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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000121_pilon:168109..174257- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14492.1.p1 ID=MSTRG.14492.1.p1|Name=MSTRG.14492.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=6149bp|location=Sequence derived from alignment at sc0000121_pilon:168109..174257- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTACTATCACGAACAGGCAAAGGAAAACAGGAGCCTTTTGGTTCTTGA
GGCAACAAAATGGAGATGTTAAAAATCTTATTTTGTTTAACACTATGTTG
TTTTGGAGTCATTGCTGGTGAAGTTATGGCAAGCTTGAAAAACATTAATA
TGACAAATTATGAGAAAGTGTCATTGCCATATATAGCAGAACAAAACAAG
ACAGTCGATGTTAACGTATCGATGTACATTCTAAATATTGGTAATTTGAA
TACACAAGAAATGACTTTCGAAGTTGAAATGTATTTTGGCATGAAATGGA
AAGATCCAAGATTGGCTTTCAAAGAATACAACAATGCTTCGTACGCTCTT
GTAACAGGTTAGAAAATTAATATTTATATGATTGAGAAACAATTTGAAAT
ATGTACATATTATAATCCCTTAAAAATTATAGCCAACGTATTTTAACCAA
CCCTCCTTTGAACGATCAAACTTTTAGAGTCCATAATATTAAACTACCTT
AAGAAATCCGTATCTTAGACATATAAACTCTATAAGAACATCATTAATGT
GAAAAAAGTTTTCAAAACAATTTATTTCATCAAAAGAGATGAAAGTCTAA
AGTTTATCAATGATTGACTTAAAAAATCATAAAAACAACAACAAACAAGA
CGACTCAGAGTCGAAAATTTCGCAAAGTATTTGATTATAGTGGGGGCCAC
TATGTCGCGAAAAAGCTTCTCGTGTGCAGCAGCTTGTGCAAAGGGATTTT
ATGATTGAATATTGTTCCTTAAATGTAGAAGATCAAAATTTGAGAGGTGG
GGCCGGGTAGGACCACCCGCTGCCATGTAAACTGACGTCATTGGTTACTA
TGGCAACCAAAGTAGTCAAAATTGAAAACATTTTTGTTCCATTCGAAAGA
GCATGAAAAACTGATGAAAAAAAAGATCACAACCTATATCTGAAAATGAA
TATATCATGAGATATTAAGGAAATAAGGCAAAATGACGTCATGAAACAAT
GACGTCATCGAAAAATAAAGATTTGTCAAAATTCAAAAATTTTACTTTTT
TTTGGAAAGAATACCTATGGTGAACATAAAATATTATTGCGAAAAAGTCA
GAAAATCCTTTTTAAGAAGTGTATTAGCCAAAATTGATATTTTTAAATTT
TGCCTGTAATAATGTGCTGGCTGGGCGTACTCCCAGGCTCCAACCTTCGT
CAGACAAAAATTGAAAATATCAACAAGCTGCTGCACACGGGAAAACATAG
CGGCCTCTACTATTATTCATAAATGAAATAATCATATTAAACGACTGGGG
AATACAAGGGTTGAAGAATGTCAATCGGACCTCTAACAGAGAATAAAGTT
ACCCTTACAGAGACAAGGCGAAAAAGTGACTCTTAGAGCACATTTTCAAA
AAATGTTCTAACCTTCTAGAGATTTTTTTGACTTTTCAAGTTCGTACCTT
AAATAATTCCGAGACTTGGGAAGGTTAAAAACAGAACCTTAGCATCAGCA
TATACCTGGTATATACCTATTTATGCCCAAGTACATCCCCACACCTTCAC
CATTAAAAGAATGCAATAAATAGAACGGGGCTAGAGCTATATTGTCACCC
AAATGTGAACTGTCCCAGTGTGGCCAAGTTACATTTCAATATCATACCAA
TATCTTTGACTATTTACAAAAATATTAAAATGTTTACACCTTGTAGATAA
ATCAAAAATAACTGTTTCAAGGCTCGAAAAGCAAAAATTTGGAAAATTAC
