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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000120_pilon:39427..42760- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14420.1.p1 ID=MSTRG.14420.1.p1|Name=MSTRG.14420.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3334bp|location=Sequence derived from alignment at sc0000120_pilon:39427..42760- (Clytia hemisphaerica_ch_hm2_pilon)
GTTTCAGCAAATAAAAAGTAAAGCAAGAAATTAATATAAAAAAAATTATG
GGAATATGTTGCATGCACTGGATATCAGAGCTCGATATGTTCTGGATATA
CTTCACCAAATACTTTTGTTGATATTACAATTTTGTATCCAGAACCATCA
ACATAAAAATCCACTCACCAACGATTTTGGAGTTGCTTTAGCAGAAATTC
TGAGAAAGAATCTTGGGAAGTTTAAAAGGCGGAAGGAGATACACAAACAT
GATTATTTCACTGTGTATTTTTACGATGATCCTGGAACGAATCAACAATT
AAAAGCAAGAATTCCAATTGAAACTTTGGATATAACAATTCTGGCGAAAC
TAATCAATTTGGATTTTATGATATCAGAGATTCGTCAAAGATCACGATGT
TGCAATCAATGCTCTCAACAGCATAAGAAATGTACATGTGGAAACATCCA
ATGTAACAACAGGGCTTGTAAACTGGAACCATGCCAAGATATAAATTGTA
ATAATGCACAGAATTGTAATTTTATCGCTTTCAAACGATTTATTGGTTTA
GTCCAAGGATTCAGGAACTGTTTCGCTCATTTGAATGATCATACATTTTT
AAATGATCTGCAAAATGGAGTACAACATCTCCAAGATTTCCCTAACTTGG
CATGGGATGCTTTAATGGGTGAAGTTGTAACTGCATCATTGGAACCTCTT
GATTTTCTAAAATACAAAGCTTTTATAACAGATCACCAATTTAAATGTTT
TGAAATGGAATTGTACATTGGTGTTTTTAAAGACACTGATTTTCTTCTAC
CTGCTGTGGCAAATAAAGTGAAGCATTTCCAAAACGTTGTTCTTGGAGCT
GAAGGTATTGATGAAAATATTGAGAAGAAGTTCAAATCAAGTTTGAACGA
TTTCAAGAACAGCCTGGATACGCTGACTGTCAACTGGGACGAGCTAAGAA
CTCATCTGAACAAAGGTCAGTAAAGCACGACAATTTTAATACTCTTTGTT
TTAATAAAGCAATTCCAGCCAATCCATTAAAGTGTGAAGTCTCCTTTTTG
GACCTACCTGGAGGTGGAGGTCCTATAAATTTATCCGTCTGGATAAGGCT
ATCACTGTGTCTCACTAACATTCTGCCGATTGGTCCATGGCTTGGCAGCA
GGTTTTAGGTGCCCCCTAAGAATTCAGGTGACCCCTAAGATTTAGGTAAC
CCTTGGTTGCCAAATATTTTTGGTGACCCCTAAGCCAATGACGAGTAAAT
TTTTTTCGAAAATCCTTCTCAAACCATCAAACAAATGGTTAGTTTAGGTT
ATTGCTAAATAGAATAAATGCCCTAAGAAATTAGAGATAAGCTAAGTACT
GAAGGTTCATGCCAGATTATCAAGGTTTTGTAAGTCAGAGTGCAGATCCC
TTGCCAGACAGATTTTTATCTAAGTAAATACAACACGATTAAAGAATTTT
CACAGATGAGTGCCGTAGGAAGCATTTTCATATTAGGGGGGGAGCTGACG
TTTAGTGACACCGCGAGGGCCAACCGGTTTGGCCCGAGGGGAAAAATTTT
GAAAATTTGAGCTCTAGATTGCTTGAAAATGCACTCAAAGCAGACTTATA
AGACAATTATGACAAATTTAAAAATTATTGGGGTTATAGCCCCCTTGCCC
