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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000006_pilon:3423378..3427065- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.1439.1.p1 ID=MSTRG.1439.1.p1|Name=MSTRG.1439.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3688bp|location=Sequence derived from alignment at sc0000006_pilon:3423378..3427065- (Clytia hemisphaerica_ch_hm2_pilon)
CTTTTAATAATGATAAAATAGATTTTATATTGACCTTATAAATAATTGAT
CGATCGAGTTAAGGGAATAATTGATTTTGGCTGTTAGTCATCTGTCAAAT
TTCTGGAGAAGACTTACTGAAAATGTAGCCTTTCAAGATGAAAAGAACAT
GATGATTTTTTAACTTAACTATGCGCTTGTTAACAAAACAATTAATGAAA
ACTCTTCTTAGAGCTTGCTTAAACCATGATTATCGAGAACATACCACAAG
CTAAAAAGAAACTGATCAAAGAAATCAAGAAAATCTTGAAACGTTTCCTG
ATATTTTTCGTTATCGTTCTGTCCAGTCTAGTCCTTGGTGCGTTAATGTT
CTTCTATATTGAGGAATGTTACTTTTACACCGATGACTCTTCAAACTCAA
ACAGCAAGACTAAAGAAGAACTATGCCAGGGATTAACACAATTGAACGTA
ACAGGTACAGTCAAAACCTCAATGGTTGGAGACATATTGCGAAACATGAC
AAAATGGTGTTCAGACAAGGAGACAAATATTTATGACTTTGCTGACAATG
ATGAACCTACTTGTCAATTCAACTACAGGATGTTTTATAAGTGGTCTCAT
TTCACTTTGAGCGTCGCTTTTACCATTGGTAAGTGAGTGGACCTCTGTGG
ACACCGTTTTAAGATTTTTTAAAGATTTTTCATAAAAATCAATAATAGAG
AAGCTTCTATAGAGCCGGTAGGCTGGCTGGTTGAAAATTATTTTTTCCCT
TTTCTAATTTTTATTTTGTCTATATAACACTCTTTAGGACACCGTTTTAA
GATTTTTCATAAAAGTCAATGCGATAGAGAAGCTTCTATAGAGTCGGTAA
GCTGGTTGGTGGACGTGCGACCTTTAACCCAGCGGAAAACAAAAATGCCA
ATCTTGAAGAAAATTTATTTTGTCCCTTTTCTAATTTTCATTTTGTCTAT
ATTTAATAACACTCTTTAGTACTTTGTACTCGTATGAAATCATAGAAGAA
GTCGCTGGATTTGAACTTTTTAAGGCACGAAAAAGTTTGAAGAATTGACG
CTGATAAGAGTGGTTGCATTCTTTGAATGGAAATTGTGAAGCAAATTTTG
TAGCCATTGTATAGACTATTATTAAAGGAATAAATTTTGGCGGACCGAAA
AAGTTTTTTCAGAGGGAATTTAATTTGGCGGATTAAGGACATTTTTGTCC
AAAAAACGCAATTAAAAAAGTAAAAACCTGTTTTAAAGCCCGAAATAGCA
CACATTCGGGGAAATAAATAGAGCAATTTAAATTTGGCGGATGGCGGAAA
ATAGTTTAGGTATAAACTTATTTCTTTTTTTATGATTTTTGTTGGCGACT
AGGCGGAAAATAGTTTAGGTATAAACTTATTTCTTTTTTTATGATTTTTG
TTGGCGACTAGGCGGAAAAAGATTTTGGTGGATTTTGGCCAAATCCGCCA
AATTTTCTTCTCACCAAAACTTCTTCCTTTAATGTAATAAAATAAAATCT
TGCAGGCGGGTGAGAGTGAAAAATATCATTCGCAGAAGAATAATAATTTG
AAAGTTTCACAATCTATTTTACAGGCTACGGAGAAAACGTGGCAAAGTCG
ATGATTGGCAAGGGTTTGACCATAATATACGCACTCATTATGATCCCAAT
CACAACCGCATCTCTGGTGCTCAGTGGACGCCTCATCACTGCATCCATCA
AATACCTAATTGTGGTTTTCGAATCCAATGTTCTCAAACGTACCAAAATC
ATACGTTTCCAACGAAAAGTTGTTGGTATAGAGGTCTTGTTGAATGCAGT
CCTGATTGGATTACAAGCAGTTCTGTACCACAAGACTGTGCTCCATTATA
GAGACTTGTTTGATGCTTTCTATTACATATTCATCAGGTAAGGAGATAAG
CTCTAGTTTAGACGGCTCAGCTTTCGCCCTGCCTAATCTAATTGTAAGAG
TAGGCACAAAGCGGGCACAAAGTGGACGGTTAAATTCTTTGCTGAAACAA
GTGATACTTTTATGGACCTACCTGGTTATGCATTTAACACATATATAATT
GATATCTACGTGAGCGTGACCATTAAACAATCATTCAGAACACATACAGT
