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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:136284..139494- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14424.1.p1 ID=MSTRG.14424.1.p1|Name=MSTRG.14424.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3211bp|location=Sequence derived from alignment at sc0000120_pilon:136284..139494- (Clytia hemisphaerica_ch_hm2_pilon)
GTTCTTTCTAGGCTGATAAACAAAGGGCACACTGTAGAGTTGATTAAAAT
TGAATAAAAAAACAAACAAACATACCATTAGAATGCCTTGCTGTTACAAT
ACAACTCGTTCATTCGTTCTATTCTTCTTACTGATTGGCTTAGTTGGTGT
GGTGTTGGCTGGAGTTGTGGATTTCTGGTGGAAAAGCGATCTACAAGATA
AATACGGTGATGCTGTTACTGAAGAAATGGGTAAGGGTCAACCTTTGTCT
GCCATCAACGGACGTTAAACCGTGCAGTAAGTAAGTAAGTATCTCAGCCA
GAAATAGACTTAAAACAACAAATTAGGCAAGACTCTTCGAATTTTGCAAA
GTTACGTAAGAGCCTTTTAGTACCTCGCTGTGGCGGAAGACTTGTAAACT
GATAAATATGTTGAACGGTGAAAAAGAATGCGGTTATTACATTTTGACTT
TTTCCCGACATATTTCAGACTCGGTCCCTTCTCAAGGGAAACTGATAAAT
ATTTATAGCCTATTGAAGAAATATCATTGAAAACGAAATCTCGAAGTGAT
AAAAATAGATTTCAAGCCCACAGATTGCATTCACACAATAACAGCCAAAG
ACACCAATTTTAATTTCTGAAAACTCGTCAGAAACGTCAGTAAATCTACT
ACGAATTTGTTTTTCTCATCTCAGGTTTATGGCGAACTTGTGGAGGTATT
TCAATCATTTCAAATATCAAACATTCGTCCTGTATTCAACGTAAAAGTTT
ATTCAAATTCGAAGAAGATGTTCTTGATTTCAGTAAGTAAAATTTAACAA
CCATCATGAATCGTAAAGCGTGAATCAGGGGATCAATATTCATGATGAGC
GTCCGTTATTCACACAATTTCAGTCCGCTCAGTTTTATAACTACAAAGAT
TTAGAACGCCTGCTACAACGAAAATGTCACTTCCAAAAAAAGCGTTTTGG
AGAATCATTTAAAAACTAATTTCAAGACTTTTATACTCAACATTATAATG
ATCGAATGAAATTTTGCTGGACTGAACACAGTTCAAATGAACCTCCGAAA
TTTCAAAAAAAAAAATAAGAAAAAGGGAGAAATTTGTTTCAACAAAAACA
TAAACCTTGCCTTTTTCTTTAGATTTGGATCTCATCTTGACTGGATTAGT
TGGCGGAGCATTCTTTACTTTTGTTTCACTTATAATGATCGCCATTTCCA
TGTGTCAGAAATATCCTTCCAAAGTTTTGATGGTTTTTCATCTTATCTTC
TTATTGCTCGGAGGTAAGTGAGAACGACAGAATATTTATATTATTTTTCT
TGGTATCTTTTACTGAAAAGGAGAAAACAGGTTTCTAATAAACGTTGCCT
TGCTCTCAAAGTATTCTTTATCGTTAGGCTGATTGAATTTATTTACTGCA
CCTAACCTTTCCCAAATATCAATTTACAATCACGAAGAATTTGATTGAAA
AAATGCGGAGTTAAAGAAGTAAATAATGTTTAATAATAATAATGTTTTTC
TTATCCAATTTCAGCTGCAGGAGGTGTATTTGGACTTGTATGGGCATTGA
TTAAAGTTGAAGATCGCACGCAAGACTGGGCATTCTATGTCTTATACGGA
GCTAATGGAAGTCTCGTGCTTTCCTTCGCTCTTTCGCTCATTCTTTTGTG
CGCGCGGGCGCCTGGTTATTACTTAGTCAAACGTGATGACGATTAATGAA
