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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000121_pilon:174930..177699- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14493.1.p1 ID=MSTRG.14493.1.p1|Name=MSTRG.14493.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2770bp|location=Sequence derived from alignment at sc0000121_pilon:174930..177699- (Clytia hemisphaerica_ch_hm2_pilon)
TTTCACTTTGAATGTGTAAAAAATCGTCTAGATAAGAAGATTTGCTACAT
CAAACTTTTAGATAAAACTTCTCTAGAAAATATATCAGGAGCGAGAAAGT
TACCACGAAACGGTCTCCAATACCAGAGACGGAGGTTCCATTATACAGAA
ATATGGAGTTAGCGGGATTGAAAATAGTGCTGTCCTTATTGACTGCTTTT
TGGATTCAACCATGTTACGGGGTGAATATAGCAAGTCTCGAAAACATTAA
TATGACAGAATATGAAAAAGTGACGCTACCATACCTACACGACAACAACA
AGACGGTTGAAGTTAACGTATCAATGTATATTTTGAATATTGGAAATATG
AATACACGAGAAATGACATTTGAAGTTGAGATGTATTTCAGCATGAATTG
GACAGACCCGAGGCTTGCTTTTGAAGAATATCATAATGCATCTTATGCAC
TTGTGACAGGTACTTCTATTCTACTTTTTTAATTATATAGGTACCTGTCA
GGGAAAACTTCGTCGGGGAAAAGTGACGAAATTTTGGCAAGTGACGAATA
TTTTTCCCGACGATAATTTTCCCCGGCCTTAATGCGTTTACCAACTACTA
ACAAGTGGCGAATATTTTCCCCGGCGAAGTTTTCCCCGATAAAGTAACTA
ATCTTGGCAGGAATTAATTATGGCAAAACAAGTTCTCCCCAAAATAAAAG
AATAATTTATGGCTCCACTGAAATTAAATTACACCCCTGTCTCACAGCCC
CGGCGGAACTTTTTTCCTCAGTGGGGATAAAAATTCCTATAGAAATTCTA
TTGTTCCAAGATTAAAAAATCTGGTGGGGATGGTTTTGGAGTCCAATTTT
TAAACTTGGAATTTGGAGAGGGGATGAAATCAAAATCAATCTCCCAGTGG
TGCTGAAATTCAAAGGTTTTCCCGACGAAATTTTTGCTTAATTTTCCAGT
GGGGCTGGGGTCCCAACGGGTCTGTGACACAGGGGTGTTAAATTTCTTCG
TATTTTTCCAAAATAGCACATAAATATAGTTCAAAGCTCATTTCTGGCAA
AAAAAAATATCAACTATCCTACAATAATCGTGGCACGTGTGCTAAAATGT
GCGTGTACTAACAGTTAGTTAGAGATCAAGTGAGCCCAACGGAAAATACT
TAGGATGAAGCATCAGACTCATTGAGTCCTCAAAGTTTTTTTAGGTGAAA
TTGCATATGAGAATATTTGGGTACCCGATCTCTTCATTCGAAACATGAAG
TTCGTTGAAAGCAGTAAATTCCTGAAAGATCTGTCCGGAGTGATGATCTA
CCCTGATGGAGTCATTACTTTATCAAGTCGTTTGAGAGTTGTTGCACACT
GTGAAATGGATCTATTGATGTTTCCATTAGATTCTCAGAGCTGTAACTTG
ATGATAGAATCGTACCTCTATCATACCGATGTCATGAAAACTTATTGGGC
CGAAGACCCAATAGTGGTGGACAAGAGAAGAGACGGAAGAAAAACAGAAA
TCGATACTTGGATGGGTTTCACTCTAGAAGAAACTAAAACCGCGTACAAC
AGATACATATATCCACTTAATGGGCTTGAATTTCATTACATGATTGCAAC
TTTTGTTTTGAAACGGGAGCCACAATACTACATTCTAAGGGGTTTTATAC
CAAGCTCCTTACTTGTCTGTCTGACTTGGGCAAGCTTTTGGATACCAACA
ACCAGCTATCCAGCTAGAATTGGTATCGTGGTAACATCATTCTTGGCATC
TATCGTCCTTTACACTGGATCAACGCTGGATTCTCATCAGATGACAGTGA
TGCAAATGTTTTTATTTGGAAACATCGCATTTATTGGTTTAACTTTGATC
GAATTTCTGATGGCAATTAGGTCAGACAAGAAACGGAAGATGAAGCAGAA
AGTGAGTGTTCAATAATAATTTTCTAGAGCGCTGTGATAAAATGATGATT
GACTAAGCAAATATTTTATCAATAAGATCTATTTACCTCAATATGCTATA