GACGATCTATTAAAATTAGTCGTTTGTTTCTTATAAAAAAAACGTTTAGA
AACGAAAATTTCATGCTCTTGAAATATTTTTCAATATTCAAGACTTTGTG
AGCAAAAAAACATCTATCTCATCAAAAAATTGAGTAATTTGGCTAAGAGC
ATTGACGTATGCTTATTAATAGTAATTCTTATAGATAAACATGCGTTTTT
TGAGCCAACAAAATTGTTTTCAAAAAATCTACTTGAGCCATGTTTTACCT
ATGATACCACTTTCATGCAAAAAATCAGAAAAAATTAATGATCCAATTAT
TCCCGTTTATAGCCGTTTTTTGGCCCAAATTTGCCCATTTATTTGAAAGT
CGGGCTCCGTCACATTCGAGGGTTTATAGTTATGCATCTTTGTGCAAAAA
ATCATAAAGAATCAAAGAGCCAATCACGAGGAAAGCTAATAACGAACGAA
CGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACG
AACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAACGAA
CGAAGGTTAATTTATAGGACCTCCACCCCACCGGGGTAGGTCCAAAAAGT
TTGAAAGAAGACATTGATTGCATAGACATCAAAAGAGCGCAATGCATTGA
CTTTAGACAGCACACTTTAAGCACACTTTAAGATCACCTTAATTTCCAAT
TAGAATAGGTAGGGCGAAAAGTGGGCCATCTAAATTAGAGATAAGTTTAA
CAGATAAAAATTGCAGCTTTTAGCCTTTAGGATATAAGGTGATAATTCCA
TTTCGTTCACTTGACTGCTTTCCACTCAAGCTTTTAAAACATCTCTTAGC
AACATTAATTATCGTTTTTTTTGCTCGCTGCCAAAAGTAAAGATCTAGTG
ATAACCCAGTTTCCCACCAAGAAAAACGAGAAAAAATAATGAATTCCTTT
TTCTAGTTTGAGCACAATTGGTTTCGGGGATATCCGTTATGACATGGCTT
ACTTCAGAAGCCTTGGTCGCGCAACACAGTCGGCTTTGGTCATGACATAC
ATCATCCTATTCTACATTAGCTACTCACTGCTTGCTTCGTTTATCAGTAC
TTTGACTTCACTTGGAACCGACAAATCCTTTAAGACATTCAGAACAGTCA
AGATGGTGAGAAGTAACTCAGGGAATATGTTCAAAGTGTTTATGTGAAAG
CACTTCTGGACAATGGAATAATAAAGATATACAAGAAGTACTGGGTTCGT
TGGAAGATACAATTGATTGAGATTATCTTAACAACCTAGTAAAAATTTCT
CTAAGAATGTGGAGAGGCTTTGAAACAAGGATTTTAGTTAGATTAAAGAA
ATACTTCCAACTGAACTTTTGATGCATGCGAAGAAACTTCGTCAAAATCA
AAATCGAGTCATCAAGATTTTAGAATCAAAACTTATCTATTATAAGAGTT
ACAGAAGCGTATAACTATAATACGAATTTATATGACAGTTGTAGCTTTCT
TACAAAAAGATGTAAATATAAGGCTGGACTTAAGATTCTTGGTTTGCAGT
CACCCGACCCTAGATTTTGGAGGTGGGTCGGTCGGTCG Coding sequence (CDS) from alignment at sc0000006_pilon:3423378..3427065- >MSTRG.1439.1.p1 ID=MSTRG.1439.1.p1|Name=MSTRG.1439.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=2871bp|location=Sequence derived from alignment at sc0000006_pilon:3423378..3427065- (Clytia hemisphaerica_ch_hm2_pilon)
TTTGAGCACAATTGGTTTCGGGGATATCCGTTATGACATGGCTTACTTCA
GAAGCCTTGGTCGCGCAACACAGTCGGCTTTGGTCATGACATACATCATC
CTATTCTACATTAGCTACTCACTGCTTGCTTCGTTTATCAGTACTTTGAC
TTCACTTGGAACCGACAAATCCTTTAAGACATTCAGAACAGTCAAGATGG
TGAGAAGTAACTCAGGGAATATGTTCAAAGTGTTTATGTGAGCTACGGAG
AAAACGTGGCAAAGTCGATGATTGGCAAGGGTTTGACCATAATATACGCA
CTCATTATGATCCCAATCACAACCGCATCTCTGGTGCTCAGTGGACGCCT
CATCACTGCATCCATCAAATACCTAATTGTGGTTTTCGAATCCAATGTTC
TCAAACGTACCAAAATCATACGTTTCCAACGAAAAGTTGTTGGTATAGAG
GTCTTGTTGAATGCAGTCCTGATTGGATTACAAGCAGTTCTGTACCACAA
GACTGTGCTCCATTATAGAGACTTGTTTGATGCTTTCTATTACATATTCA
