MSTRG.14389.1.p1 (mRNA) -

Overview
NameMSTRG.14389.1.p1
Unique NameMSTRG.14389.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000119_pilon:724352..728112-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14389.1.p1 ID=MSTRG.14389.1.p1|Name=MSTRG.14389.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3761bp|location=Sequence derived from alignment at sc0000119_pilon:724352..728112- (Clytia hemisphaerica_ch_hm2_pilon)
TTGACATGGCGATGTGGAAAACTATAAAACAAGTTGCTTGCTTTGATTAG
TTTGACTCTCACAATTTTGCTAAAAAAAAAATTCTTTATTTTTCTATACC
TCTTCTTGTCTCTAGAACTAATAATGAATACTTATAATGGACGATTGATA
TTGAAAGTTAAAAAGAGAAGAAGCTCTTTGCCTTTACCTGGCAAGAAGGT
TTGTGCTGAAAAAGAAAATCAATGTGTCACATCTCAACCAAAATCATTAA
AGCGACCAAATCCATTTTCAAAAACCAAGACAGATTGTGAATCCAAAGAT
AAATGCAAGAAATTCATCAATTATGATACCAAAGATATTCATCAAAGCAA
TTTATTAACGGATTTATCAAATCTATCGCAGGACAAGAGAGAACTTCGAT
TGAGTGACTCCAAAGAACCATCCTATGAACTTAAAGATGTTATAAAGGAG
AAAAAAGACGAAGTCACTGAAGATGCAAATAGTGAAAATGTGATCTACGA
AAGTTCACAAGTACCTTTTAACTGGATGTTGAAACAGAAATTGAAATTCT
TTTCTAAGAAACCTTTTCTTTATGACATTAAATCATCACATGAACCAAAA
GCTATTCATAACTTTACAAGTAGTTCCGACCAACCTGATGAACCATTACT
GAATCAACATTTGTACAATTGGATACATCCATCTTTACCTGGCATACCAA
ACTACCCTTTGAAAACAACAGTGCTGGGAGGCTCGTCAAAAGAAGAGAAA
AACTGTATAAACCTTTTTGCAAATAATATGGAACTTCGTGATATTATAAT
GAAGGAATGGAGAAAGAGTTTTCAATCATTATATAACATGTTAAAGACAT
CATATTGTCCTTACTTTTATATTTGTGGTCATCAATTCTCAGTGTTGTTC
AAATCATCTAGTGTTGGACATGATGGAATGTGTGCAGTGCTAGGACCAAC
CACTAAAGGATTGAGAGATTTGCTTTCTCAAGAAGGTTTGTCTAAATTGC
TTATTTTTGGAGGATTTCGACGTGATTGTAGACTGATGCTGATAAATTTC
AGCTTGTAGGTCCCTTTTTTAATCTGGAGGGGTTGTAACCATGCCCTCTA
GCTCTACGTATTTTCGAGGAGGTTACTTGTATTCCAGACGTTTTCTCCAA
CTTAAAAATCAAGCTATTTTTGATAAGTTTCATTCGCAATTTTAGAGCAA
AATAAGGGAGTCCTCTTTTTACAGCTGAAAATACTTTAAAAATTTGATAA
ACGGGGTTGGAAACTATCCGAAAATTGAGGGGGGAGTTTATAAGAACATT
AGTGAGAGTATCTATTCAAATTTGAAAACCTTTGTTTTTACGTTTCAAAT
TCTCCATCTCATAGGTTTGAATTTCGATTTTATTTACACACGTGACGAAG
AAAGTGTGGATGAAATCGAATATGGATTTGAAGATGAAGCCAAACAAAAC
AAAGAATCATCAGATAAAGCCCCATCTTCACTAAACACAAGTTGTGATGA
AGATTTCTTTGATAGTATTGGGTTGAGTCAAAAAGAACATTTCCCTCAGA
TGGAGCAACAACAACGTCGAGCTTTGCGTTCCAAATTGAATTCACTTGAC
AGTCGACCTGAGTCAACAGTACGAATTAAGAATTGTAATGGTTTATTCAA
CTTCCTCTTAAATGCAAATTTCCTGTGTGCAGCATCTGGACCTATGACTG
GAGTTCCGCCAACTCTGTTGTCGCCAGAGCCTTTTGAAAGTGCCACACTG
AACAAATTGAAAGCTAACATTCCACCAAAACAAACCAAGAAAGTCAACAG
