MSTRG.14498.3.p2 (mRNA) -

Overview
NameMSTRG.14498.3.p2
Unique NameMSTRG.14498.3.p2
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000121_pilon:207719..214603-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14498.3.p2 ID=MSTRG.14498.3.p2|Name=MSTRG.14498.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6885bp|location=Sequence derived from alignment at sc0000121_pilon:207719..214603- (Clytia hemisphaerica_ch_hm2_pilon)
AACTTTTCCAGGGAGTAATCTGAAGAAGAATTTCCAGCCAGGTAAAGGTT TTTTAAACTTTCATAGGGTAAAAGACTGATTTTAGTTCGCCCGCCTTCAC TTTAAGATATGAAAGAATAATTTTTCCAATGTTTATTTAAATTTTTTTTC CATTTCCAAGCAAGGGGTATACTTTTTTCAATTTTTTTTTGCTTGAAAAG GTTCGTGTCCACACCGCCCCCACCCATGTATGGATTTTGAATAGAACATC CCATTGGTCCTGTTATTTAACTGTTCTCAAAAAAACACTGTAAGTTGAAC GAGTTGAAAAAAAGCTTTTTTCAAAACAAATCTGATAGAAACCATCCTCA ACAGACTATGAATAAACAGCAACATATAAAAACCAGGTCTATGTTTAGTT ACAGTTGACTGATCACGTCGTTAATTGAATTAAGCTCAAGCTGTGCATTA GATTTTGTGCAGAGGTTAATATCAAAATAATCACAGATTTATATCAAAGT AATGGTAAATCTAACCTGGAGATGTAGTGGATTAGGCCCAAGAAATCACC AAAATGCAGTATTCGAAGATTTTAGCTATATCTTTTTTGGTAACAATCCT ATTATGTGGAACAGGTAATAATCTTTTGGACAACAATTAATTGTAGCTTT ATTGAAAAGAACTCAACCTGTTTGAATATCTTATTTCAAGAAAGAGGTAA CCCTGTCTCAGTTTTGGATAACGTGAAAGAGCTAAATCTTGATGGTAATG GAGAATGTTTTCTTTTTGATTAATTGGGCTTTCAAGTCTTATTACTCTTG TGTGCTTAGTAATGAGGGGGGGGGGGGGTCATTTGCTATTTTTAGGAAAC AAATCACCCCCATATCACTTTATAATTATAATGACCTTTATAATGGGGGG GGGGGGCATTTTGTGACCTTTATGCTACGAAGTGCCAAAATTTGCCAAAA ACCTTCATTTTCCTAGGGATTTTTAGCAAAATCAGGTCAATTAATCATGA CCCCGAACCCCAATTTTGTTGATTTTTATCTGCTTATTACACCCCCCCCC ACAAGAGTACAGGTCAAAAAAACAATGTACTCTTAGGTTCCAAATAAACG GAGGGGTTCGAATAAACGGGGGGGTTGGAAAATTTTCTAGATTTTAATAA ACGGGGGGGGACCTAATTGCCGGGGGGGTTGGAAATTGTACTTCTGAAAC CCAAAAATAAGGTAAAAATAGGCTAATATCAGGCTATTTAGAGCAAAATA AGGGGCCTTCTCTTTGACAGCTGAAAATATTCTTAGAGATTAATAAACGG GGGGGTCCTAATAAGGTCGGGGGGGGGGGGGGGGGGGGGAGTTGGAAAAT TTTCGAAAAATTAACAAGAGGGGGGGGCCCGTTTATTTGGAACCTAAGAG TACATTCGTAAAATTTTAGAGAAGATGATAGCTTTCCAATGGAAAAAATG CTTTTGCCATTGTAACATTTACTTTTTTTTTCAGATGCTTTTGAGACCAA AGAGAGCAGGGAGAGGAACAATAAACTTTATCAAACGCTTGCCAATGCTC AGCCAAAACATGCAACTACAAAAGATTCCATTCACTCATCAACACAAAAG AAGAACATTCAAAAAACTAAAATTCTGGAAAGTGGACTTTACAACGTATT AGCAAATATCAAAGAAGGAAAAATGAAAAGGCGGAATATGACATCTCTGT CAGCCCGCCATGCAATGATCCGCCCGACTGAACCACCTACTCGAGGTACT CGTCCAACTCGCCCAACTCGTCCTACACCTCCAACTCGACCTACACGTGC