ATCATGTAAAAACTTGTACGTGTGTCCACAGACCTTTATATAGAGGTGTA
GAAATATTAGAAAATGTTGATGGTGTGGTCGTGTTTACTAAACAAGAACG
AAATTCTTTAACGATTTCGTGAATGAAAAAAATTGAAAATGGAGCAAGAA
GTGTTGCTATATGAACAACTCAAATTATTATTGGTTCAGATGGTTTTAAA
ACAAACACTATTGAAAAAGCCCACGTGACGTGGTATGGACAAGACATTTT
TTGAGATTTCCACTTACTCTTAAAAATGCAGTTTCGTTGGTTTATAGCGT
TGGTGTCGACGTGACGTAGCATTAGAACATTATTTTGAACTATCGAGATT
TTCTATGATTTGAGTAATCGAGAAAATTAAAAATAAACGAATGTTTTATT
AAAAGCAATGATGCTTTTAAGTAAAGCAATTTTCATTTAACACATACCAG
GCTAAAACTAAAATGGTAGCGGTAAGGTACTGTAAAGTTCTTTTGAAAAG
CAGAATTAATCTACCATTCCAATCATTATTTAAACCTTCAAGGATCCAAT
TATCGGTATATATCCACAATATTTTTAATGTGAGTCCTTTTTAATTTTTA
CTGACTGACTAGAGTTTTAGGTACCTATTTAACAGTACTCAAATGTTGAA
GAGATTACAGTTTTTAGTAGACTTGCACCTTATCGAGTGGTAGTACCATT
TAATTGAATTTTGTAAATTCTAAAATCAAATGTATAAAATATCTATATTG
TATCTTAGACAAAAATATATAAATAAATTGAAATAAAAAATTCTTAACTA
AAATCAAGTATTGGGGGGGGGGGGTGTAGTTAACTTTGAAGAACCAGGCA
TTTGCGCATAGTGTGTACGTACCTTAAGAGAAGAAATTTTGGTGCAATTT
GGCGGAATTTATTTTGTTGATTTAATAAAATTAATAAATTTGGCGAGAAT
TAATTCTGGCGAACGACCCATTTTTGTTCAATATCTTAGCTGAAAAAAAG
AGGAAAAAAGGGTTTTTAGCTTTAGGAGAAATAGAGACTGATTTGAAAGA
AAATTAAATTCGGCGAGAACTTATTTTGGCGAATGACCTATAAACTTGAA
TTTCCTTCCGCCAAGATTCCTTATCTTAAGGTATTCATACTTACAATACC
AGTGATTACATAATAATGCCGAAAATTCCAAAAAGGGGCGTTTAAAATCC
AAAAGGTTTTGATAGCTAAAACGTTAAATAAAATATTTCATCACATAAAT
GATTTTAAAACATTATGGTGTGTTCCATATCTGTAATTAAACATCATGTC
CTAATCCATACCATGAAGAAATGCTTCATTTAAACCAGTTCATGAGAAAG
TGGTCACCACAGATATCTTATATAAAACACCAGATAGAGCTTTTCCTACC
ACTGACCTTTATATACCCTGGACCAAGCTTCTCAATGCCAGCCAAGCAAA
ATCTTTGATCGGAGTTTTTTGAAAATTGGTACCCTAATGGCGGCACTACT
CGATAGCGGTG Coding sequence (CDS) from alignment at sc0000120_pilon:136284..139494- >MSTRG.14424.1.p1 ID=MSTRG.14424.1.p1|Name=MSTRG.14424.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2316bp|location=Sequence derived from alignment at sc0000120_pilon:136284..139494- (Clytia hemisphaerica_ch_hm2_pilon)
CTGCAGGAGGTGTATTTGGACTTGTATGGGCATTGATTAAAGTTGAAGAT
CGCACGCAAGACTGGGCATTCTATGTCTTATACGGAGCTAATGGAAGTCT
CGTGCTTTCCTTCGCTCTTTCGCTCATTCTTTTGTGCGCGCGGGCGCCTG
GTTATTACTTAGTCAAACGTGATGACGATTAAATTTGGATCTCATCTTGA
CTGGATTAGTTGGCGGAGCATTCTTTACTTTTGTTTCACTTATAATGATC
GCCATTTCCATGTGTCAGAAATATCCTTCCAAAGTTTTGATGGTTTTTCA
TCTTATCTTCTTATTGCTCGGAGGTTTATGGCGAACTTGTGGAGGTATTT
