MSTRG.14360.4.p1 (mRNA) -

Overview
NameMSTRG.14360.4.p1
Unique NameMSTRG.14360.4.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000119_pilon:412437..414928-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14360.4.p1 ID=MSTRG.14360.4.p1|Name=MSTRG.14360.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2492bp|location=Sequence derived from alignment at sc0000119_pilon:412437..414928- (Clytia hemisphaerica_ch_hm2_pilon)
GTTAATTGTTGTAAAAAAATGTCTTGAGAATATCAAAGCTTGATTCGAAG
ACTATAAAAGTCAAAAGTAAAGTTAACATAGTACATACTTTCAAGAGGGT
GAGAAATCTATACAAGAGACGTTTAGGCGAAGAATCTCTAACCTTTTCAA
CAAAATGGAAAAACTTTTCGTAATGGCTATTTTGCTTATTGCAGTGATTT
CTACCTCAGATGCGAAGGCTATCAGCGATAAAGATTTACGTAAGTTGAAA
AACTTTTCAGTTCTTTACTCTTTCACTCTATGTGACATTCTCAAACTTTA
AAACTTTTTAAACCTGGCTATGATAGCTCTTTTCAGTAAGTTATAGCCGA
AGGCTATTAGATCTGTATCTTCTAATTAAGATTTGAAGCCACTTAAATAT
TATTCAAAGCCCGAAAGGCTTAGAGAGGAATCTTGAAACTCCCATAAGCA
AGAAAAAATGAAGCCCTAAGATTTGCGCCACTTTAGCAATGACTGATTGA
ATCTAGTACTGTCTTAGTTTTCATGCAGCGAATTTTTCTATTTCTCCCCT
TTTTAAATCTTAGACTAAAAAAGATTAAGGTCATTAAGAAGTTTAAGCAG
TCCCAAGTGAACTCTAGGGAACGTGTTTGTGAAAACTATGTTATAGTTTA
CTTTAATTCTCGAGTAATACTCTGCGATTTCTATTTTTTTCTTACAGTGG
ACGCATTAAACGACTTTCTGCATAGAGACATCCAAGGACCCAAGTCGTTC
GTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGA
CGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCA
AGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAA
GGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACACCCA
AGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGT
TCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGA
GACGCCCAAGGATCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACC
CAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCC
AAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAGGTGGAGACGCT
CAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTC
GTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAGGTG
GAGACGCTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCCCAAGGA
CCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGT
CCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCCAAGGTGGAGACG
CCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAG
TCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGG
TGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAG
GACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAGTCGTTCG
TCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGAC
GCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAA
GTCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAG
GTGGAGACGCTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCCCAA
GGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTT
CGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCCAAGGTGGAG
ACGCCCAAGGACCCAAGTCGTTCGGCCAAGGTGGAGACGCCCAAGGACCC
AAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCCA
AGGTGGAGACGCTCAAGGACCCAAGTCGTTTGTTCAAGGTGGAGACGCTC
AAGGACCCAAGTCGTTCGTTCAAGGTGGAGACGCCCAAGGACCCAAGTCG
TTCGTTCAAGGTGGAGACGCCCAAGGACCTAAGTCGTTCGTTCAAGGTGG
AGACGCTCAAGGACCCAAATCGTTCGTTCAAGGTGGAGACGCTCAAGGAC
CCAAATCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAATCGTTCGTC
CAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGA
AAAATCTTTGAATCACAAAGTCAATTCTGCTGAAACGGAAAAAAGGAACG
TTATTGTTAATGTTAATGTTTACTAAACTCAAATTATTTTACTAAAATTT
GTCTCTTTTGAAAAGAATATGGAAATGCTAATGAAACTAAAA

Coding sequence (CDS) from alignment at sc0000119_pilon:412437..414928-

>MSTRG.14360.4.p1 ID=MSTRG.14360.4.p1|Name=MSTRG.14360.4.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1017bp|location=Sequence derived from alignment at sc0000119_pilon:412437..414928- (Clytia hemisphaerica_ch_hm2_pilon)
GTGGAGACGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGAAAAA
TCTTTGAATCACAAAGTCAATTCTGCTGAAACGGAAAAAAGGAACGTTAT
TGTTAATGTTAATGTTTACTAATGGACGCATTAAACGACTTTCTGCATAG
AGACATCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCTCAAGGAC
CCAAGTCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTC
CAAGATGGAAAAACTTTTCGTAATGGCTATTTTGCTTATTGCAGTGATTT
CTACCTCAGATGCGAAGGCTATCAGCGATAAAGATTTACGTGGAGACGCT
CAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGAAAAATCTTTGAATCA
CAAAGTCAATTCTGCTGAAACGGAAAAAAGGAACGTTATTGTTAATGTTA
ATGTTTACTAATGGACGCATTAAACGACTTTCTGCATAGAGACATCCAAG
GACCCAAGTCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTC
GTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTCCAAGATGGAAA
AACTTTTCGTAATGGCTATTTTGCTTATTGCAGTGATTTCTACCTCAGAT
GCGAAGGCTATCAGCGATAAAGATTTACGTGGAGACGCTCAAGGACCCAA
GTCGTTCGTCCAAGGTGGAGACGAAAAATCTTTGAATCACAAAGTCAATT
CTGCTGAAACGGAAAAAAGGAACGTTATTGTTAATGTTAATGTTTACTAA
TGGACGCATTAAACGACTTTCTGCATAGAGACATCCAAGGACCCAAGTCG
TTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGG
AGACGCTCAAGGACCCAAGTCGTTCGTCCAAGATGGAAAAACTTTTCGTA
ATGGCTATTTTGCTTATTGCAGTGATTTCTACCTCAGATGCGAAGGCTAT
CAGCGATAAAGATTTAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14360MSTRG.14360Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14360.4.p1MSTRG.14360.4.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14360.4.p1.exon3MSTRG.14360.4.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14360.4.p1.exon2MSTRG.14360.4.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14360.4.p1.exon1MSTRG.14360.4.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000119_pilongenomesc0000119_pilon:412437..414928 -