MSTRG.14360.3.p1 (mRNA) -

Overview


Name	MSTRG.14360.3.p1
Unique Name	MSTRG.14360.3.p1
Type	mRNA
Organism	Clytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence

The following sequences are available for this feature:

mRNA from alignment at sc0000119_pilon:412437..414928-
coding sequence from alignment at sc0000119_pilon:412437..414928-

mRNA from alignment at sc0000119_pilon:412437..414928-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>MSTRG.14360.3.p1 ID=MSTRG.14360.3.p1|Name=MSTRG.14360.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2492bp|location=Sequence derived from alignment at sc0000119_pilon:412437..414928- (Clytia hemisphaerica_ch_hm2_pilon)
GTTAATTGTTGTAAAAAAATGTCTTGAGAATATCAAAGCTTGATTCGAAG
ACTATAAAAGTCAAAAGTAAAGTTAACATAGTACATACTTTCAAGAGGGT
GAGAAATCTATACAAGAGACGTTTAGGCGAAGAATCTCTAACCTTTTCAA
CAAAATGGAAAAACTTTTCGTAATGGCTATTTTGCTTATTGCAGTGATTT
CTACCTCAGATGCGAAGGCTATCAGCGATAAAGATTTACGTAAGTTGAAA
AACTTTTCAGTTCTTTACTCTTTCACTCTATGTGACATTCTCAAACTTTA
AAACTTTTTAAACCTGGCTATGATAGCTCTTTTCAGTAAGTTATAGCCGA
AGGCTATTAGATCTGTATCTTCTAATTAAGATTTGAAGCCACTTAAATAT
TATTCAAAGCCCGAAAGGCTTAGAGAGGAATCTTGAAACTCCCATAAGCA
AGAAAAAATGAAGCCCTAAGATTTGCGCCACTTTAGCAATGACTGATTGA
ATCTAGTACTGTCTTAGTTTTCATGCAGCGAATTTTTCTATTTCTCCCCT
TTTTAAATCTTAGACTAAAAAAGATTAAGGTCATTAAGAAGTTTAAGCAG
TCCCAAGTGAACTCTAGGGAACGTGTTTGTGAAAACTATGTTATAGTTTA
CTTTAATTCTCGAGTAATACTCTGCGATTTCTATTTTTTTCTTACAGTGG
ACGCATTAAACGACTTTCTGCATAGAGACATCCAAGGACCCAAGTCGTTC
GTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGA
CGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCA
AGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAA
GGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACACCCA
AGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGT
TCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGA
GACGCCCAAGGATCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACC
CAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCC
AAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAGGTGGAGACGCT
CAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTC
GTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAGGTG
GAGACGCTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCCCAAGGA
CCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGT
CCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCCAAGGTGGAGACG
CCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAG
TCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGG
TGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAG
GACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAGTCGTTCG
TCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGAC
GCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAA
GTCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAG
GTGGAGACGCTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCCCAA
GGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTT
CGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCCAAGGTGGAG
ACGCCCAAGGACCCAAGTCGTTCGGCCAAGGTGGAGACGCCCAAGGACCC
AAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCCA
AGGTGGAGACGCTCAAGGACCCAAGTCGTTTGTTCAAGGTGGAGACGCTC
AAGGACCCAAGTCGTTCGTTCAAGGTGGAGACGCCCAAGGACCCAAGTCG
TTCGTTCAAGGTGGAGACGCCCAAGGACCTAAGTCGTTCGTTCAAGGTGG
AGACGCTCAAGGACCCAAATCGTTCGTTCAAGGTGGAGACGCTCAAGGAC
CCAAATCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAATCGTTCGTC
CAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGA
AAAATCTTTGAATCACAAAGTCAATTCTGCTGAAACGGAAAAAAGGAACG
TTATTGTTAATGTTAATGTTTACTAAACTCAAATTATTTTACTAAAATTT
GTCTCTTTTGAAAAGAATATGGAAATGCTAATGAAACTAAAA

