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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:407512..413157- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14443.2.p2 ID=MSTRG.14443.2.p2|Name=MSTRG.14443.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5646bp|location=Sequence derived from alignment at sc0000120_pilon:407512..413157- (Clytia hemisphaerica_ch_hm2_pilon)
AAAATAATTATTAAAATAATGACTAAATTCAATGATCAACTTTCAACTAC
CACTGGCAAAACTGAAGAACTTCAAAGCTTAATAGATTCCCTCAATCCAG
GTATGTAACCCATGTCTATTTTCATTACTTTTGGCTTTGTTCAACTTAAC
TAAAAGATCTAAAAGGATCATTATCTCCTTTGTCGATAAATTGAATACAA
TCAAACTTTCTCTCGATTCACTTAAACTTTTTCAATCGCACCAAATCGTT
ATAATTTTGTCAATATTTTAGAGGAGGAAGTTGGTGTTACTACTGAGGAA
GCTGATAAATTAAAGCAATTACTCAAAAATGATTCTGATAAAGTCAAATT
GTTGGAGCTGATTGCAGATTTGTCTAGAGTTGGTGAGTGTTATCAATATG
TAATGTTTTGACTGTGAAATCAGAATAATTCAAATTATCACAATTTTAAA
AGATCTGTCTGTAAAAACTTTATAAATTGCTATGAGAGCACCTACTTTTA
AATAAAAAGTAAATTCATATGATCTATAGAATTGTTATCTCTTTTTTTAA
TCTTTTTCTTAGAATCTAACAGACAGAAGTTTACTGACAAAACTTTTTTT
GAAGACTTGATTACCTTTGTCAATAATGACAAGCCAGATCTGGTATTGCA
AGCTATCAGATGCTTATGTAACATTAGCGCTGAAAACGGTAAACCAATTT
CTTTATTATTTTCTTTTCAAAGCTAGCTTCAATTGCTACTGTTCAAAACT
AGCTTTAATTGCTACCGTTCCTTCAAGATAGAGCTAGATCATTCAAATTT
TGTATAGGCTTTGTCTCAGAAATTATTTCTGTTGGTTGAAACCTTTAGTT
GATATTATTTTTAATTATTAATTGTACATAAATAACTTCTCTATTTGGAA
CTTCTAGAGGATGCAAAATCTATATTCTGTGAATTTGAGGGTGTGAAGAA
ACTCTTGTCGAAAGCTGAAGAGATTATTGATAAAGATGATGCTGCTTGGA
ACAACTTGGTATGTCCTGCATGTAGTTGTATTCAAAATCTTGTTGTTGAC
AGTGGTAAGTGTAAAATGCGAAAAATGTCCCGTACTCAAATCCAGGACTG
TAAAATTTTAGAATAAGATTTTCTTGATAGGTGCTATGTAGTAAATAAAT
GAGGTTCTCTAGCATTTCGTCGAAAATAATTACCATTAAGCTGAAAAAGT
ATCTTTAAAATTGTGGAAAACTCAAAATCTCTGGTATCATTTTATGCTTC
TAACGTTTTCAGACCTCTTTATTTTAAAAACATAACATCAAAAGTTTTAT
TAAAGCAAAATTATCAATTCGTCCTAAAATCTTTCTTTTTTCCATAGAAA
CTGTCCATAAAGCATTTTTGAATGAAAATGCAATGAATGTACTGTGGAGA
TATCTTGCAAAGTTTCATTCTAAAGATACAAAGATTGCATCAGTCACTCT
CTCAGGGCTATCTTCGTTAGGAGAAAATGGTATGTAACTTTTTAAAGCAC
TTAGTCCCATCCTCCTTATTTTATAAACTGATGTATACAGGACGGGTTTG
GGCTTAAAAAAGTTTTCAGTAGGAAATTCGAATTTAGCGCTGTCCTTATG
ATGATCAAACTGACTCAAAACTACACTTCTTTATCTTTTTATAGATTATG
GTTTACAGAATTTATACGATAGTGGTGTTCTCAAACTTGTTGTTAAGTTG
CTTAATGTAGCATCTGATGAGACAACAAAACTGATCTTTCAAAATCTCTT
AAAAGAAGTATCTAACCAAGGTAGTTTTTTTTGCTATAAATAAATCTCAA
TGCCAATCATTATATCATCTCACATGACCCTCTTATCTTTTTTAAAACTC
TTAACCAAGTCATAAGGAACATCTTAGTTTGACCTTTTGACGCCAAATCA
AAGAGTCAGGATGATATGAATTATCACCAATATTAGTTTTAGATAATTAA
AAGACCTGACGACTTGAGAGTAATTGTCGATTCCAAAAAAAATATAGCTT
CCTTAGATGTATTCCAGATAATCTATACATAGGAAAATCATCAAGGGGGG