CCCATGCTACGGCACTGCAGATAATATATTAGATACCAAATTGTCAGTTT
TTTAGCATTGCTTAGATTAAAATATAATGGTATGGTCTGGTAGGCTGCTT
ATAATTCAATCACCAAACATAGAATCTAGCCCCCAGGTCCTTCTGAAAAA
TTTAGGTGACCCCTAACATGGTTAGTCCCCCCTAGCCACAGGCTAAAATC
AGGTACCAATCGCTGCTCGACCTTTTAGCGCCCCCCCCCTCAGGCCAGGG
GGGGGGTTCCAGCCACGTTGGTAGTGTGAAGGTTTCGATCACAGACTTGC
ACCACAATGTTGTTCGTTAGTTTGTTAGTTCGTTAGTTACCAGCTTTTCT
TGAGATCGTTCAATTTTTCTGATTTTTTGCTCAACTATAAACTCTCAAAT
GTGACCGAGCCTGATTATCGAAAAAAAAAATTTAGGGTAAATTTCAGCCA
AAAAACGGTTAAAAATAGGGTTTTTTGGAATTGATGAAAAACTGGATCAT
CAAATTTTTCTCATTTTTTGCGTGAAAATAAATGGGGTACCATCATAGGT
AAAAGTTGGCTCGAGCATATTTCGTAAAAGAATTTATTCAGCTCAAAAAG
CAAATCTTTCTCTATAAGAATCACTATTTATAAGCCTAAATAACATTAAC
AGTGATAAAATTTAATCATTTAAGAAAAAGAAAATCTGAGTTAAGCGACT
TGAGTAAAGCGTTTTTTTAAGGAACATTTTTTAAATGTCTTATTTTAACC
CTTTAAGTAGCACGGTCATTTTTTCCTAATTTCTTTTAAAGAAAATCGCT
AGTTTAAACTTTAAAGGCTTTTACCTCCGGATCTAGAAGGAGTTAGAAGA
TGCGTGGACCTGCCTGAATGATAGAATGGTTCCCAGTAGTAAAACTTCAA
ATTAATTCGCTAGAGGACAGAATCACGTAAAGTAGGGTCAAATTTGGAGG
TTCTTGGATCACTCGTTGACCAAAAATGGTAAGAAAAACGGTCAAAATCT
TAAAAAAGTGGATTTTTGGATTTTTTTGACTTTTTGGCTTAAAATCTCGC
TTCGCCCTCCTATATAGCCCATGTCTAGTATACTCGTCATTGCTACTTAA
AGGGTTAATAATTTTGATCAAAACTGATGAATGTAAAGTGTAGAAAACAA
TCTTTCTAATATTTTTAGTTCTAGTCACTCCATACTTGTAAAGTGCTTTT
TTATGACTATCTGGTCCCCCACTCCCTCCCCACTACTCTTCCGTGATTTC
CTGTAATAGTTATCACACGTTACCAAGTACAAAATGGGATATATATTTTT
GAGTTTAGATTTCTCGTCATATTTTAAAATATAGAAAACTCTGAACGAGA
AAAATAGTTTAGAATAATGCAGAGATAATAATTAAACCTTTTTACGTTTA
GATTGTGTTCAACATAATGGAACAGTTATCAATTACAACGATGCCAATTT
GAAGAAAGAAAGGTAAATTTGCAAGAGATGTTTAACCCTTTAATGACCCT
CGTCATCGCGTTCCGTGCCAAAAATACTGATGCCGAGATATCTCGTCATC
GCGTTCCGTTGAATATATGTTTTATCGTTCACTCTTTAGGATAATCTGTT
CCCTCTTTCATTTCTTTAGTTCTTTTCCATTTTCAAAAAACTTCGATGTC
ATATTTGAACGTTTTACTTTCTCAACTAAACATG Coding sequence (CDS) from alignment at sc0000120_pilon:39427..42760- >MSTRG.14420.1.p1 ID=MSTRG.14420.1.p1|Name=MSTRG.14420.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1950bp|location=Sequence derived from alignment at sc0000120_pilon:39427..42760- (Clytia hemisphaerica_ch_hm2_pilon)
ATTGTGTTCAACATAATGGAACAGTTATCAATTACAACGATGCCAATTTG
