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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:413337..418199- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14443.3.p1 ID=MSTRG.14443.3.p1|Name=MSTRG.14443.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4863bp|location=Sequence derived from alignment at sc0000120_pilon:413337..418199- (Clytia hemisphaerica_ch_hm2_pilon)
ATTTTACAACAAGTACGTAAGGGATGAAACAGATGTTATGAAAATGGAGA
GGGTTATATCGTACCCAATGCGAGAAATAATTATCAAGTTACAGTAAGTA
AGTAAGTATTTATTTAACACATCTGAAAATGATACAAGAGGCGGAATCAA
CAAAATAAAAAGGAAGGAGACCGCCTTATAGCTAAAAGCTAATCAAAAAA
GATGCGGCCACCTAAGTGCCGAAAAAATTGAAGCAATAAAAAAATAGAAT
GAATTTTTATTTTATTTTTTTGCTTTCTTGGTTGGGGAGGGGGTGTGCTC
AGTATTCCCCAATACAGTGAGTGAAGGCAAGAGATTTAATGATATCATAA
TCAGATGAGCTCAAGGTTATATCAGGGTATGATCGCTGTAAACAATTCCA
TTGTGTTATGCAGGTTTTAGTAAATGATTTGTTACCAAAAGTTTAGTGTT
AAAGGAAGGAACAAAAAGTAGTTTCAATTTTGCTCCTCTGGTACCTTGAT
TATCATCACCATCAGCATCAAGCTGAATGAAGTTAAAAAATTGCAAGAGA
TCGAAAGGTAATCTGTTGTTCAAGAATTTGTGAACAAAAGAAATATTAAA
GGCATCTGACAAGGTCGAAGATTTTGAGAATTTTAAGATCTGAGAAAAGT
GGAGAAGAAGGGCATTGAGAGTTATTAAAGGTCATGAGACGTAAGGCTTT
CTTTTGAAGAATAAAGATAGGTTTTGATGTAGTATTATCAGTGAGTCCCC
AAAGTTGGCCAGTCAGGAACAGTCGCCTTATTAGGAGACGCCTCCTGATT
AGGAGACGTCTCCTGATTAGGAGACATGTAGGTCGCTTGGGGTCGCTTGA
TTAGGAGACCCGTCTCCTAATTAGGAGACATAAAACTTTGAACTCAATTT
TAAGGGCTTTAGGCTTTTCCGCGCATTTTGAAACTAGTTTTAATGGAAAG
AGCAGCCTCGAATTGGTAAAGTTTTAAAAAAATTATCAAAATTTCTCGGT
GCAATCGATCACAATCCTAATATAAAGCACTACAAGGAAGCCCCCCTGGA
TTTTTTTCATGTCCGCCATTTTTCTTTTTGAGACGCTTTTGTTCAGAAGA
CAGATTCTTACTTCTGATTGGTTCTTATGGATTATTAGAATTTGTGATTG
ATTCCACCGGTGGATTTTTCTGAAAATCACCATATGGTATCAATTTTTTG
TGCTCTTTCCATTGGGATCAATCAAATCATGCGCAGTTTGCTCGTTCACG
AGATAATTACACCCGTCTCCTGATTAGGAGACGTGAACCTCCTGATTAGG
AGACGGGTCTCCTAATCAGGAGGCGTCTCCTAATAAGGCGACTGTTCCTG
ACTGTTGGCAACCATATTGTAAATGAGAATGGAAAAGAGCATAGTAGATA
TTAACAATGGTTTTTGTTGAAACATAGTGCCTGAGTTTTGATATAATACC
ATTGGCTCGTGCAAGTTTTGATGACAGAAAAGTGGTGTGCGCTTTCCAGT
TGAGGTGAGAGTCAATCAACATACCTAGATACTTGATATGAGAGCTTTGA
AAGATTTTCTTACCTCCGATTTTAAGGCAAGGATTGAAAGCAAGAGTATT
ACAACAGAAAATGATGAAAATTGACGATCAAGAAACAGAGCTGAGTTTTG
