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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000121_pilon:156909..159264- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14490.1.p1 ID=MSTRG.14490.1.p1|Name=MSTRG.14490.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2356bp|location=Sequence derived from alignment at sc0000121_pilon:156909..159264- (Clytia hemisphaerica_ch_hm2_pilon)
CCTTCACAGTAATTTGGGGGCTCCAAATGTATTGTTGCTACGGACAACTG
GCTAGTTTGAAAAATATGAACATGACAGGTTACAGTAAGGTCTCAATACC
TTATTTAAAAAACCACAATAAAACTTTGGACGTTCTAACCTCGATCACGG
TTTTGAACATTGGTAATTTGAATACGGAAGAAATGACATTTGAAGTTGAA
GTATATTTTGATATGAAGTGGATGGACCCAAGATTGGCTTTCAAAGAATA
CCTCAACGCTTCTTATGTCCTTGTCCCAGGTTTGTTTATACTGTTCAACC
TTTTTTGTCCTAATATACAAAATTCTTTTGGTTGGTGCAGTACTTTGAAC
TAGCTGTTGAACGTTTTCGTTTCTTTTAAGCAGTATATCATTTCGCTACA
CCTAAAACTTTCTTTAAAAAGGCTGAGGGCTGAAATTTTCAGAAATCCTT
TCATATAAGATTTTTATGATTGAATCCTGGATGATGAGAGCGTTTTCAGT
TAAGAAAAAACAAATTTGAAGTATTGAGAGTGAGAATAAAGCTGGTCTTC
AAGCAGCTTCAAAATTAGCCTATACACAGTCATTTGGAAGGACAGTATCA
ACATGAAAGGCAAGAATGAATGATTGTCTTGTTGATAAAGGGATCCTAGA
ATACCAGTGGGTTCTGAAACTCGACAAACTAGCTTTTTTTAAAGAGCAAC
AAAAAATTATTACTACTAGGCACGTGCGTTTGCCAATGTGAGGCTATCAT
AGTTGAAGATTTGAAGTTACAGAGAAAGGGTCACGTCAGTGGTAATAACG
ATAATAGATAATGAAACATTCAAATCATAAAGCACTATTTTTGTTTGGTT
ACAGGGGAGACTGCATATCAGCACATATGGGTTCCCGACCTATTCATTCG
CAATATGAAATTTTCTGAAAGCAGCACATTTCTGACTGACCTATCTGGAG
TCATTATCTATCCAGATGGCTTTGTTACTTTATCAAGTCGAATGAGAGTG
GTGGCGCATTGTGAAATGGATCTACTGATGTTTCCACTAGATTCCCAGAG
CTGTAATTTGATGATTGTTTCCTTCAATTATGATACAACGGTATTGAGGT
CACTATGGGGTGAAAACCCGGTAGCAGTTGATACAATGAGAGATGGTAGA
AAGTCACAAATTGATACTTGGATGGGATTGAAGCTTGTGGAGACATTGAC
AACAGAAGGAAGTTATGTCTACCAAAACAGTGGTCTCAAATTCCAATACT
TGATTGCAACTTTTGTTTTGGAAAGACAAACCCAGTACTACATCCTCAAA
GGCTTTATTCCAAGCTCATTGTTGGTCTGTCTAACTTGGGCAAGCTTTTG
GCTACCAACAACTAGCTATCCAGCTAGAGTGGCACTTATCTTGACCTCAT
TCTTGGCGTCTATTGTGCTCTACCAAGGCTCATCCTTACATATCAATCAG
ATGACAGTCATGCAAGTGTTTTTATTGGGAAATATTGCTTTGATTGGATT
AACCCTACTTGAATACTTGCTAGCAGTAAAAAAAGAACACCAGATTGTTA
AGGTAAGAAATAAAGCTAAAATCAACATAATTCAAAAGAATCTATCTGAC
AGGGTCTATTATTTCCAGTTGTACCCAATGAAGTATAAGCCCGAAGGGTT
AGAAGCAAATCTTTAACCTTTCTCAGGCGAGAAAAAGTCAAGCCTTCAAA
AGATGCGTCGTATTTTTGATGACGGATTGAATTTAGCGATTTCTTTGTTT
TCGAGTGGTTTTTTTTTAATCTAGCGGACAATTTTACTCTTAATCAGAAA
