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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:195761..199438+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14430.2.p1 ID=MSTRG.14430.2.p1|Name=MSTRG.14430.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3678bp|location=Sequence derived from alignment at sc0000120_pilon:195761..199438+ (Clytia hemisphaerica_ch_hm2_pilon)
cGAAATAATGCATAACGTCTGAgatgtaaaaaatgaatttctcaTCAATT
TTAGTTCTTGCGTTATTGACAATAGTGTCATATGTAGGCGCATCTAAATG
CAAAAGGAAGGTtagttttttcacttttcatacAAATTTCTTTCCAATTG
AATTCTTATCGCTAGATGTAAGTGTTTGACAGGGTAAGCTAAAGAGCCAG
AGGGCTAGGACCTTCTTCCTAGCAGAGCCCTCTTGATAAAGGGCGGAAAA
AACAAAGGGCACCGAAAAGGCGTTTCAAATGTCCCTCGTAAaaggttttt
attttctaattcatAAACACATTCGAAAACTATAATTTTATTCATCATTT
GAtcaatagcgaggttaagcaagaagctatctattacgtacggaatctat
tacgtgagtcTTTAGACTGGATCCGAGGCGTTTTAGCCTGATTCCTAAAG
CTTCACGGAATAGAGAAAAAAGAGGTTAAGCAAAAAAGGCGATCTATTAC
GTATGACGTAATGTCTATTTTTCCGTATCTCACTTTCGGCCCCAacttat
aaaattttcttttccagcTTTCTTGTTGGTGGTTTGGTCTATAAAATCCC
CTTACTTTCAATCTTAATCTACTAAGTTTTTCCCAAGACaaatgttttta
caaaaattaaaactagGCAAGCATAGTCAGAGTTTTCTCTGTAttacttt
tactatttttattcaacatttttataaacaaaaaatatgtctATGACTTA
TCATTTCAATGAATTCTTAACATTGCAATAgaaatatataatttcataat
ttcattccTAGTTTACATAGGTACCAATCAAAAATTActgttttatttat
aaacaaaacaataatCTGTAAGAGCATAGTGTACAGTCTGTCATCCTTAT
TCAGCTGCATTTCTATATGAATGCTTCACCATTACCATTAccaataaaaa
cacttttataaaaaagtgtgcaaaCCAGGTCTCGAGTTTCATATATGGCA
GGTGttccttcttctgcttctttaCATTCCAAGGTATCAATATCACCTTT
TTAGGAAGGGAGATGTCTCTTTAGAATCAACCAAACTTTCTGGAACGTTA
TAACATTATAATGTCGAAGAAGTTGAAGGATGACCAGTCAATAAACATTT
TTCAGTAAAGGATTGAGAACTTAAAGCAGTAGCGGTTGTCCAGAAGATAG
ATAGAGCTTTATATAATTTCAAGCTGATTTGTACGTACAATATATAGTTG
ATGATGGAGAGCAGAAATTGAATCTCGTTGCTTAGTTGCAGCAGTTGAAA
TTGGAAcAataaataaagatttcttctgTTATGCTTCGGGTGGAAGGGTA
AATTTATTTGAGCTTAGCAGAGCAGTCTTTTTCGTGTTTGTTGCTTTTTG
GGTGTGGGTGACATTAAAGCTTCTTCGCACTTGATGGTGGCACCAAAGAA
ACactgaaaacatgaaaaagaaatatggttacATGCTGTTCATTGTAATG
GTTACTTTGAATGTATTTGGACTTTGAGAGCATATaaaaagcataagata
aaaaagagaagaaaaacaaaagaaccagaaagaaacttcagtttgttttg
gtttgataaaaaagtcaGCAAAGATTATTTTATTACACTTACATCTTCGC
gaaaaactcacgtaatagattccgtacgtAatagatagcttcttgcttaa
