAAGGACCATTCCCTTTACCTCTGA
TCGGAAACATTTTGCTGTTGAGTAAAAAACCTCATTTGAGTTTCATTGAA
CTTGGCAAAAAATATGGCGATGTGTTCAGCTTGAGCATGGGAGGCTCACT
CATCAGTACCATTCACTACATTTGCTTCAACAAGAAATACCACACAAATG
ATGACGAGTTCCTACACATATTAAAGTACATGAAATTAATAAGCAATGGC
TTAGCTCCTGGATAGGCATGAAAAGAGTTGTCGTTGTTAACTCGTACCAC
GGTATAAAAGAAGCACTGGTGACAAGAAGTAACGATTTCGCCGGTCGCCC
AATCAGCGGTAATATACACGTCCAAATGATCACAAATAATGGTAAAGGTT
TGACGTCTTCTGATTATTCCAAAAAGTGGTCATTGCTGAGGAAAGTCACA
TACAAGAGTTTACACTTATACGGGTCAGGAATGAAAAATATCGAAGAAAT
CGTAATCGATGAAGTCGAGAAAATGTGTTCGTTGCTTTCCAAAGAGATTG
GACGTCCGACCATCATTGATCAATATATAGGCAACAATTTTGTTAGCAAT
ACCTGGATTTGTTTTGTTATGGGTGTTAATCACTTATGTGGAACATTTGA
TCAGTTTGAGGAAATACCCAAAAGGACCATTCCCTTTACCTCTGATCGGA
AACATTTTGCTGTTGAGTAAAAAACCTCATTTGAGTTTCATTGAACTTGG
CAAAAAATATGGCGATGTGTTCAGCTTGAGCATGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14528MSTRG.14528Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14528.1.p2.exon3MSTRG.14528.1.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14528.1.p2.exon2MSTRG.14528.1.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14528.1.p2.exon1MSTRG.14528.1.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14528.1.p2MSTRG.14528.1.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000121_pilongenomesc0000121_pilon:700639..703513 -