CACAAACTGCCCTTGTAACCAAAACTGTCAATCATGCGGCTGCACCTGTC ATAAGAAACAAATCAAACAAAACATTCATGCAAGAAAAACAATGCCAGGA TCGCGTAAAACAATAACGACTCCTCGTAATTTGACTGAGATATTTCGTAA AAAGTTACTAAAATCTCGTAATGAGACAGATTCTCGAAAACGGGATTTCA TGAACGAAGTTTTAGATAGTTCAGTATTTTCAACAGGGCATGCGCCAAGC CAGTGGCAAGACTTCTATGATAATGGTGCGAAATGGGACCAGTATGAAGC ACCACAGGTTCACCATGACAGAAAAATCAATTTTGAAGACCCGAATTATA AGGTATCGCTAGGTTTTACAGACGGAGGTCACGAGCTAATGGAACATGCT AATGAAATGACTAATAATCATGTTGAAGCTTATCCAGGAGAAATTGTTTC TGGTGAAAATTACCTGTCAAAATTCGTCTCCCCTGTAGAGCAAGACACGC GCAGGCCTTGTTCTCGCGGTCGTCGCAATTACGGATATGATAAAAAACGC TATCGAATCAAAGGAGAAGGTTACGACCCATGTTCACGCGAGATGACTGA GGTGACAAAAACCGACAAGGAAAACACAAGGGCTGTTTTCAATACACTAA GTGGGTTTATGACTCCCTTTAATTCGTTCGACAGTGATCAAGATGGACCA CAAAAAGGAAATCGCCGTCACGAATTCAATAGCCGAGATCGCAATCTTGA TCGGCCAGATGAAGAGAGTGAAAGCGACGAACGAAGACATCACGATGACC GAGATCGGGACGAACACGGAAGTGCCAAAATTTGCCAAAAACCTTCATTT TCCTAGGGATTTTTAGCAAAATCAGGTCAATTAATCATGACCCCGAACCC CAATTTTGTTGATTTTTATCTGCTTATTACACCCCCCCCCCCACAAGAGT ACAGGTCAAAAAAACAATGTACTCTTAGGTTCCAAATAAACGGAGGGGTT CGAATAAACGGGGGGGGGGTGGAAAATTTTCTAGATTTTAATAAACGGGG GGGGACCTAATTGCCGGGGGGGTTGGAAATTGTACTTCTGAAACCCAAAA ATAAGGTAAAAATAGGCTAATATCAGGCTATTTAGAGCAAAATAAGGGGC CTTCTCTTTGACAGCTGAAAATATTCTTAGAGATTAATAAACGGGGGGGT CCTAATAAGGTCGGGGGGGGGGGGGGGGTTGGAAAATTTTCGAAAAATTA ACAAGCGGGGGGGGGGGCCCGTTTATTTGGAACCTAAGAGTACATTCGTA AAATTTTAGAGAAGATGATAGCTTTCCAATGGAAAAAATGCTTTTGTCAT TGTAACATTTACTTTTTTTTTTCAGATGCTTTTGAGACCAAAGAGAGCAA GGAGAGGAACAATAAACTTTATCAAACGCTTGCCAATGCTCAGCCAAAAC ATGCAACTACAAAAGATCCTATTCACTCATCAACACAAAAGAAGAACATT CAAAAAACTAAAACACTGGAAAGTGGACTTTACAACGTATTAGCAAATAT CAAAGAAGGAAAAATGAAAAGGCGGAATATGACATCTCTGTCAGCCCGCC ATGCAATGATCCGCCCGACTGAACCACCTACTCGAGGTACTCGTCCAGCT CGCCCAACTCGTCCTACACCTCCAACTCGACCTACACGTGCCCACAAACT GCCCTTGTAACCAAAACTGTCAATCATGCGGCTGCACCTGTCATAAGAAA CAAATCAAACAAAACATTCATGCAAGAAAAACAATGCCAGGATCGCGTAA AACAATAACGACTCCTCGTAATTTGACTGAGATATTTCGTAAAAAGTTAC TAAAATCTCGTAATGAGACAGATTCTCGAAAAAACGGGATTTCATGAACG AAGTTTTAGATAGTTCAGTATTTTCAACAGGGCATGCGCCAAGCCAGTGG CAAGACTTCTATGATAATGGTGCGAAATGGGACCAGTATGAAGCACCACA GGTTCACCATGACAGAAAAATCAATTTTGAAGACCCGAATTATAAGGTAT CGCTAGGTTTTACAGACGGAGGTCACGAGCTAATGGAACATGCTAATGAA ATGGACTAATAATCATGTTGAAGCTTATCCAGGAGAAATTGTTTCTGGTG AAAATTACCTGTCAAAATTCGTCTCCCCTGTAGAGCAAGACACGCGCAGG