cctcgctaatagcTTATTCTCTCACTCAGCTAGAGAACGTACAAGGAGCG
TAAATATATACTGTAGTccgtatacacgtttttttataaaaacatccaaa
agtttttaagccttggatgttcttaacttttcgagttttaagcgtaaaca
ttttttttaaatgttcattttttgagtatttttgccaattttcccGAGAA
ATTGGCTGTTTTTCGAGTCCGTTAAGTCTTAAAATGTTCTAAACTTGTTC
TTAATATTTTGGCCATCGAAGTCTTATGTTCTTATATAGTTTGTTCTTAT
AAAAAAACGTGTAGTATCAATTTCGTACACAAAACCACATACACCACTTT
TTGATTTTACTGATGGACGTGGTACAATCTACCTTCGTAAGCGCTAACAG
TCAGAATCATAAAAAATTtcgTTTACTCTAAGGGGCTGGGCTCGAGTTTT
GTATAAtctcactttttgattttactgatggacgtggtACAATCCACCTT
CGTAAGCGCTAACAGTCAGAATCATAAATAATTCGTTTACTCTAAGGGGC
TGGGTTCGAGTTTTGTATAATCTACACTATGAAACTAACTGTACAGTATA
TCTTTGTATACAAGGGGTGCTCAGGCGAGCATTCAACAccctaaaatata
aatttcactCACTAATTCATTAATTTAGGTCCCTGACAATCACCATGGAG
CTCCGTCTCACACTGTCATCAAGGAAGGTACAAGTTCTTCAACTATTCAT
GCTTTCTCAAAACCATTTGACCATTATTTGGTAAAGcgaattcatataaa
aacattaagTTTATTTTCTACATTCGcttaagtgtgcactaaTtttTTTG
GCTTGAATGTGGAAACCACTTTCGAGAGATTTAGTTCAATTAGACTGACA
TGGTCTCCCCATAGTAacaaaaaagagtgtaatatGTCGTAGGATTTCTA
GAAAACTTTTGAGGgcttcaattcatgatattcataacGTTATGTTTTAT
ACGGAGGCACCGAAAATAGCCCGAACGTTTGCCACTAGTTTAATTTTTGT
AACATTCAAATCTAGTGGCAAACATCCAGTCTTTTCCCGTATAAAATATT
ATGTCATGAATACCATGAATTCATTTGTATTTGTTTTACTTCTTAGAACA
ACCAGTAACATCAGGTGATCTAAAACTTAGTTTACCAGTTTTATCTGCTG
AGTGGAacgtcaaaatcaaatttttaatcaCTGGCTTCCCAGTCCCACAT
TCCAAATATTGTGCCATCTTTAGAATGTCGAATGGTGACGTTTACGGTAC
ACGCACACCAGCCATCTCTGTTAACACTGAAACTTCAAAGCTAATCGTTG
CTTCTGCAGTTAGTGGCAACGCTAACAGATACAAGTTAACATCATTTCAA
ACCAATACATGGTATGATGTCGAAGTCGACCAATCCTACAAAGGGAATGG
AATATACCAATATTCCATCATCGTTAATGGTGATCAGATTGCATCGGAAG
TGAACACACAAGCTATTCAATTTTACAACGTTGGTGTTTATGCAGGGCAT
CCATTTCCATCTCAATTATCCTGCACGGGGGTTATAAGTTATCTGAAAGT
TACaaactttttgtaaaattaatcttaaaatctaaataactgttaaaaaa
attgcatcATTCCAAGCTTAGTAACGGAGGGAGGACGGCTTCAAACTGTA
CCGTACCCCAATCTCGAAACGTAACCCTTACTAACCCTAATCCTCAAATC
TTGACAGAATAGAGAGTTTCTGTGCCACTAACttgatcgggaagattctt
ccgaaatgggaagaaccttcccgaacgggaagaacttactctattttttt
ctgcccgttttggaagattcttcctctttgggaggttgaaaattgactga
atctcggcgaagctgtacgatgaccggcgaaagttgaaactttttggagg