GATTCACCTGGTTGATTCATTATTATTTATCGAAAAATGCATCGTAAAAG
GAGAAGAAATGGGGTAAACAAAACTAAAGCTAATTGTCGTCATAAACTAT
CTGTTTTATTAATTTTAGGTGATAATTGCGATTGACTTGATAAAGGAAGA
CAACCAGACGATCGAAAAAGCAGACTCAAAAACATCCGATGTTGGAAAAG
AGAAGGAAAATTTAGTGGACAAACGAGCTCGTTATATCATTCCATTTGTT
TATTTGCTTTATCTGGCAATATTTGTTGCTGTAATCATGTTTCATTGATG
CTTAAGAAAGGCAGTGTAGCTCAGGTCAAGTCAAGTCTGCAACCGTAGTC
GGAAACGACCTGAAGGCTCCTCAATTTCGGTAGCTATCTACGCGAAGGGA
GGGCGCCACTCTCTCTCTATGGATTTCTCCACTTACCCTTGATCCTTCTC
TTTTATTACTAAGCATTTAGCAGAGAGGCATCAAGTACTATTTTGGGATC
TTTGATGAGACCAAGCCAGAGATTGAAACCACGACCTTGCACACCGTTGC
CGAACAAGTTAAACAAAATTCAGCTTCATGAAAACTAGCACATTTGCAAA
AAGGGGATGTCACACGTTTTCCTGGTGGTCTAAAAGCAGGGAAATCAATA
GCATTCATGGTTCAATACCTTGTGGTAGACTTAAGTATTTAACCAACTTT
AGTTATGTTATGCCAAGTTACGTAACTTTTATGATTTATCTAAATTTGTA
TTGAATGAAACATAAAAAGC Coding sequence (CDS) from alignment at sc0000121_pilon:174930..177699- >MSTRG.14493.1.p1 ID=MSTRG.14493.1.p1|Name=MSTRG.14493.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3582bp|location=Sequence derived from alignment at sc0000121_pilon:174930..177699- (Clytia hemisphaerica_ch_hm2_pilon)
GTGATAATTGCGATTGACTTGATAAAGGAAGACAACCAGACGATCGAAAA
AGCAGACTCAAAAACATCCGATGTTGGAAAAGAGAAGGAAAATTTAGTGG
ACAAACGAGCTCGTTATATCATTCCATTTGTTTATTTGCTTTATCTGGCA
ATATTTGTTGCTGTAATCATGTTTCATTGAGTGAAATTGCATATGAGAAT
ATTTGGGTACCCGATCTCTTCATTCGAAACATGAAGTTCGTTGAAAGCAG
TAAATTCCTGAAAGATCTGTCCGGAGTGATGATCTACCCTGATGGAGTCA
TTACTTTATCAAGTCGTTTGAGAGTTGTTGCACACTGTGAAATGGATCTA
TTGATGTTTCCATTAGATTCTCAGAGCTGTAACTTGATGATAGAATCGTA
CCTCTATCATACCGATGTCATGAAAACTTATTGGGCCGAAGACCCAATAG
TGGTGGACAAGAGAAGAGACGGAAGAAAAACAGAAATCGATACTTGGATG
GGTTTCACTCTAGAAGAAACTAAAACCGCGTACAACAGATACATATATCC
ACTTAATGGGCTTGAATTTCATTACATGATTGCAACTTTTGTTTTGAAAC
GGGAGCCACAATACTACATTCTAAGGGGTTTTATACCAAGCTCCTTACTT
GTCTGTCTGACTTGGGCAAGCTTTTGGATACCAACAACCAGCTATCCAGC
TAGAATTGGTATCGTGGTAACATCATTCTTGGCATCTATCGTCCTTTACA
CTGGATCAACGCTGGATTCTCATCAGATGACAGTGATGCAAATGTTTTTA
TTTGGAAACATCGCATTTATTGGTTTAACTTTGATCGAATTTCTGATGGC
AATTAGGTCAGACAAGAAACGGAAGATGAAGCAGAAAATGGAGTTAGCGG
GATTGAAAATAGTGCTGTCCTTATTGACTGCTTTTTGGATTCAACCATGT
TACGGGGTGAATATAGCAAGTCTCGAAAACATTAATATGACAGAATATGA
AAAAGTGACGCTACCATACCTACACGACAACAACAAGACGGTTGAAGTTA
ACGTATCAATGTATATTTTGAATATTGGAAATATGAATACACGAGAAATG
ACATTTGAAGTTGAGATGTATTTCAGCATGAATTGGACAGACCCGAGGCT
TGCTTTTGAAGAATATCATAATGCATCTTATGCACTTGTGACAGGTGATA
ATTGCGATTGACTTGATAAAGGAAGACAACCAGACGATCGAAAAAGCAGA
CTCAAAAACATCCGATGTTGGAAAAGAGAAGGAAAATTTAGTGGACAAAC
GAGCTCGTTATATCATTCCATTTGTTTATTTGCTTTATCTGGCAATATTT