TTTATATAAAAACCACACGGGCCGCTCAAGGCCGCGCAACTTTGGTAAAA
TTTAGTGGCTTCAAATCCTACCAAGGAGATTCGATTCTAACCCTTGGGGT
TTATACTTCGTTGGTTGTACCATCCTCATCAGATCACTGTATTATCTCAT
AACTCGTATTTTATTCTCTTAGATGAAATCAATCGTGAATCAAACGAAAG
GTGCGAAAGTAAAAGGAGTTTTAGCACACAACAAAAAGAAAATGGTCAAC
CCAGTAGATCAGAAAGCGCGGTACATCATCCCTCTTATCTACATGGTGTT
TATCGTGACTTTTGTAATTTCGGTGACAATGTTAAGTGGAAAGTAATCAT
AATATTTCACGTGATAAAGGTAACTTTGGTGGTGCCCGCTTTGTCACCAT
GCTGATTTTGATCAGAACAGCACATTGATTATAATGGGATAATCTTAATA
GCAAAATAAAAGCACTAAAATTTAAAAATAAAAATTAATTATTGCAAAGA
AAATTGTTATAAGCTTGAGTTTGAGCAACTTTGGTTATTTTCGAGTTAAC
TACTGG Coding sequence (CDS) from alignment at sc0000121_pilon:156909..159264- >MSTRG.14490.1.p1 ID=MSTRG.14490.1.p1|Name=MSTRG.14490.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3447bp|location=Sequence derived from alignment at sc0000121_pilon:156909..159264- (Clytia hemisphaerica_ch_hm2_pilon)
ATGAAATCAATCGTGAATCAAACGAAAGGTGCGAAAGTAAAAGGAGTTTT
AGCACACAACAAAAAGAAAATGGTCAACCCAGTAGATCAGAAAGCGCGGT
ACATCATCCCTCTTATCTACATGGTGTTTATCGTGACTTTTGTAATTTCG
GTGACAATGTTAAGTGGAAAGTAAGGGAGACTGCATATCAGCACATATGG
GTTCCCGACCTATTCATTCGCAATATGAAATTTTCTGAAAGCAGCACATT
TCTGACTGACCTATCTGGAGTCATTATCTATCCAGATGGCTTTGTTACTT
TATCAAGTCGAATGAGAGTGGTGGCGCATTGTGAAATGGATCTACTGATG
TTTCCACTAGATTCCCAGAGCTGTAATTTGATGATTGTTTCCTTCAATTA
TGATACAACGGTATTGAGGTCACTATGGGGTGAAAACCCGGTAGCAGTTG
ATACAATGAGAGATGGTAGAAAGTCACAAATTGATACTTGGATGGGATTG
AAGCTTGTGGAGACATTGACAACAGAAGGAAGTTATGTCTACCAAAACAG
TGGTCTCAAATTCCAATACTTGATTGCAACTTTTGTTTTGGAAAGACAAA
CCCAGTACTACATCCTCAAAGGCTTTATTCCAAGCTCATTGTTGGTCTGT
CTAACTTGGGCAAGCTTTTGGCTACCAACAACTAGCTATCCAGCTAGAGT
GGCACTTATCTTGACCTCATTCTTGGCGTCTATTGTGCTCTACCAAGGCT
CATCCTTACATATCAATCAGATGACAGTCATGCAAGTGTTTTTATTGGGA
AATATTGCTTTGATTGGATTAACCCTACTTGAATACTTGCTAGCAGTAAA
AAAAGAACACCAGATTGTTAAGTTCACAGTAATTTGGGGGCTCCAAATGT
ATTGTTGCTACGGACAACTGGCTAGTTTGAAAAATATGAACATGACAGGT
TACAGTAAGGTCTCAATACCTTATTTAAAAAACCACAATAAAACTTTGGA
CGTTCTAACCTCGATCACGGTTTTGAACATTGGTAATTTGAATACGGAAG
AAATGACATTTGAAGTTGAAGTATATTTTGATATGAAGTGGATGGACCCA
AGATTGGCTTTCAAAGAATACCTCAACGCTTCTTATGTCCTTGTCCCAGA
TGAAATCAATCGTGAATCAAACGAAAGGTGCGAAAGTAAAAGGAGTTTTA
GCACACAACAAAAAGAAAATGGTCAACCCAGTAGATCAGAAAGCGCGGTA
CATCATCCCTCTTATCTACATGGTGTTTATCGTGACTTTTGTAATTTCGG
TGACAATGTTAAGTGGAAAGTAAGGGAGACTGCATATCAGCACATATGGG
TTCCCGACCTATTCATTCGCAATATGAAATTTTCTGAAAGCAGCACATTT