TTCCTTTTTTTACGGCAATCAAACTAAGGTGAGATAAAAATGGCAATTAT
TGCTCTTTTCGCGAGGGTGTCAAATACCACGTGTGTTCAATAATAAAATC
AATTTTTACTTCCAAAAACGGCAATAATTGCCGAAAACGGCAATTTTCAT
TTGTTTACTTTTTTATTTTTCTGCTGATTCAGCAGCGAGCAACATTTCAT
CGCTGAAAAAATGGGAGGTCGTCAGTAGTCTGACACTTTCTAGTCCGACA
GTAAAAATGTCCGACGTTGGATTTGACAAATACATCAGTATTCCGACAAC
AATTTTGTCTGACAACGAGTCCAACGAGTTCCGACTTTGAGGTTGGGCCC
CTTAGGAAATTGGATTTAGCTGTTTTTACGACCCTTCTTTTGGCGGGGGG
GGGAGCAGAATTAAAGTTTGTGTTTTACAACCCTTATGGCATAATTCTGG
ACAAGCAAAAAAAGGGACTCTTAAAGGCGGTGCATTCTTTTTGTTATCAT
TGTTTTTATGACTGGACTACATAATTATTCAACAGGACATCCTCTTTGAA
AAAAGGTCTATTATGTCAAAATGCCGCCAAAATGAACATATTAATAATAT
TATCTCATTGAAAAACCCTTATTCAACATCGACACTCTAAAATCTTTCGT
CCACGGACAAAAGTTACGTCGGAAAAAAAACTTCTAGATTGTAAATATAT
CTTATAGATTCGGACTATATACTGTCGGACTAGAAAGTGTCAGACTACAC
CCGAAAAAATTGCCGTTTTTGGCAATAATTGCCGAAAAGAGCAATAATTG
CCGAAAAGAGCAACAATTGCAGTTTATATCTTTAAACACCCAACTGTGAA
CCATTAGCCGATTAGGCGGCAATCACAAGTCAGACAGTACTACTAATCGA
TAAATTTGATTATCGAAGTAATCAAACGACCATTTATCGATTAACAATCG
AATTTCGAGTACCAAAATTTCAAAATAATTGTCAGTCTTCTATCACTTTC
TTAACAACCCTTTAAAGACTCGATAATCGTTCGAGTACTTTGATTATTAT
TAATTACTTTCGATAACCAATTGATTATAAACTTTCATAACCAGTTGATT
ACATAGATACCTTGGAAAAGGACCATTCCAGAATTTGTCTCTAACAGGGG
GCCTGCGACACAGGATTTCTGAGGGCAAAAGTTTTAACCAAAAGGTTTGT
CACTAAATTAAAGCTGGGTTTTAGCAGCTTTAGCTGGGTTTTGGTTGATG
AAACTGGGTCTTGGCCGCTATCAGTCAGATAAGTGGGCTTTTGCAGCTGA
ATCTTGGTATTGGCCACTAAAGCTGAGTTTGACTACCAACCAGATCATGA
CACAGGTTACTATGGTTTATTGATTAGCTTCCAACCTACTAGCATTCAAA
AATGCTTAATTCCATTTAATTATTTTTTTCTTCTTTCTCAATTGCTCTTA
GCTTTTTAGGATGACTTCTCAGCCCAGTCGATTTATTTTTTTAAATTTGG
ATCCTTTCTGAGGAAGAGTCATTAAATTAAAATCACTATTTAAAACTACT
TTGTCAGTCCGTCACCACTTTACTCTCAGGTGCGTAATAAACAGGGTGAT
CAGAGTAAACAGGTGGTTGGAAAAATCTGAAAATTTTGATAAATGTGGGG
TCCTTTTAAGGTTTCAGGGGGTTGGCAATAAATGGAAAATTTTACAAGCG
GCTCGGCTTTTATTAGGCATCTGAGAGTATACACTTTCTACAAAGTAAAA
AGATGAAATTAATGCTGCATACAGCTGCTACTGCTTTAATCTTGGCTCTG
CTTACATACATTGTTTTTCATAAGAAGAACCAACAACACAAATTATTGAT
TGGGATTCTTTCCTCAAGAGATAATTTCATCCAGAGGGATATCATAAGAA
ATGGTCTTCTGAAAGGTGCCGGCAATCAGAGCGTTACATTCAAATTCATA
GTTGCCAAGCAACCATGTTTAATACCATTTGAATCTCGGATTGATAAATA
CAAATGTGAACAAGCTTCTGGATCTGAAAATGGAGAATCTTACTTGCACA
ATATATATCAAGATATTAAGGAACCAGTACATTCAGAGTTTCAATACTCT