GTTGCTGTAATCATGTTTCATTGAGTGAAATTGCATATGAGAATATTTGG
GTACCCGATCTCTTCATTCGAAACATGAAGTTCGTTGAAAGCAGTAAATT
CCTGAAAGATCTGTCCGGAGTGATGATCTACCCTGATGGAGTCATTACTT
TATCAAGTCGTTTGAGAGTTGTTGCACACTGTGAAATGGATCTATTGATG
TTTCCATTAGATTCTCAGAGCTGTAACTTGATGATAGAATCGTACCTCTA
TCATACCGATGTCATGAAAACTTATTGGGCCGAAGACCCAATAGTGGTGG
ACAAGAGAAGAGACGGAAGAAAAACAGAAATCGATACTTGGATGGGTTTC
ACTCTAGAAGAAACTAAAACCGCGTACAACAGATACATATATCCACTTAA
TGGGCTTGAATTTCATTACATGATTGCAACTTTTGTTTTGAAACGGGAGC
CACAATACTACATTCTAAGGGGTTTTATACCAAGCTCCTTACTTGTCTGT
CTGACTTGGGCAAGCTTTTGGATACCAACAACCAGCTATCCAGCTAGAAT
TGGTATCGTGGTAACATCATTCTTGGCATCTATCGTCCTTTACACTGGAT
CAACGCTGGATTCTCATCAGATGACAGTGATGCAAATGTTTTTATTTGGA
AACATCGCATTTATTGGTTTAACTTTGATCGAATTTCTGATGGCAATTAG
GTCAGACAAGAAACGGAAGATGAAGCAGAAAATGGAGTTAGCGGGATTGA
AAATAGTGCTGTCCTTATTGACTGCTTTTTGGATTCAACCATGTTACGGG
GTGAATATAGCAAGTCTCGAAAACATTAATATGACAGAATATGAAAAAGT
GACGCTACCATACCTACACGACAACAACAAGACGGTTGAAGTTAACGTAT
CAATGTATATTTTGAATATTGGAAATATGAATACACGAGAAATGACATTT
GAAGTTGAGATGTATTTCAGCATGAATTGGACAGACCCGAGGCTTGCTTT
TGAAGAATATCATAATGCATCTTATGCACTTGTGACAGGTGATAATTGCG
ATTGACTTGATAAAGGAAGACAACCAGACGATCGAAAAAGCAGACTCAAA
AACATCCGATGTTGGAAAAGAGAAGGAAAATTTAGTGGACAAACGAGCTC
GTTATATCATTCCATTTGTTTATTTGCTTTATCTGGCAATATTTGTTGCT
GTAATCATGTTTCATTGAGTGAAATTGCATATGAGAATATTTGGGTACCC
GATCTCTTCATTCGAAACATGAAGTTCGTTGAAAGCAGTAAATTCCTGAA
AGATCTGTCCGGAGTGATGATCTACCCTGATGGAGTCATTACTTTATCAA
GTCGTTTGAGAGTTGTTGCACACTGTGAAATGGATCTATTGATGTTTCCA
TTAGATTCTCAGAGCTGTAACTTGATGATAGAATCGTACCTCTATCATAC
CGATGTCATGAAAACTTATTGGGCCGAAGACCCAATAGTGGTGGACAAGA
GAAGAGACGGAAGAAAAACAGAAATCGATACTTGGATGGGTTTCACTCTA
GAAGAAACTAAAACCGCGTACAACAGATACATATATCCACTTAATGGGCT
TGAATTTCATTACATGATTGCAACTTTTGTTTTGAAACGGGAGCCACAAT
ACTACATTCTAAGGGGTTTTATACCAAGCTCCTTACTTGTCTGTCTGACT
TGGGCAAGCTTTTGGATACCAACAACCAGCTATCCAGCTAGAATTGGTAT
CGTGGTAACATCATTCTTGGCATCTATCGTCCTTTACACTGGATCAACGC
TGGATTCTCATCAGATGACAGTGATGCAAATGTTTTTATTTGGAAACATC
GCATTTATTGGTTTAACTTTGATCGAATTTCTGATGGCAATTAGGTCAGA
CAAGAAACGGAAGATGAAGCAGAAAATGGAGTTAGCGGGATTGAAAATAG
TGCTGTCCTTATTGACTGCTTTTTGGATTCAACCATGTTACGGGGTGAAT
ATAGCAAGTCTCGAAAACATTAATATGACAGAATATGAAAAAGTGACGCT
ACCATACCTACACGACAACAACAAGACGGTTGAAGTTAACGTATCAATGT
ATATTTTGAATATTGGAAATATGAATACACGAGAAATGACATTTGAAGTT
GAGATGTATTTCAGCATGAATTGGACAGACCCGAGGCTTGCTTTTGAAGA
ATATCATAATGCATCTTATGCACTTGTGACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000121_pilon | genome | sc0000121_pilon:174930..177699 - |
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