ATGAATATTTTAAATTTGATGGAAATTAATTTAAATTTTTAAGGCCAATT
TTTTTTCTGCAAAAATGTTTTACCTTTAAGCTACTGCTACTTTGTTACTG
CTGTTACTTGCCTTGCATCCATATCATTGAGACGTGGAGTTACATATTTT
TTGAGAATTTATTGATTGACTAGTAGGAAATTGATTTTGGAGCAGGTCGA
TCAAATTTGATTGACTTCTATTTCTTTTTTTGATGAATAACCAATCAATT
TGTTCCAATATTCGATAGGTAATGAAGCCCATTAGAAAATTTTGAGTATT
GATCATTAATTGGATTTGAATGATAGCATAAAATCATCAAATACCTATCA
ATTACTGTACGTTGGTCTAATGTCAACATCCCCCTTCTAAATTCAACATC
CTTCTTTAAAGATAGGAATAATTGGAAGGTCAGAATCGCTGATGGAAACT
ATTTTTCTTTGCTTAGCGATCAGAGAAGAAAATACCTTTTGTCTATATAA
GTGATCCCAGCCTTCCTTCCTATTATTCCTATCTCTAAAGAAGGGTGTCG
GAATTAGAAGAGGGATGTCGACATTAGAGCAACTTACGGTACTAGAACCT
ATCGATATCCAGTCAATTAATTTGTTATCGATAGAAAATAAATCAATTGT
TTTGAGTGGGAGTCTAGCAATGTATAAAAAAGTTTGTCTTTGAGTTATAT
ATCTGATCAATCAAAACTCAAATCCATTGTATATACAGTATTCAATCAAA
GTTGATACAGATTTTACAGTAAGATTTTGATATAGACTTCAACAACAGTC
TTGCCGTTTTCCCTCGCATCCATTTGAGTTGACCGGGTGAAGGCTCGTAC
ACTTTCCAAGTGAACCGCTGTGAGTGGGAATCCTAAACTTTGACGCCTGC
TTAGCAATCGGTTGGCAAATGATATCATACTTCAGGATGCATTGTCTCTT
ATTTTCCCCTATTTTCCACTTTCCTATCTTCTATCCTGATTTCTATCTTT
CCCAAATGCTTGTTTTCTAAGTATTTTTCTGAAATTTGCCCGTACCGGTG
AAACAGGTCTCCCACCCTGGCTCGAACCACCAAATGCAAGCAACCTTGGT
TTGCAATCCCAATGCTTAACCGCTTGCGCCAACGAGACACGACAGAAAGC
TGACATTCATAAATACTTATAGCGTGTAATTTACAGACCATAACTAAGAA
AGCTCCAAACCCTACCGGCCTTCGGCCTTATATTGTGACTCTCAAGCTCC
AACCCTAACCCTAACTGATAATAACCGAACCCCCGTCTAGGTCCGCGGAT
TGGAAGATTTCACTTGCATCCTGGAGTATGATACCGTTTGCCAACTGTAG
CAATCAAGGTAACTTTTTCCAATCGATGACTAATCGATAAATAATCGATG
GATTGGATAATGTACGTTAGCGTATTATGTGATCACTTAATAGAACTAGA
ACTAGAACTAGAACTAGGATGATATCGTTTGATTTCAATAATTGATACAT
GATAGACAGAATCGAAAATCAATATTTTTTCACGGGAAGCTCGATTGGCT
ATCAATTGTATTTGTGATCCATTTTCCACCGATTTATTCTTAAGATGTTC
GATTGATCACAATTGACAGCCAATGAGTCCAATTGATTAAAAAACTAATC
CATCTGTCTATTATCAGTTAGAATAGTCTTGATTATTGAAATCAATCTAA
ATCCAATCTATCGGTTGGTTACCAATTAGTCATCGATTGATATTGAGCCT
GGAAAATGACAATTAACACATCCATCGCACCTACTCTAGCTAGCGAAAAG
TAACTTCTCTATCACTTATAGATTGACACCCCTGCTATAAATTATTTTGT
GAAATACTTAGTAAATGATAATCTGTCTTACAACACAACTCAATCAAATA
TCAACAAATAATTCTACTTGTAAAAATGAAGATCATACCCATACCTGGTC
TGTGTTGTCTGTATTATTGCTGTTGTGTGTAGTGATGTTCAAGAGCAACT
GTAATTGTAAGATTCCTATCACTTTATTGGTGCATTACTAACTACACAAA
CATAAAATACTATGCTATTGTAAAGAAATATAAACCTCTTTAAGTACTCT
AAGAACATCAAAAACATGATAAAAACACAAAGATCTAGAGCAAGTCTGAC
AGCATGATCGAATCCGCCATTTTAAAAAAACTAGCAATGTTTACGAATGC