TAATACGGTATGTGATGTTTTGACATTGAGAGACCATTTTTTGCTATTTT
TAGTTTTTAGCACTGTTTAAAGCACAAATTTTGGTCTTGGTCAGGTGAAA
AAGAGACATTACCGAATCCGGTCTAATTTGTTTTGTAAAGTCCATCTTTC
CCCTGAGAAGGTAATTTGTTAGATACACAATAGGTTGTAAATTAGATTTT
CTAGTTCTCCTTTTTGTATTCTCAATTTCAAAATTCTTTGAGCGAAGTAC
TAACTAAAAAGTTTACAATATATCTATTTCAAATGATCACCATAGGCGAC
CATGAATAGTCTCGTTGCTTTGTCTTAATTGATATGCACCATTTTTCTAA
GAATTTTCAAAATCTTCTACTATCTCTTGAAATATCTCATCTTCTAAATA
TATCATTTAATCAAAAGAAAATTTCGAAAGATTTTCTAGTGGTGCATATC
TAAGGTTTCGCAAGCGACGACAGGTTTCATTTGTCCTTTACAATGTCAGC
CAGGGATAGTATTGAAATGAGCAATCACTTTGATATTTTAGGTATATACT
GTCGACATCAACGGTACCATGTTACCATGCCAATTTTATCATATCTCGAA
GATACTGACTCAGCATAATGACGTCAACATTCAATGTAAGTCTTTCGAAT
CATTGAATTGTTTATCTGGTCCCATCTTTGGGGACAATCTGATGACGTCG
TCAACAAATGGACTGGACCAAATTGAGAATTGCAAAAATAATTTGTCTCA
TGATTTACAATCATTTTTCAATCAAAAGCCTCTGCGTGTGAAAGACAGTT
CTGAAATTTCTTTTGTTGATGGTATTTTTAAAATCTCTAATTAGTTCTTT
TGATAATGAATAATTTTTTCACAAATTAAATTTGCTCACGAATAAAGATT
CCTTTGGTTTGCCTGGTTGCAACTTTTCCGCCTTTAGACGAAAATTCAAA
TAAATTTTGGTAAAAATGCTCATTTTATCTGAGCTTTTATATAACGAAGA
GCCTTATCTATTTTAATTGGAGAGAACTCTGACCTATTTAGTCTTTAGAT
ACTCAGTAACGAGATTAACACAATACACTTGGAAACATCTTTTCAACTAT
ATACTTACTTATTACTTTTCGAAACATTCTAGAAGGTTCACTAATCGTTA
ATTTTTATAAAATGAATTTTTTGCTTAGCAAATTAGCTTGTAACCTGAAC
TAAAAATAAAAACACTTTTAACATTGTTATTTATAGATCAATATTTAAAA
GATTTTCTGTTCTTCATTTGAGTTTAATTTTCTTTCGATATTGTAACTAA
AGAATCTTTTTGCCTGTTTCTTCGTTTTTTAATAAATCTTAATTTTAGTA
TATTTTTTGGATGATTAACAATATAAATTTTATGAATGTAAATAACGAAC
TTAGAATGAGTAGAAAATAAAGTTGTTTTGAGAAATTTAATTTCACTGAA
TAAGAATTTAACTTTGTCCTTCCAATTGCTTAAAAGCTTCATGAATAAGC
TTCATGGATTGGCTTATTTGTGACACAGTAAACTTGGTATGAACAAAAAC
GCTGTACTATGTTGACCTGGAATGACTAAGTTGGCTTATATTTGACACAG
CCAACTCGGTATGGTCAAAAACGCTGTACCATATTGACTTAAGTGACTAG
ATTGGCTTATTTGTAACACAGTCAACTTGGTATGTATAAAAACGCTGTAC
CATGTTGAACTAAGTGACTAGATTGGCTTAATTGTGACAGTCCAGCGAAG
TGTGTCTGTGAATTCGAGGTCGTCCCACTATCCACTAAAAGTCTCCCACT
ATTAAGGATACCATTTTTGTTTTCTTTTAGCCGTACCATGTTGGTCGAAA
GTATACCAAGTTGACCGAAGAAAATTTTTATCGAAAACAGTCAACTTGGT
ACGGCAAAACGCACGGGATGGAACAGTAACCTGACCAATCAGTACCAAAA
AATGAGCCTGC

Coding sequence (CDS) from alignment at sc0000119_pilon:724352..728112-

>MSTRG.14389.1.p1 ID=MSTRG.14389.1.p1|Name=MSTRG.14389.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6012bp|location=Sequence derived from alignment at sc0000119_pilon:724352..728112- (Clytia hemisphaerica_ch_hm2_pilon)