TTCCCTGTTGAAAAATTTCCCTAGGGGACTTGAGAGATTTTTAAACTGGT
GCTTTGTGCGGTAGTCATACACAGCATTGCACAATCATATTTAAATGTTA
TAATGTCAATTTTTAGAACCTGGTAAAAAGTATTTGAACCAATGTGATAG
TTTTACTGAGATTTCAAAGATCATTGAAAACAGGGCAAACTTCAAGGAGA
CAGAGATTGATGATGTAACTAAGGAAATGGCTGATTTTGTTGTGGTATTA
ACCTCTGGGGGTACGTGAGAAAAAGACCTTTGTTGTATGATTTACTGATT
TTTACAGATAGATGCTTGTCTGTTTTTATCTAGTAGTGTGGGGGCAGGAG
GGGCAGTTGCCTCCCCAGTTTGCCCAAATTTTGGTCGATCCACCACGCTA
CTGTTTCTATCATGGAGTATTCGTTTGTGAAACAGAATCAAGTCTGTTTC
TGACATTTTTTAAGGGGCTAACTTTTGGGTAAGCAGCACTTAATTTTGTG
ACCTAAACACTAGTCACTTTGGTGTCTCATTATCCTCCAGGCCTGATTAT
CCTCTATATGATTTGTTTTTTCTTCTAGAGGAAAGCTTTAATGTATTGAA
GAAATCTGACCCAGACTTTTTGAAACGCTTTTCCAGCTGGATTCAATCAC
CCAATAAGCATATCCAAGTATCTGCTGGTTTGGCTCTAGGAAACTATGCT
AGGGATGGTGAGAGAGAGCACTTCGTTTTATTTTCTGATACTATTTGCTA
CTTTTCTGACTGCCTTAAAAATGTTTGTTTTCACCAGAAGAAGCCTATTG
ATATTGATGGGGGTGAGGTCTATAGAGAGCTGAAAAGTCAATTCAGTGGA
ATTAATTCTCAATGGTTTTGTCTTTCTTTTTAGGCGAATGAATTTCCAGA
ATCTCTTTCATTTTTCAATGGACCTTGAAAATTCTCATCAAAGTAATGTG
GTTCTGTTAAAAAAGGCGGAAAGGCTAATGCTGATGAATTAATTTATCTT
ATAATATATTTGCTTACACTATTAATTTATCCCCCATTTTACGAAGATTT
AACTCAAATCAATTGTTATTTTAGAGGAGACTTGTAACGACATTGTGAGG
ATTGGAATCCATGAAAATCTGATCAACGTTATGACCGAAAATTTGAAAGA
TGAAGTATAATTATGCTGCTTTGAGCAAATTTTGCCTTTAGTTTCTTCAA
AGAAAATTTTAATACTAGCTTTCTAGGATGTGCTATAATTGTTTTGATAC
AAATCTACTAAATATGAAATAATTCAATACTTGTACAAATACATTTTGTT
TTCTGATGTTAGGTTATTTCTAAAAGTTAGTGTCGTGAAATTATCTCATA
ATGCATTTTCTTTTTCAGAGCTTCAGTGATAGAGCACAAGCTTATGGAGC
TTGCTTACGGAATTTATGCATACCAGGTAAGTTAAACTATAGTCTTTTTG
TAAAATAATTATTTTGAGTGAATCTCTATTCAAACCATCACTCGTTTTAA
GACGCCACAAAAGAATTAGCATTACGGGACAAGGGTGTCTTTAAGCTTTC
ATGCAATAATGCAATTTTGAAAAAGGAAAACCCTCGCATTGCTCTATCAA
TTATCAAAATTTTGATGGCAATAGACAAGAGTAACCATTATTGTTCCTAT
CATTACTGTTCTTTTTTTCTCTTTTCAGTCCACAATAAAAAGATACTGTA
CAAAGCTGGCCTACACACGATGGCCATATCATATATCATGGAAAGTGACA
GCCTAGCAGCTCAATTCAAAGCATTGGCAATACTTCGACTCCTTGTACAA
GGTATTGAAGAGGTTCTTACGTTTTAAAATTTCACTATTGGGCCATAACA
CTGTGTTATACTTTAAAATAATCAGGTATGAAATGTTCAATAACAATAGA
ATGCAAAATTTGATGTAAGCACGCATAACTGGCTTAAACTCATAGTTTAC
CACTTTACCACACAATTAAGGTGTAAAGTACATTCAAATTTTTTTGGTGC
AAATTTGATTACTATGAATATTATAATCTCACAGATTTCATTATCATTTT
CAGACAACATTGAATTATCATCTTCAATCTGTTTGAACAAAGCACTAGTG
GACAAAGTATTGGAACTTGCTGGAACATCAGTTGTGTCATCAGTACCTGC
TGAAAGTCAACGTCTCCTGGCTGCTGCAATCAAGTACAGTAGTTCTGAAG
GTAAAATGCTACACAAATTAAAAAGGCTAGGGCATAGATTAACAAAACTG
ACTCAGAATGTACTGCATACTTCAAAATATATTTTCTCGTGGAATAAAAC
TGCATCTTTGATTATGTCATAAAGCTTTATGATTTTGAAAAGAAACTGTA
GAATGGATTTCTAGGATCTGGTGATTGTACTAGACTATACAATATTGTTC
AAAGATGTAAACCTGGATCTTTCTGTTTATCTTTTCAGTTACAATAAAAG
GCATCTTGAAGAGTGCCACAGTTTTGGATACCATATTAGCTTTATTGTTG