tgaagaagcatcaaattttaaggttttt Coding sequence (CDS) from alignment at sc0000120_pilon:195761..199438+ >MSTRG.14430.2.p1 ID=MSTRG.14430.2.p1|Name=MSTRG.14430.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1791bp|location=Sequence derived from alignment at sc0000120_pilon:195761..199438+ (Clytia hemisphaerica_ch_hm2_pilon)
atgaatttctcaTCAATTTTAGTTCTTGCGTTATTGACAATAGTGTCATA
TGTAGGCGCATCTAAATGCAAAAGGAAGGTCCCTGACAATCACCATGGAG
CTCCGTCTCACACTGTCATCAAGGAAGAACAACCAGTAACATCAGGTGAT
CTAAAACTTAGTTTACCAGTTTTATCTGCTGAGTGGAacgtcaaaatcaa
atttttaatcaCTGGCTTCCCAGTCCCACATTCCAAATATTGTGCCATCT
TTAGAATGTCGAATGGTGACGTTTACGGTACACGCACACCAGCCATCTCT
GTTAACACTGAAACTTCAAAGCTAATCGTTGCTTCTGCAGTTAGTGGCAA
CGCTAACAGATACAAGTTAACATCATTTCAAACCAATACATGGTATGATG
TCGAAGTCGACCAATCCTACAAAGGGAATGGAATATACCAATATTCCATC
ATCGTTAATGGTGATCAGATTGCATCGGAAGTGAACACACAAGCTATTCA
ATTTTACAACGTTGGTGTTTATGCAGGGCATCCATTTCCATCTCAATTAT
CCTGCACGGGGGTTATAAGTTATCTGAAAGTTACaaactttttgtaaatg
aatttctcaTCAATTTTAGTTCTTGCGTTATTGACAATAGTGTCATATGT
AGGCGCATCTAAATGCAAAAGGAAGGTCCCTGACAATCACCATGGAGCTC
CGTCTCACACTGTCATCAAGGAAGAACAACCAGTAACATCAGGTGATCTA
AAACTTAGTTTACCAGTTTTATCTGCTGAGTGGAacgtcaaaatcaaatt
tttaatcaCTGGCTTCCCAGTCCCACATTCCAAATATTGTGCCATCTTTA
GAATGTCGAATGGTGACGTTTACGGTACACGCACACCAGCCATCTCTGTT
AACACTGAAACTTCAAAGCTAATCGTTGCTTCTGCAGTTAGTGGCAACGC
TAACAGATACAAGTTAACATCATTTCAAACCAATACATGGTATGATGTCG
AAGTCGACCAATCCTACAAAGGGAATGGAATATACCAATATTCCATCATC
GTTAATGGTGATCAGATTGCATCGGAAGTGAACACACAAGCTATTCAATT
TTACAACGTTGGTGTTTATGCAGGGCATCCATTTCCATCTCAATTATCCT
GCACGGGGGTTATAAGTTATCTGAAAGTTACaaactttttgtaaatgaat
ttctcaTCAATTTTAGTTCTTGCGTTATTGACAATAGTGTCATATGTAGG
CGCATCTAAATGCAAAAGGAAGGTCCCTGACAATCACCATGGAGCTCCGT
CTCACACTGTCATCAAGGAAGAACAACCAGTAACATCAGGTGATCTAAAA
CTTAGTTTACCAGTTTTATCTGCTGAGTGGAacgtcaaaatcaaattttt
aatcaCTGGCTTCCCAGTCCCACATTCCAAATATTGTGCCATCTTTAGAA
TGTCGAATGGTGACGTTTACGGTACACGCACACCAGCCATCTCTGTTAAC
ACTGAAACTTCAAAGCTAATCGTTGCTTCTGCAGTTAGTGGCAACGCTAA
CAGATACAAGTTAACATCATTTCAAACCAATACATGGTATGATGTCGAAG
TCGACCAATCCTACAAAGGGAATGGAATATACCAATATTCCATCATCGTT
AATGGTGATCAGATTGCATCGGAAGTGAACACACAAGCTATTCAATTTTA
CAACGTTGGTGTTTATGCAGGGCATCCATTTCCATCTCAATTATCCTGCA
CGGGGGTTATAAGTTATCTGAAAGTTACaaactttttgtaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:195761..199438 + |
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