CCGTACCATGTTGGTCGAAAGTATACCAAGTTGACCGAAGAAAATTTTTA
TCGAAAACAGTCAACTTGGTACGGCAAAACGCACGGGATGGAACAGTAAC
CTGAGTATATACTGTCGACATCAACGGTACCATGTTACCATGCCAATTTT
ATCATATCTCGAAGATACTGACTCAGCATAATGACGTCAACATTCAATGT
TTGAATTTCGATTTTATTTACACACGTGACGAAGAAAGTGTGGATGAAAT
CGAATATGGATTTGAAGATGAAGCCAAACAAAACAAAGAATCATCAGATA
AAGCCCCATCTTCACTAAACACAAGTTGTGATGAAGATTTCTTTGATAGT
ATTGGGTTGAGTCAAAAAGAACATTTCCCTCAGATGGAGCAACAACAACG
TCGAGCTTTGCGTTCCAAATTGAATTCACTTGACAGTCGACCTGAGTCAA
CAGTACGAATTAAGAATTGTAATGGTTTATTCAACTTCCTCTTAAATGCA
AATTTCCTGTGTGCAGCATCTGGACCTATGACTGGAGTTCCGCCAACTCT
GTTGTCGCCAGAGCCTTTTGAAAGTGCCACACTGAACAAATTGAAAGCTA
ACATTCCACCAAAACAAACCAAGAAAGTCAACAGTAATACGATGAATACT
TATAATGGACGATTGATATTGAAAGTTAAAAAGAGAAGAAGCTCTTTGCC
TTTACCTGGCAAGAAGGTTTGTGCTGAAAAAGAAAATCAATGTGTCACAT
CTCAACCAAAATCATTAAAGCGACCAAATCCATTTTCAAAAACCAAGACA
GATTGTGAATCCAAAGATAAATGCAAGAAATTCATCAATTATGATACCAA
AGATATTCATCAAAGCAATTTATTAACGGATTTATCAAATCTATCGCAGG
ACAAGAGAGAACTTCGATTGAGTGACTCCAAAGAACCATCCTATGAACTT
AAAGATGTTATAAAGGAGAAAAAAGACGAAGTCACTGAAGATGCAAATAG
TGAAAATGTGATCTACGAAAGTTCACAAGTACCTTTTAACTGGATGTTGA
AACAGAAATTGAAATTCTTTTCTAAGAAACCTTTTCTTTATGACATTAAA
TCATCACATGAACCAAAAGCTATTCATAACTTTACAAGTAGTTCCGACCA
ACCTGATGAACCATTACTGAATCAACATTTGTACAATTGGATACATCCAT
CTTTACCTGGCATACCAAACTACCCTTTGAAAACAACAGTGCTGGGAGGC
TCGTCAAAAGAAGAGAAAAACTGTATAAACCTTTTTGCAAATAATATGGA
ACTTCGTGATATTATAATGAAGGAATGGAGAAAGAGTTTTCAATCATTAT
ATAACATGTTAAAGACATCATATTGTCCTTACTTTTATATTTGTGGTCAT
CAATTCTCAGTGTTGTTCAAATCATCTAGTGTTGGACATGATGGAATGTG
TGCAGTGCTAGGACCAACCACTAAAGGATTGAGAGATTTGCTTTCTCAAG
AAGCCGTACCATGTTGGTCGAAAGTATACCAAGTTGACCGAAGAAAATTT
TTATCGAAAACAGTCAACTTGGTACGGCAAAACGCACGGGATGGAACAGT
AACCTGAGTATATACTGTCGACATCAACGGTACCATGTTACCATGCCAAT
TTTATCATATCTCGAAGATACTGACTCAGCATAATGACGTCAACATTCAA
TGTTTGAATTTCGATTTTATTTACACACGTGACGAAGAAAGTGTGGATGA
AATCGAATATGGATTTGAAGATGAAGCCAAACAAAACAAAGAATCATCAG
ATAAAGCCCCATCTTCACTAAACACAAGTTGTGATGAAGATTTCTTTGAT
AGTATTGGGTTGAGTCAAAAAGAACATTTCCCTCAGATGGAGCAACAACA
ACGTCGAGCTTTGCGTTCCAAATTGAATTCACTTGACAGTCGACCTGAGT
CAACAGTACGAATTAAGAATTGTAATGGTTTATTCAACTTCCTCTTAAAT
GCAAATTTCCTGTGTGCAGCATCTGGACCTATGACTGGAGTTCCGCCAAC
TCTGTTGTCGCCAGAGCCTTTTGAAAGTGCCACACTGAACAAATTGAAAG
CTAACATTCCACCAAAACAAACCAAGAAAGTCAACAGTAATACGATGAAT