TTGGTTCCACCTACCTAAGCACTTGCGGAGTGGAATCATTAAATTTTATT
TTAGCGAGTGAGTTCATATTATAGAATCTTCGAGAATGTTCTAGAAGTTT
CAACTACTTTCGTTTTCTAATTTTTTTTCCGCACCGCCGCCGCCGCGAAA
GACGATCGTAATACTTTCGCTATGCGAAATTAAAAAGAGCCCTTTTTTAA
GTCAACCAGGGCAAAGCTTTAAACTATATTTTTTGATCGAATGAAACGTT
TTTAAATCTTACGACATTCTAAGATTGAAGAGTTTATCTTCGTTTTTCCA
TGTTTTAAATTTTCTCTTTTTTCATAATATTCCACTCCAAATTATCTTTT
TAACGAGCACGAAACCGGTAACTAATTCAAATTCTATAAAAGTTATTGAG
GTTTGAAAAATCACTGCATGCTAATTTGAAATAGACTAGTTGAAACCCTA
TTCTCCCTTCATTTTAGGGGAGACTGCATACGACAATATTTGGGTCCCAG
ACCTTTTTATTCGAAACATGAAACACGTCGAGAGCAGTACCTTTCTTAAA
GATTTGTCAGGAGTAATGATCTACCCTGACGGTATTGTGTCATTGTCAAG
TCGGATAAGGGTCGTTGCACACTGTGAAATGGATCTACTGATGTTTCCAT
TGGATTCTCAGAGCTGTAACTTAATGATAGAATCGTACCTCTATCATACC
GATGTCATGAAAATGTATTGGGCCGAAAACCCAGTTGTCATCGACGATAG
AAGAGACGGGAGAAAAGCTGAAATCGATACGTGGAACGGTTTTACTCTAG
AGGAAGTTAAAACCACTGAAGATAGCTATATATACCCGATCAATAAGTTA
GAGTTCAAAAACATGATAGCAACTTTTGTATTAAAGAGAGAACCACAGTA
CTACATTCTCAGAGGTTTCATCCCAAGCTCATTGTTGGTCTGTCTAACAT
GGGCAAGCTTTTGGCTACCCACATCCAGTTTCCCAGCAAGGATCACCTTG
GTCGTGACATCATTTCTAGCATCAATCGTATTATATCAAGGCTCAACCCT
ACACGCTCATCAGATGACAGTCATGCAAGTGTTTTTGTTTGGGAATATTG
CATTCATCTTACTGACACTGTTGGAGTTTCTGTTGGCAGTAACGGCTGAT
AAGAAAAGAGAAAAAGAGTTGGAACAGGTAAGTACTTTATACTCTCCAAA
TACAAACTTGATATCAGAAGTGTGAATCAGCGAAAATCACCTTCACACCA
CAAAAAGAAAATCCTAATATGGCCCACTCATCTTCCAGTCAAAAGTTGGG
ACGAGAGATGAAGTTTTTACAAGCTCTTTATTTGATTTGATTTGGTTGGT
CGTTAACCAGTAATAAAACAATTTTGTTACTTTTTCTAAAGAACGCCTCA
TTTTTAACTACAAATGACCAGTTACTAAAGTATCTTATAAAAACTTTCTC
TCATCTTCCATTTTTTTCCCCTATTCATCGATCATAAATTTCTTAAATGA
AAAGGTTCAGCATTCTCGAATTTGATTAAATTTTAAACATCCACTTATTT
TTCCAGGTCAATGCATTTATCAACGATTTGTTGAAGAGCGAGGATATTCA
AATCAAAGAAAGAGAAGAAAACACCACAATATATACCAACAACAACATTA
ACAACAATTCAAAAGAAAACGAAACTTCAGTTGATTTGAGGACAGCCATG
AAAGAGAAATCAATGCTCGATGCTGACAATGAACAAAAAGTGAATCGAGT
AGACCGCAAAGCCAGATTCTTGGTCCCTTTTGTTTATTGTATCTATGTTG
GTGTCTTTGTTGCCGTCATTCTCCAACACCGATGAAAAATAAAGGGGAAA
TCAAGATAGGAGTGAAAGGAGTTGTTTAAATTCAGAGGTTGCACAAGTTG
GACACGAAAATATAATACTTGTATGTTGTTCCAGAAAGAACTCAAATAAA
CTTTGTATCAGCAAAACGACGATGTCAAAATACACTTTTTTATGAGAACA
CGAGGCGGAAAATTAGCCAAAACCTACGAACAAATTAAGAACAATCCGAG
CATCGCATTTCAGAAAGTACTAATTTTAACAGACTTTAAACCCATTTGAA
GTTTTTAAGTAAAGAAACTATAAAGCGAGTTAAGAAAATTGTAAGAACAT