CCTTGTTCTCGCGGTCGTCGCAATTACGGATATGATAAAAAACGCTATCG AATCAAAGGAGAACGTTACGACCCATGTTCACGCGAGATGACTGAGGTGA CAAAAACCGACAAGGAAAACACAAGGGCTGTTTTCAATACACTAAGTGGG TTTATGACTCCCTTTAATTCGTTCGACAGTGATCAAGATGGACCACAAAA AGGAAACCGCCGTCACGAATTCAATAGCCGAGATCGCAATCTTGATCGGC CAGATGAAGAGAGTGAAAGCGACGAACGAAGACATCACGATGACCGAGAT CGGGACGAACACGGAAGTCAAGCACCGTTTCGAGGAAACGAGCGGTTCCG TGTTCGAGGCGATAGGCATCCCGACGGCCGACATTTTCACGATGAAGAGA ACCGGGATAACGAATACGAAGATGAACGGCAAGACGCTCGGAATCGTAAT GTGAGAGTTGAGAATCGGGAACAAGATGTTGAAACGAAAAATGAAAATCA TTTTGTTGATAAACAACACTTTAATGAAGACGGTCCACGTGAAGACGAAG AAAGATATGATGAAGGGGAGAATGAACGTGAAGGTGAAGAGGGGAGAAAC TTTAGCAACGAAGGAGAGAAAATGACTAGAGAAGAAGACACGACCTCTAG ATTCTTACCTGACGAGCAAGGTACATCGAGAGACAATTTATTAGATTCAA ACGGCCGCCCAATGCGCTATGAAAAGAGTGATGGAGTGGTAGGTAAGTTT CTTCAACAAACGAAGGAGGGTGACCAGGAAAAGAGCCTCGAGGAGAAAGC GAATTCGCAGCAGGAGGAGGGTGATGAAAAGGAGAGCGCTCTCGTAGAAG AACAACATGGAGAAGTGCCAGAAACTGAAGTAGACGAAGGAGCTGCTCGA AGATCGGAGAGTGAGATTTCAAATCGAGTGAAAGGTAAGATTTTAAAATG TCTTCGTTTTCTCACGCATCATTTTTATTTTACGAAACTGGCATTCAAAA AAGCTGATAAACCCAAAAAGTAAAAAAAAATCCATGCATTGTTTTTTTGG TTTTCAAAACGTGGTCGTGAGAAGCTCGTTCTGAATTCTTCGTTTAGAAA CTAAACTTAAAAGTTACCAATGCTCTTAAAAGTTAGTTCCATAAAACATT ATATCAATACTAAATTCAATCCACCAAAGGTATGTTGAGTATGATCGAAG GCACTGATAAGATGGGTTCTCCTGAAGAGAGGAAAGCGATACAAAAAATC ATGGATGCATCGAATCGTGAGAATGAATTACTAGCTAAAAGCTTTGCAAG TAATGTTGAAAAGAAAGTTTTAAGTGGAGAACGGAGAAGTTCTGAAATCA CTGAAACTGGGAATCCACATGTTAGCACTATTTCAAACTACGAGAATAAA CTCTTAAGTCTTAAGCATGAAAATGACTTTGCAACACCTGGAAATCACCA CGAGAAAGAATTTGCAGAATTATCACCAACTGGTGGAGACAGCTCCATAA GTCAGCTCTTGGGAACTCCCATGAATGATGAGAAAATTTCACAACTTCCT GAAGGATTGACCGAGACTATGGGTAGTGCTAAGTCATTGATTACCACTAA AGTTGCTGGTTTAAGTTTTCAACGTTCTCTTCTGAAGTCTTTGGCGGATG TGACACCACCTACCAAACAAAGCACACCTGGATTATTTTCATCGTTTAAA AGTCAAACAAAAAACGATACGAGTAATTTGAAAGAACATTTGAAATTATT CATGCTCCATTTGAATGAGAAAGGCACCAAGAATCCTGATGTGGAAAAAC AATTTTTATCTCATACAGCAATTAGTTCGATTATTAACGAAGTACAAAAA GCGGACCACAACCTGCTAAATGGGAAATCTAAAATCAGGACCAAGATTTT GAACTCAAAAAACAAGCTTTGAAGAATCGAAGGGTTCTCTTAGATACTGG TAACAAATCAAGGTTACTATGTCATCAAATACTGATAATGCAAAATGGAA CACCACAGAATTCAAACACTTAACAATCATGGATTTGCATTTTGCTCGCA AAGCTGTCTTCATTTCCTGAATACCAAAAACTCCAAAACGAACATTAGAT TTCTCTAGTGGGAACAAAATTCACATAGTGAATTTGGTTTATCCAGCTTT GATATCAAGCGGATAGGATATTTAAAGTGTTTTTTTGTAATAATTAGTTG