ACTTATAATGGACGATTGATATTGAAAGTTAAAAAGAGAAGAAGCTCTTT
GCCTTTACCTGGCAAGAAGGTTTGTGCTGAAAAAGAAAATCAATGTGTCA
CATCTCAACCAAAATCATTAAAGCGACCAAATCCATTTTCAAAAACCAAG
ACAGATTGTGAATCCAAAGATAAATGCAAGAAATTCATCAATTATGATAC
CAAAGATATTCATCAAAGCAATTTATTAACGGATTTATCAAATCTATCGC
AGGACAAGAGAGAACTTCGATTGAGTGACTCCAAAGAACCATCCTATGAA
CTTAAAGATGTTATAAAGGAGAAAAAAGACGAAGTCACTGAAGATGCAAA
TAGTGAAAATGTGATCTACGAAAGTTCACAAGTACCTTTTAACTGGATGT
TGAAACAGAAATTGAAATTCTTTTCTAAGAAACCTTTTCTTTATGACATT
AAATCATCACATGAACCAAAAGCTATTCATAACTTTACAAGTAGTTCCGA
CCAACCTGATGAACCATTACTGAATCAACATTTGTACAATTGGATACATC
CATCTTTACCTGGCATACCAAACTACCCTTTGAAAACAACAGTGCTGGGA
GGCTCGTCAAAAGAAGAGAAAAACTGTATAAACCTTTTTGCAAATAATAT
GGAACTTCGTGATATTATAATGAAGGAATGGAGAAAGAGTTTTCAATCAT
TATATAACATGTTAAAGACATCATATTGTCCTTACTTTTATATTTGTGGT
CATCAATTCTCAGTGTTGTTCAAATCATCTAGTGTTGGACATGATGGAAT
GTGTGCAGTGCTAGGACCAACCACTAAAGGATTGAGAGATTTGCTTTCTC
AAGAAGCCGTACCATGTTGGTCGAAAGTATACCAAGTTGACCGAAGAAAA
TTTTTATCGAAAACAGTCAACTTGGTACGGCAAAACGCACGGGATGGAAC
AGTAACCTGAGTATATACTGTCGACATCAACGGTACCATGTTACCATGCC
AATTTTATCATATCTCGAAGATACTGACTCAGCATAATGACGTCAACATT
CAATGTTTGAATTTCGATTTTATTTACACACGTGACGAAGAAAGTGTGGA
TGAAATCGAATATGGATTTGAAGATGAAGCCAAACAAAACAAAGAATCAT
CAGATAAAGCCCCATCTTCACTAAACACAAGTTGTGATGAAGATTTCTTT
GATAGTATTGGGTTGAGTCAAAAAGAACATTTCCCTCAGATGGAGCAACA
ACAACGTCGAGCTTTGCGTTCCAAATTGAATTCACTTGACAGTCGACCTG
AGTCAACAGTACGAATTAAGAATTGTAATGGTTTATTCAACTTCCTCTTA
AATGCAAATTTCCTGTGTGCAGCATCTGGACCTATGACTGGAGTTCCGCC
AACTCTGTTGTCGCCAGAGCCTTTTGAAAGTGCCACACTGAACAAATTGA
AAGCTAACATTCCACCAAAACAAACCAAGAAAGTCAACAGTAATACGATG
AATACTTATAATGGACGATTGATATTGAAAGTTAAAAAGAGAAGAAGCTC
TTTGCCTTTACCTGGCAAGAAGGTTTGTGCTGAAAAAGAAAATCAATGTG
TCACATCTCAACCAAAATCATTAAAGCGACCAAATCCATTTTCAAAAACC
AAGACAGATTGTGAATCCAAAGATAAATGCAAGAAATTCATCAATTATGA
TACCAAAGATATTCATCAAAGCAATTTATTAACGGATTTATCAAATCTAT
CGCAGGACAAGAGAGAACTTCGATTGAGTGACTCCAAAGAACCATCCTAT
GAACTTAAAGATGTTATAAAGGAGAAAAAAGACGAAGTCACTGAAGATGC
AAATAGTGAAAATGTGATCTACGAAAGTTCACAAGTACCTTTTAACTGGA
TGTTGAAACAGAAATTGAAATTCTTTTCTAAGAAACCTTTTCTTTATGAC
ATTAAATCATCACATGAACCAAAAGCTATTCATAACTTTACAAGTAGTTC
CGACCAACCTGATGAACCATTACTGAATCAACATTTGTACAATTGGATAC
ATCCATCTTTACCTGGCATACCAAACTACCCTTTGAAAACAACAGTGCTG
GGAGGCTCGTCAAAAGAAGAGAAAAACTGTATAAACCTTTTTGCAAATAA
TATGGAACTTCGTGATATTATAATGAAGGAATGGAGAAAGAGTTTTCAAT