AAGAAAGAAAGGTAAATGTTGCATGCACTGGATATCAGAGCTCGATATGT
TCTGGATATACTTCACCAAATACTTTTGTTGATATTACAATTTTGTATCC
AGAACCATCAACATAAAAATCCACTCACCAACGATTTTGGAGTTGCTTTA
GCAGAAATTCTGAGAAAGAATCTTGGGAAGTTTAAAAGGCGGAAGGAGAT
ACACAAACATGATTATTTCACTGTGTATTTTTACGATGATCCTGGAACGA
ATCAACAATTAAAAGCAAGAATTCCAATTGAAACTTTGGATATAACAATT
CTGGCGAAACTAATCAATTTGGATTTTATGATATCAGAGATTCGTCAAAG
ATCACGATGTTGCAATCAATGCTCTCAACAGCATAAGAAATGTACATGTG
GAAACATCCAATGTAACAACAGGGCTTGTAAACTGGAACCATGCCAAGAT
ATAAATTGTAATAATGCACAGAATTGTAATTTTATCGCTTTCAAACGATT
TATTGGTTTAGTCCAAGGATTCAGGAACTGTTTCGCTCATTTGAATGATC
ATACATTTTTAAATGATCTGCAAAATGGAGTACAACATCTCCAAGATTTC
CCTAACTTGGCATGGGATGCTTTAATGGGTGAAGTTGTAACTGCATCATT
GGAACCTCTTGATTTTCTAAAATACAAAGCTTTTATAACAGATCACCAAT
TTAAATGTTTTGAAATGGAATTGTACATTGGTGTTTTTAAAGACACTGAT
TTTCTTCTACCTGCTGTGGCAAATAAAGTGAAGCATTTCCAAAACGTTGT
TCTTGGAGCTGAAGGTATTGATGAAAATATTGAGAAGAAGTTCAAATCAA
GTTTGAACGATTTCAAGAACAGCCTGGATACGCTGACTGTCAACTGGGAC
GAGCTAAGAACTCATCTGAACAAAGATTGTGTTCAACATAATGGAACAGT
TATCAATTACAACGATGCCAATTTGAAGAAAGAAAGGTAAATGTTGCATG
CACTGGATATCAGAGCTCGATATGTTCTGGATATACTTCACCAAATACTT
TTGTTGATATTACAATTTTGTATCCAGAACCATCAACATAAAAATCCACT
CACCAACGATTTTGGAGTTGCTTTAGCAGAAATTCTGAGAAAGAATCTTG
GGAAGTTTAAAAGGCGGAAGGAGATACACAAACATGATTATTTCACTGTG
TATTTTTACGATGATCCTGGAACGAATCAACAATTAAAAGCAAGAATTCC
AATTGAAACTTTGGATATAACAATTCTGGCGAAACTAATCAATTTGGATT
TTATGATATCAGAGATTCGTCAAAGATCACGATGTTGCAATCAATGCTCT
CAACAGCATAAGAAATGTACATGTGGAAACATCCAATGTAACAACAGGGC
TTGTAAACTGGAACCATGCCAAGATATAAATTGTAATAATGCACAGAATT
GTAATTTTATCGCTTTCAAACGATTTATTGGTTTAGTCCAAGGATTCAGG
AACTGTTTCGCTCATTTGAATGATCATACATTTTTAAATGATCTGCAAAA
TGGAGTACAACATCTCCAAGATTTCCCTAACTTGGCATGGGATGCTTTAA
TGGGTGAAGTTGTAACTGCATCATTGGAACCTCTTGATTTTCTAAAATAC
AAAGCTTTTATAACAGATCACCAATTTAAATGTTTTGAAATGGAATTGTA
CATTGGTGTTTTTAAAGACACTGATTTTCTTCTACCTGCTGTGGCAAATA
AAGTGAAGCATTTCCAAAACGTTGTTCTTGGAGCTGAAGGTATTGATGAA
AATATTGAGAAGAAGTTCAAATCAAGTTTGAACGATTTCAAGAACAGCCT
GGATACGCTGACTGTCAACTGGGACGAGCTAAGAACTCATCTGAACAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000120_pilon | genome | sc0000120_pilon:39427..42760 - |
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