Coding sequence (CDS) from alignment at sc0000119_pilon:412437..414928-

>MSTRG.14360.3.p1 ID=MSTRG.14360.3.p1|Name=MSTRG.14360.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=6564bp|location=Sequence derived from alignment at sc0000119_pilon:412437..414928- (Clytia hemisphaerica_ch_hm2_pilon)
GTGGAGACGCTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCTCAA
GGACCCAAGTCGTTCGTCCAAGGTGGAGACGAAAAATCTTTGAGTGGAGA
CGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCA
AGTCGTTCGGCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTTGTTCAA
GGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAGGTGGAGACGCCCA
AGGACCCAAGTCGTTCGTTCAAGGTGGAGACGCCCAAGGACCTAAGTCGT
TCGTTCAAGTGGACGCATTAAACGACTTTCTGCATAGAGACATCCAAGGA
CCCAAGTCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGT
CCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACG
CCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAG
TCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGG
TGGAGACACCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAG
GACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTC
GTCCAAGGTGGAGACGCCCAAGGATCCAAGTCGTTCGTCCAAGGTGGAGA
CGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCA
AGTCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAA
GGTGGAGACGCTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCCCA
AGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGT
TCGTTCAAGGTGGAGACGCTCAAGGACCCAAATCGTTCGTCCAAGGTGGA
GACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACC
CAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCC
AAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCC
CAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTC
GTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTG
GAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGA
CCCAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTC
CAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGC
CCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGT
CGTTCGTTCAAGGTGGAGACGCTCAAGGACCCAAATCGTTCGTCCAAGGT
GGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGG
ACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCG
GCCAAGATGGAAAAACTTTTCGTAATGGCTATTTTGCTTATTGCAGTGAT
TTCTACCTCAGATGCGAAGGCTATCAGCGATAAAGATTTACGTGGAGACG
CTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAG
TCGTTCGTCCAAGGTGGAGACGAAAAATCTTTGAGTGGAGACGCCCAAGG
ACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCG
GCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTTGTTCAAGGTGGAGAC
GCTCAAGGACCCAAGTCGTTCGTTCAAGGTGGAGACGCCCAAGGACCCAA
GTCGTTCGTTCAAGGTGGAGACGCCCAAGGACCTAAGTCGTTCGTTCAAG
TGGACGCATTAAACGACTTTCTGCATAGAGACATCCAAGGACCCAAGTCG
TTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGG
AGACGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGAC
CCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTC
CAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACAC
CCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGT
CGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGT
GGAGACGCCCAAGGATCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGG
ACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCG
TCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAGGTGGAGAC
GCTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAA
GTCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAG
GTGGAGACGCTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCCCAA
GGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTT
CGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCCAAGGTGGAG
ACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCC
AAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCA
AGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCC
AAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAGTCGT
TCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGA
GACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACC
CAAGTCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTC
AAGGTGGAGACGCTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCC
CAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTC
GTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCCAAGATG
GAAAAACTTTTCGTAATGGCTATTTTGCTTATTGCAGTGATTTCTACCTC
AGATGCGAAGGCTATCAGCGATAAAGATTTACGTGGAGACGCTCAAGGAC
CCAAATCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTC
CAAGGTGGAGACGAAAAATCTTTGAGTGGAGACGCCCAAGGACCCAAGTC
GTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCCAAGGTG
GAGACGCTCAAGGACCCAAGTCGTTTGTTCAAGGTGGAGACGCTCAAGGA
CCCAAGTCGTTCGTTCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGT
TCAAGGTGGAGACGCCCAAGGACCTAAGTCGTTCGTTCAAGTGGACGCAT
TAAACGACTTTCTGCATAGAGACATCCAAGGACCCAAGTCGTTCGTCCAA
GGTGGAGACGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCTCA
AGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGT
TCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGA
GACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACACCCAAGGACC
CAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCC
AAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCC
CAAGGATCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTC
GTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTG
GAGACGCTCAAGGACCCAAGTCGTTCGTTCAAGGTGGAGACGCTCAAGGA
CCCAAATCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGT
CCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAGGTGGAGACG
CTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAG
TCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGG
TGGAGACGCCCAAGGACCCAAGTCGTTCGGCCAAGGTGGAGACGCCCAAG
GACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTC
GTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGA
CGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCA
AGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAGTCGTTCGTCCAAG
GTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAA
GGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTT
CGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAGGTGGAG
ACGCTCAAGGACCCAAATCGTTCGTCCAAGGTGGAGACGCCCAAGGACCC
AAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCA
AGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCCAAGATGGAAAAACTT
TTCGTAATGGCTATTTTGCTTATTGCAGTGATTTCTACCTCAGATGCGAA
GGCTATCAGCGATAAAGATTTACGTGGAGACGCTCAAGGACCCAAATCGT
TCGTCCAAGGTGGAGACGCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGA
GACGAAAAATCTTTGAGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCA
AGGTGGAGACGCCCAAGGACCCAAGTCGTTCGGCCAAGGTGGAGACGCTC
AAGGACCCAAGTCGTTTGTTCAAGGTGGAGACGCTCAAGGACCCAAGTCG
TTCGTTCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTTCAAGGTGG
AGACGCCCAAGGACCTAAGTCGTTCGTTCAAGTGGACGCATTAAACGACT
TTCTGCATAGAGACATCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGAC
GCTCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCTCAAGGACCCAA
GTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAG
GTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAA
GGACCCAAGTCGTTCGTCCAAGGTGGAGACACCCAAGGACCCAAGTCGTT
CGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAG
ACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGATCC
AAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCA
AGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCTC
AAGGACCCAAGTCGTTCGTTCAAGGTGGAGACGCTCAAGGACCCAAATCG
TTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGG
AGACGCTCAAGGACCCAAGTCGTTCGTTCAAGGTGGAGACGCTCAAGGAC
CCAAATCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTC
CAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGC
CCAAGGACCCAAGTCGTTCGGCCAAGGTGGAGACGCCCAAGGACCCAAGT
CGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGT
GGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGG
ACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCG
TCCAAGGTGGAGACGCCCAAGGACCCAGTCGTTCGTCCAAGGTGGAGACG
CCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAG
TCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGG
TGGAGACGCTCAAGGACCCAAGTCGTTCGTTCAAGGTGGAGACGCTCAAG
GACCCAAATCGTTCGTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTC
GTCCAAGGTGGAGACGCCCAAGGACCCAAGTCGTTCGTCCAAGGTGGAGA
CGCCCAAGGACCCAAGTCGTTCGGCCAAGATGGAAAAACTTTTCGTAATG
GCTATTTTGCTTATTGCAGTGATTTCTACCTCAGATGCGAAGGCTATCAG
CGATAAAGATTTAC

Gene-mRNA-Prot

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
MSTRG.14360	MSTRG.14360	Clytia hemisphaerica_ch_hm2_pilon	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
MSTRG.14360.3.p1	MSTRG.14360.3.p1-protein	Clytia hemisphaerica_ch_hm2_pilon	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
MSTRG.14360.3.p1.exon4	MSTRG.14360.3.p1.exon4	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.14360.3.p1.exon3	MSTRG.14360.3.p1.exon3	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.14360.3.p1.exon2	MSTRG.14360.3.p1.exon2	Clytia hemisphaerica_ch_hm2_pilon	exon
MSTRG.14360.3.p1.exon1	MSTRG.14360.3.p1.exon1	Clytia hemisphaerica_ch_hm2_pilon	exon

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
sc0000119_pilon	genome	sc0000119_pilon:412437..414928 -

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MSTRG.14360.3.p1 (mRNA) -