CATTATATAACATGTTAAAGACATCATATTGTCCTTACTTTTATATTTGT
GGTCATCAATTCTCAGTGTTGTTCAAATCATCTAGTGTTGGACATGATGG
AATGTGTGCAGTGCTAGGACCAACCACTAAAGGATTGAGAGATTTGCTTT
CTCAAGAAGCCGTACCATGTTGGTCGAAAGTATACCAAGTTGACCGAAGA
AAATTTTTATCGAAAACAGTCAACTTGGTACGGCAAAACGCACGGGATGG
AACAGTAACCTGAGTATATACTGTCGACATCAACGGTACCATGTTACCAT
GCCAATTTTATCATATCTCGAAGATACTGACTCAGCATAATGACGTCAAC
ATTCAATGTTTGAATTTCGATTTTATTTACACACGTGACGAAGAAAGTGT
GGATGAAATCGAATATGGATTTGAAGATGAAGCCAAACAAAACAAAGAAT
CATCAGATAAAGCCCCATCTTCACTAAACACAAGTTGTGATGAAGATTTC
TTTGATAGTATTGGGTTGAGTCAAAAAGAACATTTCCCTCAGATGGAGCA
ACAACAACGTCGAGCTTTGCGTTCCAAATTGAATTCACTTGACAGTCGAC
CTGAGTCAACAGTACGAATTAAGAATTGTAATGGTTTATTCAACTTCCTC
TTAAATGCAAATTTCCTGTGTGCAGCATCTGGACCTATGACTGGAGTTCC
GCCAACTCTGTTGTCGCCAGAGCCTTTTGAAAGTGCCACACTGAACAAAT
TGAAAGCTAACATTCCACCAAAACAAACCAAGAAAGTCAACAGTAATACG
ATGAATACTTATAATGGACGATTGATATTGAAAGTTAAAAAGAGAAGAAG
CTCTTTGCCTTTACCTGGCAAGAAGGTTTGTGCTGAAAAAGAAAATCAAT
GTGTCACATCTCAACCAAAATCATTAAAGCGACCAAATCCATTTTCAAAA
ACCAAGACAGATTGTGAATCCAAAGATAAATGCAAGAAATTCATCAATTA
TGATACCAAAGATATTCATCAAAGCAATTTATTAACGGATTTATCAAATC
TATCGCAGGACAAGAGAGAACTTCGATTGAGTGACTCCAAAGAACCATCC
TATGAACTTAAAGATGTTATAAAGGAGAAAAAAGACGAAGTCACTGAAGA
TGCAAATAGTGAAAATGTGATCTACGAAAGTTCACAAGTACCTTTTAACT
GGATGTTGAAACAGAAATTGAAATTCTTTTCTAAGAAACCTTTTCTTTAT
GACATTAAATCATCACATGAACCAAAAGCTATTCATAACTTTACAAGTAG
TTCCGACCAACCTGATGAACCATTACTGAATCAACATTTGTACAATTGGA
TACATCCATCTTTACCTGGCATACCAAACTACCCTTTGAAAACAACAGTG
CTGGGAGGCTCGTCAAAAGAAGAGAAAAACTGTATAAACCTTTTTGCAAA
TAATATGGAACTTCGTGATATTATAATGAAGGAATGGAGAAAGAGTTTTC
AATCATTATATAACATGTTAAAGACATCATATTGTCCTTACTTTTATATT
TGTGGTCATCAATTCTCAGTGTTGTTCAAATCATCTAGTGTTGGACATGA
TGGAATGTGTGCAGTGCTAGGACCAACCACTAAAGGATTGAGAGATTTGC
TTTCTCAAGAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14389MSTRG.14389Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14389.1.p1MSTRG.14389.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14389.1.p1.exon4MSTRG.14389.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14389.1.p1.exon3MSTRG.14389.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14389.1.p1.exon2MSTRG.14389.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14389.1.p1.exon1MSTRG.14389.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119_pilongenomesc0000119_pilon:724352..728112 -