TTTAAGAGTGAAAATTTCAAAAGATTAAGAACTAAGGCTAAGGTTGAGC Coding sequence (CDS) from alignment at sc0000121_pilon:168109..174257- >MSTRG.14492.1.p1 ID=MSTRG.14492.1.p1|Name=MSTRG.14492.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3861bp|location=Sequence derived from alignment at sc0000121_pilon:168109..174257- (Clytia hemisphaerica_ch_hm2_pilon)
GTCAATGCATTTATCAACGATTTGTTGAAGAGCGAGGATATTCAAATCAA
AGAAAGAGAAGAAAACACCACAATATATACCAACAACAACATTAACAACA
ATTCAAAAGAAAACGAAACTTCAGTTGATTTGAGGACAGCCATGAAAGAG
AAATCAATGCTCGATGCTGACAATGAACAAAAAGTGAATCGAGTAGACCG
CAAAGCCAGATTCTTGGTCCCTTTTGTTTATTGTATCTATGTTGGTGTCT
TTGTTGCCGTCATTCTCCAACACCGATGAGGGAGACTGCATACGACAATA
TTTGGGTCCCAGACCTTTTTATTCGAAACATGAAACACGTCGAGAGCAGT
ACCTTTCTTAAAGATTTGTCAGGAGTAATGATCTACCCTGACGGTATTGT
GTCATTGTCAAGTCGGATAAGGGTCGTTGCACACTGTGAAATGGATCTAC
TGATGTTTCCATTGGATTCTCAGAGCTGTAACTTAATGATAGAATCGTAC
CTCTATCATACCGATGTCATGAAAATGTATTGGGCCGAAAACCCAGTTGT
CATCGACGATAGAAGAGACGGGAGAAAAGCTGAAATCGATACGTGGAACG
GTTTTACTCTAGAGGAAGTTAAAACCACTGAAGATAGCTATATATACCCG
ATCAATAAGTTAGAGTTCAAAAACATGATAGCAACTTTTGTATTAAAGAG
AGAACCACAGTACTACATTCTCAGAGGTTTCATCCCAAGCTCATTGTTGG
TCTGTCTAACATGGGCAAGCTTTTGGCTACCCACATCCAGTTTCCCAGCA
AGGATCACCTTGGTCGTGACATCATTTCTAGCATCAATCGTATTATATCA
AGGCTCAACCCTACACGCTCATCAGATGACAGTCATGCAAGTGTTTTTGT
TTGGGAATATTGCATTCATCTTACTGACACTGTTGGAGTTTCTGTTGGCA
GTAACGGCTGATAAGAAAAGAGAAAAAGAGTTGGAACAGATGGAGATGTT
AAAAATCTTATTTTGTTTAACACTATGTTGTTTTGGAGTCATTGCTGGTG
AAGTTATGGCAAGCTTGAAAAACATTAATATGACAAATTATGAGAAAGTG
TCATTGCCATATATAGCAGAACAAAACAAGACAGTCGATGTTAACGTATC
GATGTACATTCTAAATATTGGTAATTTGAATACACAAGAAATGACTTTCG
AAGTTGAAATGTATTTTGGCATGAAATGGAAAGATCCAAGATTGGCTTTC
AAAGAATACAACAATGCTTCGTACGCTCTTGTAACAGGTCAATGCATTTA
TCAACGATTTGTTGAAGAGCGAGGATATTCAAATCAAAGAAAGAGAAGAA
AACACCACAATATATACCAACAACAACATTAACAACAATTCAAAAGAAAA
CGAAACTTCAGTTGATTTGAGGACAGCCATGAAAGAGAAATCAATGCTCG
ATGCTGACAATGAACAAAAAGTGAATCGAGTAGACCGCAAAGCCAGATTC
TTGGTCCCTTTTGTTTATTGTATCTATGTTGGTGTCTTTGTTGCCGTCAT
TCTCCAACACCGATGAGGGAGACTGCATACGACAATATTTGGGTCCCAGA
CCTTTTTATTCGAAACATGAAACACGTCGAGAGCAGTACCTTTCTTAAAG
ATTTGTCAGGAGTAATGATCTACCCTGACGGTATTGTGTCATTGTCAAGT
CGGATAAGGGTCGTTGCACACTGTGAAATGGATCTACTGATGTTTCCATT
GGATTCTCAGAGCTGTAACTTAATGATAGAATCGTACCTCTATCATACCG
ATGTCATGAAAATGTATTGGGCCGAAAACCCAGTTGTCATCGACGATAGA