TCAGATGATTATCGAGAACATACCACAAGCTAAAAAGAAACTGATCAAAG
AAATCAAGAAAATCTTGAAACGTTTCCTGATATTTTTCGTTATCGTTCTG
TCCAGTCTAGTCCTTGGTGCGTTAATGTTCTTCTATATTGAGGAATGTTA
CTTTTACACCGATGACTCTTCAAACTCAAACAGCAAGACTAAAGAAGAAC
TATGCCAGGGATTAACACAATTGAACGTAACAGGTACAGTCAAAACCTCA
ATGGTTGGAGACATATTGCGAAACATGACAAAATGGTGTTCAGACAAGGA
GACAAATATTTATGACTTTGCTGACAATGATGAACCTACTTGTCAATTCA
ACTACAGGATGTTTTATAAGTGGTCTCATTTCACTTTGAGCGTCGCTTTT
ACCATTGTTTGAGCACAATTGGTTTCGGGGATATCCGTTATGACATGGCT
TACTTCAGAAGCCTTGGTCGCGCAACACAGTCGGCTTTGGTCATGACATA
CATCATCCTATTCTACATTAGCTACTCACTGCTTGCTTCGTTTATCAGTA
CTTTGACTTCACTTGGAACCGACAAATCCTTTAAGACATTCAGAACAGTC
AAGATGGTGAGAAGTAACTCAGGGAATATGTTCAAAGTGTTTATGTGAGC
TACGGAGAAAACGTGGCAAAGTCGATGATTGGCAAGGGTTTGACCATAAT
ATACGCACTCATTATGATCCCAATCACAACCGCATCTCTGGTGCTCAGTG
GACGCCTCATCACTGCATCCATCAAATACCTAATTGTGGTTTTCGAATCC
AATGTTCTCAAACGTACCAAAATCATACGTTTCCAACGAAAAGTTGTTGG
TATAGAGGTCTTGTTGAATGCAGTCCTGATTGGATTACAAGCAGTTCTGT
ACCACAAGACTGTGCTCCATTATAGAGACTTGTTTGATGCTTTCTATTAC
ATATTCATCAGATGATTATCGAGAACATACCACAAGCTAAAAAGAAACTG
ATCAAAGAAATCAAGAAAATCTTGAAACGTTTCCTGATATTTTTCGTTAT
CGTTCTGTCCAGTCTAGTCCTTGGTGCGTTAATGTTCTTCTATATTGAGG
AATGTTACTTTTACACCGATGACTCTTCAAACTCAAACAGCAAGACTAAA
GAAGAACTATGCCAGGGATTAACACAATTGAACGTAACAGGTACAGTCAA
AACCTCAATGGTTGGAGACATATTGCGAAACATGACAAAATGGTGTTCAG
ACAAGGAGACAAATATTTATGACTTTGCTGACAATGATGAACCTACTTGT
CAATTCAACTACAGGATGTTTTATAAGTGGTCTCATTTCACTTTGAGCGT
CGCTTTTACCATTGTTTGAGCACAATTGGTTTCGGGGATATCCGTTATGA
CATGGCTTACTTCAGAAGCCTTGGTCGCGCAACACAGTCGGCTTTGGTCA
TGACATACATCATCCTATTCTACATTAGCTACTCACTGCTTGCTTCGTTT
ATCAGTACTTTGACTTCACTTGGAACCGACAAATCCTTTAAGACATTCAG
AACAGTCAAGATGGTGAGAAGTAACTCAGGGAATATGTTCAAAGTGTTTA
TGTGAGCTACGGAGAAAACGTGGCAAAGTCGATGATTGGCAAGGGTTTGA
CCATAATATACGCACTCATTATGATCCCAATCACAACCGCATCTCTGGTG
CTCAGTGGACGCCTCATCACTGCATCCATCAAATACCTAATTGTGGTTTT
CGAATCCAATGTTCTCAAACGTACCAAAATCATACGTTTCCAACGAAAAG
TTGTTGGTATAGAGGTCTTGTTGAATGCAGTCCTGATTGGATTACAAGCA
GTTCTGTACCACAAGACTGTGCTCCATTATAGAGACTTGTTTGATGCTTT
CTATTACATATTCATCAGATGATTATCGAGAACATACCACAAGCTAAAAA
GAAACTGATCAAAGAAATCAAGAAAATCTTGAAACGTTTCCTGATATTTT
TCGTTATCGTTCTGTCCAGTCTAGTCCTTGGTGCGTTAATGTTCTTCTAT
ATTGAGGAATGTTACTTTTACACCGATGACTCTTCAAACTCAAACAGCAA
GACTAAAGAAGAACTATGCCAGGGATTAACACAATTGAACGTAACAGGTA
CAGTCAAAACCTCAATGGTTGGAGACATATTGCGAAACATGACAAAATGG
TGTTCAGACAAGGAGACAAATATTTATGACTTTGCTGACAATGATGAACC
TACTTGTCAATTCAACTACAGGATGTTTTATAAGTGGTCTCATTTCACTT
TGAGCGTCGCTTTTACCATTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000006_pilon | genome | sc0000006_pilon:3423378..3427065 - |
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