TCAGAGCATACTATCATGCAAAGTGAAGGTTTGATCGCTCTTATCATGAT
TGCTGCAAACATGCCAGGTATGTTCACTAAGTTTATGTATGTGTGTTTTT
CTGCGACGGAGATGGTAAGGTTCTAATTTGTCTACACCATGACTGACTGA
GGACGACGGTCAATCAGCATTTTTACCATCCTCGATTTTGTGGGTCGCAA
CTGCGGGTTGTTCCAAATCGCTTCAGTCATAAATTACATAAACTTGCTAT
TAAATAGGGTGGGATAACTGATCCTGCATGGAAACAATGTTGCTATTTTC
TAGCGATTCACTTTAAGCTTTAAGGTTCATTAGAATTCACTGATTTTATG
GACATGCACGAGGTGCTTGAATATATTTCCGCGATGAGTATTGAAACACA
CTTTAAATTTATTATAGATTGTATAGACTTATTTAAAGAAAAAGAATGTG
TGCCAAAAGTGTTCACATTGTTGAAAAAACCAGAGGTACAAGCACAAACT
TGCTTCAATGGACTGACTTGTTTTCAAGCTGTCATGAGCATAAGTAAGTT
ACCAGCTTTTTAATATCGTGCGTAAGCTTAGATCTTGCTTTTATTGGATC
ACCCCTTAGTAAAGAGGTGTAATCTTTTTCCTAAAACAAGGTTTCCAGGC
ATTTGCTCTAGTCAACAATATTCTTAAAATCTTTTAAAATGTGTATCTGT
TTGTGTTTTTGTTTCATGTTTCTTGTGTTGTAACTAAAACGTCATACCAA
TAACTTTTATGTTTATAGTTAATCCGATGACTTATTTTGACCTACAAGAG
ATCATACTGAATTTGTTGTGTTCCATTTTCAGATGGAGGAAAAGACTTAC
TGGTATCCAATGGTGTTGATGAAGTTTTTGAGATTCTCAGCAAACATGGC
GAAGACATCATCAAGAATAAGGCAACAGAAACCAAAGAGCTGTTAGATTC
TCTTTAACAAAATACAAGGTTTAATAGGGAGCTCGATAATTTTTCAATTT
CAATTTTTTAATGAATATTTATTTAAAAAGTATATAGCAGCAAGATGTTT
TGGAGAATGGTTAGGCAACATCTTTCTTTTTAAACAATCGTTCAAA Coding sequence (CDS) from alignment at sc0000120_pilon:407512..413157- >MSTRG.14443.2.p2 ID=MSTRG.14443.2.p2|Name=MSTRG.14443.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=909bp|location=Sequence derived from alignment at sc0000120_pilon:407512..413157- (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGAAAAGACTTACTGGTATCCAATGGTGTTGATGAAGTTTTTGAG
ATTCTCAGCAAACATGGCGAAGACATCATCAAGAATAAGGCAACAGAAAC
CAAAGAGCTGTTAGATTCTCTTTAAATTGTATAGACTTATTTAAAGAAAA
AGAATGTGTGCCAAAAGTGTTCACATTGTTGAAAAAACCAGAGGTACAAG
CACAAACTTGCTTCAATGGACTGACTTGTTTTCAAGCTGTCATGAGCATA
AATGCAAAGTGAAGGTTTGATCGCTCTTATCATGATTGCTGCAAACATGC
CAGATGGAGGAAAAGACTTACTGGTATCCAATGGTGTTGATGAAGTTTTT
GAGATTCTCAGCAAACATGGCGAAGACATCATCAAGAATAAGGCAACAGA
AACCAAAGAGCTGTTAGATTCTCTTTAAATTGTATAGACTTATTTAAAGA
AAAAGAATGTGTGCCAAAAGTGTTCACATTGTTGAAAAAACCAGAGGTAC
AAGCACAAACTTGCTTCAATGGACTGACTTGTTTTCAAGCTGTCATGAGC
ATAAATGCAAAGTGAAGGTTTGATCGCTCTTATCATGATTGCTGCAAACA
TGCCAGATGGAGGAAAAGACTTACTGGTATCCAATGGTGTTGATGAAGTT
TTTGAGATTCTCAGCAAACATGGCGAAGACATCATCAAGAATAAGGCAAC
AGAAACCAAAGAGCTGTTAGATTCTCTTTAAATTGTATAGACTTATTTAA
AGAAAAAGAATGTGTGCCAAAAGTGTTCACATTGTTGAAAAAACCAGAGG
TACAAGCACAAACTTGCTTCAATGGACTGACTTGTTTTCAAGCTGTCATG
AGCATAAATGCAAAGTGAAGGTTTGATCGCTCTTATCATGATTGCTGCAA
ACATGCCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:407512..413157 - |
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