AGAGACGGGAGAAAAGCTGAAATCGATACGTGGAACGGTTTTACTCTAGA
GGAAGTTAAAACCACTGAAGATAGCTATATATACCCGATCAATAAGTTAG
AGTTCAAAAACATGATAGCAACTTTTGTATTAAAGAGAGAACCACAGTAC
TACATTCTCAGAGGTTTCATCCCAAGCTCATTGTTGGTCTGTCTAACATG
GGCAAGCTTTTGGCTACCCACATCCAGTTTCCCAGCAAGGATCACCTTGG
TCGTGACATCATTTCTAGCATCAATCGTATTATATCAAGGCTCAACCCTA
CACGCTCATCAGATGACAGTCATGCAAGTGTTTTTGTTTGGGAATATTGC
ATTCATCTTACTGACACTGTTGGAGTTTCTGTTGGCAGTAACGGCTGATA
AGAAAAGAGAAAAAGAGTTGGAACAGATGGAGATGTTAAAAATCTTATTT
TGTTTAACACTATGTTGTTTTGGAGTCATTGCTGGTGAAGTTATGGCAAG
CTTGAAAAACATTAATATGACAAATTATGAGAAAGTGTCATTGCCATATA
TAGCAGAACAAAACAAGACAGTCGATGTTAACGTATCGATGTACATTCTA
AATATTGGTAATTTGAATACACAAGAAATGACTTTCGAAGTTGAAATGTA
TTTTGGCATGAAATGGAAAGATCCAAGATTGGCTTTCAAAGAATACAACA
ATGCTTCGTACGCTCTTGTAACAGGTCAATGCATTTATCAACGATTTGTT
GAAGAGCGAGGATATTCAAATCAAAGAAAGAGAAGAAAACACCACAATAT
ATACCAACAACAACATTAACAACAATTCAAAAGAAAACGAAACTTCAGTT
GATTTGAGGACAGCCATGAAAGAGAAATCAATGCTCGATGCTGACAATGA
ACAAAAAGTGAATCGAGTAGACCGCAAAGCCAGATTCTTGGTCCCTTTTG
TTTATTGTATCTATGTTGGTGTCTTTGTTGCCGTCATTCTCCAACACCGA
TGAGGGAGACTGCATACGACAATATTTGGGTCCCAGACCTTTTTATTCGA
AACATGAAACACGTCGAGAGCAGTACCTTTCTTAAAGATTTGTCAGGAGT
AATGATCTACCCTGACGGTATTGTGTCATTGTCAAGTCGGATAAGGGTCG
TTGCACACTGTGAAATGGATCTACTGATGTTTCCATTGGATTCTCAGAGC
TGTAACTTAATGATAGAATCGTACCTCTATCATACCGATGTCATGAAAAT
GTATTGGGCCGAAAACCCAGTTGTCATCGACGATAGAAGAGACGGGAGAA
AAGCTGAAATCGATACGTGGAACGGTTTTACTCTAGAGGAAGTTAAAACC
ACTGAAGATAGCTATATATACCCGATCAATAAGTTAGAGTTCAAAAACAT
GATAGCAACTTTTGTATTAAAGAGAGAACCACAGTACTACATTCTCAGAG
GTTTCATCCCAAGCTCATTGTTGGTCTGTCTAACATGGGCAAGCTTTTGG
CTACCCACATCCAGTTTCCCAGCAAGGATCACCTTGGTCGTGACATCATT
TCTAGCATCAATCGTATTATATCAAGGCTCAACCCTACACGCTCATCAGA
TGACAGTCATGCAAGTGTTTTTGTTTGGGAATATTGCATTCATCTTACTG
ACACTGTTGGAGTTTCTGTTGGCAGTAACGGCTGATAAGAAAAGAGAAAA
AGAGTTGGAACAGATGGAGATGTTAAAAATCTTATTTTGTTTAACACTAT
GTTGTTTTGGAGTCATTGCTGGTGAAGTTATGGCAAGCTTGAAAAACATT
AATATGACAAATTATGAGAAAGTGTCATTGCCATATATAGCAGAACAAAA
CAAGACAGTCGATGTTAACGTATCGATGTACATTCTAAATATTGGTAATT
TGAATACACAAGAAATGACTTTCGAAGTTGAAATGTATTTTGGCATGAAA
TGGAAAGATCCAAGATTGGCTTTCAAAGAATACAACAATGCTTCGTACGC
TCTTGTAACAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000121_pilon | genome | sc0000121_pilon:168109..174257 - |
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