TCATTTCTTTGTTCATTTTTCATTGCAGAGTTGATGAGTGCAACCTTTGA ACCAATATCTACATTCATGAAAAAATCAAACATCGAACGAAATCCACCAA CCACTGACCATGCACGTATCATTCATTCACCAATGATCTGAATGTAACCA AACACTATACAGAATACATCTAACTCGTTTCCGAGCGCTAACGATTGTAC CAGGTCCATTAGTAAGGTGGTGCAAGTGGTAATGGGTACGGCATTTTTTG AATCCATGCATGATTTACCCGCTTTTCTGTTTTGGATAAGTGCAGCTAAT CCACCACACAGAGTTCATTCAAATCAAAATCAAAATACATGCATTCATCT GCATTCATTCGTCTATTTGTGATAAAATAAAATCATTGCACATTATTTGT TCAGGCGAATTAATATTCAGAATTCATGGACAATTCACTCCGTCTGTCCA TCTGGAATGAGATCAACCAATAACGAAATAATCCTCTCAAAATATTCATC AATCAATCAATCGTCTGACCATGAATTCAAATATACTCCACACCCACACA TTGTCATCGTACATTTCATAGCACAAAAATAAGGAATCAATAGTTTTTAT ATACTGCTCAATCAGTGCAGAGTTTATATGTTATATGGACAGTTTTTATG CATCCATGCATGTTAGAAACCTCATTATATCACCG

Coding sequence (CDS) from alignment at sc0000121_pilon:207719..214603-

>MSTRG.14498.3.p2 ID=MSTRG.14498.3.p2|Name=MSTRG.14498.3.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=750bp|location=Sequence derived from alignment at sc0000121_pilon:207719..214603- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTTTGAGACCAAAGAGAGCAAGGAGAGGAACAATAAACTTTATCAA
ACGCTTGCCAATGCTCAGCCAAAACATGCAACTACAAAAGATCCTATTCA
CTCATCAACACAAAAGAAGAACATTCAAAAAACTAAAACACTGGAAAGTG
GACTTTACAACGTATTAGCAAATATCAAAGAAGGAAAAATGAAAAGGCGG
AATATGACATCTCTGTCAGCCCGCCATGCAATGATCCGCCCGACTGAACC
ACCTACTCGAGGTACTCGTCCAGCTCGCCCAACTCGTCCTACACCTCCAA
CTCGACCTACACGTGCCCACAAACTGCCCTTGTAAACTTTTCCAGGGAGT
AATCTGAAGAAGAATTTCCAGCCAGATGCTTTTGAGACCAAAGAGAGCAA
GGAGAGGAACAATAAACTTTATCAAACGCTTGCCAATGCTCAGCCAAAAC
ATGCAACTACAAAAGATCCTATTCACTCATCAACACAAAAGAAGAACATT
CAAAAAACTAAAACACTGGAAAGTGGACTTTACAACGTATTAGCAAATAT
CAAAGAAGGAAAAATGAAAAGGCGGAATATGACATCTCTGTCAGCCCGCC
ATGCAATGATCCGCCCGACTGAACCACCTACTCGAGGTACTCGTCCAGCT
CGCCCAACTCGTCCTACACCTCCAACTCGACCTACACGTGCCCACAAACT
GCCCTTGTAAACTTTTCCAGGGAGTAATCTGAAGAAGAATTTCCAGCCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14498MSTRG.14498Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14498.3.p2MSTRG.14498.3.p2-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14498.3.p2.exon3MSTRG.14498.3.p2.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14498.3.p2.exon2MSTRG.14498.3.p2.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14498.3.p2.exon1MSTRG.14498.3.p2.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000121_pilongenomesc0000121_pilon:207719..214603 -