CAATCATTTCAAATATCAAACATTCGTCCTGTATTCAACGTAAAAGTTTA
TTCAAATTCGAAGAAGATGTTCTTGATTTCAATGCCTTGCTGTTACAATA
CAACTCGTTCATTCGTTCTATTCTTCTTACTGATTGGCTTAGTTGGTGTG
GTGTTGGCTGGAGTTGTGGATTTCTGGTGGAAAAGCGATCTACAAGATAA
ATACGGTGATGCTGTTACTGAAGAAATGGCTGCAGGAGGTGTATTTGGAC
TTGTATGGGCATTGATTAAAGTTGAAGATCGCACGCAAGACTGGGCATTC
TATGTCTTATACGGAGCTAATGGAAGTCTCGTGCTTTCCTTCGCTCTTTC
GCTCATTCTTTTGTGCGCGCGGGCGCCTGGTTATTACTTAGTCAAACGTG
ATGACGATTAAATTTGGATCTCATCTTGACTGGATTAGTTGGCGGAGCAT
TCTTTACTTTTGTTTCACTTATAATGATCGCCATTTCCATGTGTCAGAAA
TATCCTTCCAAAGTTTTGATGGTTTTTCATCTTATCTTCTTATTGCTCGG
AGGTTTATGGCGAACTTGTGGAGGTATTTCAATCATTTCAAATATCAAAC
ATTCGTCCTGTATTCAACGTAAAAGTTTATTCAAATTCGAAGAAGATGTT
CTTGATTTCAATGCCTTGCTGTTACAATACAACTCGTTCATTCGTTCTAT
TCTTCTTACTGATTGGCTTAGTTGGTGTGGTGTTGGCTGGAGTTGTGGAT
TTCTGGTGGAAAAGCGATCTACAAGATAAATACGGTGATGCTGTTACTGA
AGAAATGGCTGCAGGAGGTGTATTTGGACTTGTATGGGCATTGATTAAAG
TTGAAGATCGCACGCAAGACTGGGCATTCTATGTCTTATACGGAGCTAAT
GGAAGTCTCGTGCTTTCCTTCGCTCTTTCGCTCATTCTTTTGTGCGCGCG
GGCGCCTGGTTATTACTTAGTCAAACGTGATGACGATTAAATTTGGATCT
CATCTTGACTGGATTAGTTGGCGGAGCATTCTTTACTTTTGTTTCACTTA
TAATGATCGCCATTTCCATGTGTCAGAAATATCCTTCCAAAGTTTTGATG
GTTTTTCATCTTATCTTCTTATTGCTCGGAGGTTTATGGCGAACTTGTGG
AGGTATTTCAATCATTTCAAATATCAAACATTCGTCCTGTATTCAACGTA
AAAGTTTATTCAAATTCGAAGAAGATGTTCTTGATTTCAATGCCTTGCTG
TTACAATACAACTCGTTCATTCGTTCTATTCTTCTTACTGATTGGCTTAG
TTGGTGTGGTGTTGGCTGGAGTTGTGGATTTCTGGTGGAAAAGCGATCTA
CAAGATAAATACGGTGATGCTGTTACTGAAGAAATGGCTGCAGGAGGTGT
ATTTGGACTTGTATGGGCATTGATTAAAGTTGAAGATCGCACGCAAGACT
GGGCATTCTATGTCTTATACGGAGCTAATGGAAGTCTCGTGCTTTCCTTC
GCTCTTTCGCTCATTCTTTTGTGCGCGCGGGCGCCTGGTTATTACTTAGT
CAAACGTGATGACGATTAAATTTGGATCTCATCTTGACTGGATTAGTTGG
CGGAGCATTCTTTACTTTTGTTTCACTTATAATGATCGCCATTTCCATGT
GTCAGAAATATCCTTCCAAAGTTTTGATGGTTTTTCATCTTATCTTCTTA
TTGCTCGGAGGTTTATGGCGAACTTGTGGAGGTATTTCAATCATTTCAAA
TATCAAACATTCGTCCTGTATTCAACGTAAAAGTTTATTCAAATTCGAAG
AAGATGTTCTTGATTTCAATGCCTTGCTGTTACAATACAACTCGTTCATT
CGTTCTATTCTTCTTACTGATTGGCTTAGTTGGTGTGGTGTTGGCTGGAG
TTGTGGATTTCTGGTGGAAAAGCGATCTACAAGATAAATACGGTGATGCT
GTTACTGAAGAAATGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:136284..139494 - |
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