ATTCAAGGTATTGATTTTGATTTGTTGCACGATGTTGAGGTAACTGGTCT
TGGTTTCATGGATTTCAATAGAGATGGGATAAACAGTAGTGTTAAAGTTA
TTTTATATGATAGAGTAACTTTTGATCCTGTTATTGCAATCCTATTCCTC
CCCTTTGCACAAGGAAAACTTGTTGAAAATTTCAGGTTCAAAAATTGTCA
AAAACTGTTTCTTCAGAAAGGGTTTAAGGGCTCTTTGGTGGTTGAGAATT
CAGAAATAGCTCCACTTTATTTCACATCCAGCTGCAATATCTCCTCATTG
TTTGGTATAATTAATGGACTACGATTTGGTCAGAACCCAGGAAATTTTCC
ACCCAATTTTTTGAAACATAAAAGTTGCCCTATTGTTGCAACTATGTCCA
TCCTGACAAACTTGAGCACTATATCAAAAAACTCATCATACTTGACTAAA
ATGTCTCAAGAACAACAGAAGCTGAGCATTGAGGTTGATAAATTTAATGA
TATTTTACTTGTTGATACTGAGGAGGTTTACCGTAATCTTCCTAGGAAGA
TGCTTCTGTTTTATCAATGGGCATCAACCCAAGATTTTGGTTTCATGCTG
AAAACAGATGATGATTGTTATGTAAATGTAAATGGTATCTTGACATTTTT
AAAAAGTATTGAGCTGTTCAACATTTCAAATTTATGGATTGGTAATTTTC
GTGAGAACTTTGCAATTGATAGACATGGGAAATGGGCTGAACATGACTTT
CAAGCAGTCTCATACCCTCCTTTTGCATGTGGGTCAGGTTATCTTCTATC
AAAAGATCTAGTAGAATGGATAGCTCTGAATCATGGTAGATTGAACTTTT
ACCAAGGGGAAGATACTTCACTAGGGATATGGCTTACATCAATTTATCCA
AACAGAATTCAGGATGAAAGATTTAAGTGTGCACGAACTTGTGAAGAAAA
TCTTTTCTCACTCCCTGAGAATAATATAAAACAACTGGAATATTTCTACT
CAAATGGACATAATTCCTTCAGCTGTAATGAAACTATAAATTGATGTTAT
CTTTAGGGTTGTTGTTTTTTATTTTTGAAGAAAAACTTTCTAAAAATATT
TTTGATTATGTTC Coding sequence (CDS) from alignment at sc0000120_pilon:413337..418199- >MSTRG.14443.3.p1 ID=MSTRG.14443.3.p1|Name=MSTRG.14443.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=495bp|location=Sequence derived from alignment at sc0000120_pilon:413337..418199- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCTTCTGTTTTATCAATGGGCATCAACCCAAGATTTTGGTTTCATGCT
GAAAACAGATGATGATTGTTATGTAAATGTAAATGGTATCTTGACATTTT
TAAAAAGTATTGAGCTGTTCAACATTTCAAATTTATGGATTGGTAATTTT
CGTGAGAACTTTGCAATTGATAGACATGGGAAATGGGCTGAACATGACTT
TCAAGCAGTCTCATACCCTCCTTTTGCATGTGGGTCAGGTTATCTTCTAT
CAAAAGATCTAGTAGAATGGATAGCTCTGAATCATGGTAGATTGAACTTT
TACCAAGGGGAAGATACTTCACTAGGGATATGGCTTACATCAATTTATCC
AAACAGAATTCAGGATGAAAGATTTAAGTGTGCACGAACTTGTGAAGAAA
ATCTTTTCTCACTCCCTGAGAATAATATAAAACAACTGGAATATTTCTAC
TCAAATGGACATAATTCCTTCAGCTGTAATGAAACTATAAATTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:413337..418199 - |
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