CTGACTGACCTATCTGGAGTCATTATCTATCCAGATGGCTTTGTTACTTT
ATCAAGTCGAATGAGAGTGGTGGCGCATTGTGAAATGGATCTACTGATGT
TTCCACTAGATTCCCAGAGCTGTAATTTGATGATTGTTTCCTTCAATTAT
GATACAACGGTATTGAGGTCACTATGGGGTGAAAACCCGGTAGCAGTTGA
TACAATGAGAGATGGTAGAAAGTCACAAATTGATACTTGGATGGGATTGA
AGCTTGTGGAGACATTGACAACAGAAGGAAGTTATGTCTACCAAAACAGT
GGTCTCAAATTCCAATACTTGATTGCAACTTTTGTTTTGGAAAGACAAAC
CCAGTACTACATCCTCAAAGGCTTTATTCCAAGCTCATTGTTGGTCTGTC
TAACTTGGGCAAGCTTTTGGCTACCAACAACTAGCTATCCAGCTAGAGTG
GCACTTATCTTGACCTCATTCTTGGCGTCTATTGTGCTCTACCAAGGCTC
ATCCTTACATATCAATCAGATGACAGTCATGCAAGTGTTTTTATTGGGAA
ATATTGCTTTGATTGGATTAACCCTACTTGAATACTTGCTAGCAGTAAAA
AAAGAACACCAGATTGTTAAGTTCACAGTAATTTGGGGGCTCCAAATGTA
TTGTTGCTACGGACAACTGGCTAGTTTGAAAAATATGAACATGACAGGTT
ACAGTAAGGTCTCAATACCTTATTTAAAAAACCACAATAAAACTTTGGAC
GTTCTAACCTCGATCACGGTTTTGAACATTGGTAATTTGAATACGGAAGA
AATGACATTTGAAGTTGAAGTATATTTTGATATGAAGTGGATGGACCCAA
GATTGGCTTTCAAAGAATACCTCAACGCTTCTTATGTCCTTGTCCCAGAT
GAAATCAATCGTGAATCAAACGAAAGGTGCGAAAGTAAAAGGAGTTTTAG
CACACAACAAAAAGAAAATGGTCAACCCAGTAGATCAGAAAGCGCGGTAC
ATCATCCCTCTTATCTACATGGTGTTTATCGTGACTTTTGTAATTTCGGT
GACAATGTTAAGTGGAAAGTAAGGGAGACTGCATATCAGCACATATGGGT
TCCCGACCTATTCATTCGCAATATGAAATTTTCTGAAAGCAGCACATTTC
TGACTGACCTATCTGGAGTCATTATCTATCCAGATGGCTTTGTTACTTTA
TCAAGTCGAATGAGAGTGGTGGCGCATTGTGAAATGGATCTACTGATGTT
TCCACTAGATTCCCAGAGCTGTAATTTGATGATTGTTTCCTTCAATTATG
ATACAACGGTATTGAGGTCACTATGGGGTGAAAACCCGGTAGCAGTTGAT
ACAATGAGAGATGGTAGAAAGTCACAAATTGATACTTGGATGGGATTGAA
GCTTGTGGAGACATTGACAACAGAAGGAAGTTATGTCTACCAAAACAGTG
GTCTCAAATTCCAATACTTGATTGCAACTTTTGTTTTGGAAAGACAAACC
CAGTACTACATCCTCAAAGGCTTTATTCCAAGCTCATTGTTGGTCTGTCT
AACTTGGGCAAGCTTTTGGCTACCAACAACTAGCTATCCAGCTAGAGTGG
CACTTATCTTGACCTCATTCTTGGCGTCTATTGTGCTCTACCAAGGCTCA
TCCTTACATATCAATCAGATGACAGTCATGCAAGTGTTTTTATTGGGAAA
TATTGCTTTGATTGGATTAACCCTACTTGAATACTTGCTAGCAGTAAAAA
AAGAACACCAGATTGTTAAGTTCACAGTAATTTGGGGGCTCCAAATGTAT
TGTTGCTACGGACAACTGGCTAGTTTGAAAAATATGAACATGACAGGTTA
CAGTAAGGTCTCAATACCTTATTTAAAAAACCACAATAAAACTTTGGACG
TTCTAACCTCGATCACGGTTTTGAACATTGGTAATTTGAATACGGAAGAA
ATGACATTTGAAGTTGAAGTATATTTTGATATGAAGTGGATGGACCCAAG
ATTGGCTTTCAAAGAATACCTCAACGCTTCTTATGTCCTTGTCCCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000121_pilon | genome | sc0000121_pilon:156909..159264 - |
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