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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000119_pilon:174019..177209- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14342.1.p1 ID=MSTRG.14342.1.p1|Name=MSTRG.14342.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3191bp|location=Sequence derived from alignment at sc0000119_pilon:174019..177209- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTAGTGAAAAATAAGACTTATAACTTACAAAAATACAAAAAACAAAAA
GCAATCATGGTATCCTCGGCTGGTGGATTTGCTAATTTGAAACTAAAGAA
AGCGTTGAAGCAAACGACTTTGGACACATTGGACAACCTTGGTTTTGATC
AACCAACACCAGTTCAAGCAACTTGTATACCACTCATTTTATCCAATAAA
GACGTTGTAGCCGAAGCTGTGACCGGGAGCGGAAAAACACTGGCTTTCCT
TATTCCAGGTTCGTTCCAATCATGGTCGATTGAGATAATAATCTATTGAG
AATTAAGCTTATGTCCTCGTTTTTCAAAATTTGGAGTTCGGACGCGAAAG
TCGATTTTGGGCCATTTCTTAAATTTAATCGGGCATTTAAATTTGGCTTG
GGTTTATAGACTTCTAGGTTATATATTTTGAGCCTTATTGAACCATCTTT
AAACGTTTGGATCCTCAGATCTTCAAGTCTTAAGTCTCATGTTAAGGTTC
GTTACCATGTTTTTTTCTTATAAGCAAGTGTACGCCCCTTGGTTAGGCTC
GTGTATGCTTCAAAGTTCTTAAAGCATCCAGGCATAGCTTATGCTTATTA
TATGATTATGAATCATGCTTATGATTCACCTCGAGCCAATTTTGTAGAGG
AATTTCAGAAATTTTTTAAAAATTTGTTCAGATTTTGGGAGCAGTGGAAT
ATAGTTACCCCCTTCGAAAAATGAAAAAACACCCCCTAGAAATTAAATTT
TCCTTAGATTACCCTCTGGAAATGTTTGTCCATCCCCCCACTCTTTAGAT
ATAAAATGTTCGTCCATCCCCCCCACTCTTTAGATATAAAATGTTCGTCC
CTCCCCCCCCCCACTCTTTAGATATAAAATGTTTGTCCACCCCCCCCCCC
CACTCTTTCGATATAAAAATGCTCGTCCATCCCCCCACTCTTTAGATACA
AAATGTTTGTCCATCCCCCCCCCCACTCGTTAGATATAAAATGTTTGTCC
ATCCCCCCCCACTCTTTAGATAAAAATGTTTGTCCATCCCCCCCACCTCT
TTAGATAAAAATGTTTGTCCATCCCCCCCCCACTCTTTAGATATAAAATG
TTTGTCCATCCCCCCCCCACTCTTTAATATAAAATGTTTGTCCATTCCCC
CCACTCTTTAGATATAAAATGCTCGTCCATCCCCCCCACTCTTTAGATAT
AAAATGTTCGTCCATCCCCCCACTCTTTAGATATAAAATGTTTGTCCATC
CCCCCCCCCTCTTTAGATGTAAAATGTTTGTCCATCCCCCCCCCACTCTT
TAGATATAAAATGGAATGGCATATTAAAGCTCCGAAAACGCAACTCGATG
ATAAAGTATCAAATTAACCGTTCACCACAATTTATGTGCGTCATTAATTT
TAAATATTTTTTTCCTTTCCAGTGATCGAGATGTTACAAAACCGCGAAGA
AAAGCTCAAGAAACACGACATCGGAGCTCTTATCCTTTCCCCTACACGAG
AACTCGCTATCCAAATCAACAACGTTCTTAACCCATTCCTTGAGAAAATC
TCTTTAACCAGTAACTTGATTGTCGGTGGAAAATCTAAAGAAGACCCTGT
TAAGAAATTCAACGAAGAAGGAGGTCACATCATAGTCGCAACACCAGGGA
AATTTGCCAAAATGGTGAAAGATACAAAGACGGGGGAACTTTTCCAAAAA
GGTTTGAAAGCGTTGGAAATTTTAATCTTAGACGAGGCGGACCGGTTCTT
CCAACAAGCCAACTTTCGTGAAGACCTACAAAATATCTTAGCCTTTGTAC
CAAAGCAACGCCGCACTAGCCTCTTTTCTGCTACACAAACTACAGAAATC
GAATCGTTCATTCGTGCTGGGCTACGGAACCCAGTCCAAGTTGTTGTTCG
TGAAAAGCGTGCTCAGAATGTAATCAAAAGGACTCCAGATTCTTTAAGCA
ACTTCTATTTCGTTTGCGAAGCTGACTTCAAACTCCAACGACTTGTCGCA
CTACTTCGACAACATCGTGACGAAAAATTCATCATATTTTTCAACACGTG
CGCATGCGTGGATTATTTCACAAAATTATTAGCCATACTTTTGAAGAACA
TTCCAATTTTATCTATCCACGGACAGAAAGTGAAGCGAGCTGAAGTATTC
AATAAATTTCAAGATATAAAACATGGGATTTTGACCTGCACTGATGTCAT
GGCTCGAGGTATTGACATACCAACGGTCGATTGGGTCATCCAGTACGATC
CGCCCTCCAATGTAGAGGCGTTTGTTCATCGGTGTGGGCGGACCGCCCGT
ATGGGAAATATAGGTAAAGCTTTGTTATTGCTACTACCGAGCGAAGTAGC
TTACATCGATTTTGTTAAAATCAATCAAAAAGTTCAAATCGATGAATATG
AGGGACAGAATATCATTGATGACTCTTACAGCATGTCTCACAAGATTCGT
AAAATTGCTTCCAAAGACCGCGAAGTTTATGAAAAAGGCTTAAGAGCTTT
TGTCTCGTTTATCCAAAGTTATATTAAGCATCAATGCAATATCGTCTTAC
AAATGAAGGAGCTAGATATTTGCAAACTTGGTTACGGTTTTGGGTTGTTG
CACTTACCGAAAATGCCGGAGCTGAAGGAGAAAGATTTGAATGGTTTTGA
AACGGTGGATGTTGATACGACACTGATTAAGTATCAGGATAAGGTGAGAG
AGAAAGCCCGTCTCGAGAGGGTTGAAAAGGAGACGGAAGCTGCAAAGGAG
AAGGCTATCGAGAAAGCGAAATTCAAGGCGAGCCAACAGACCCGGAAAAG
TGATAGCTGGTCTAGACAAAAAGAAAAGAAGATGAAAAAAAATGAACGGA
AAGAGAAACAGACTTTGAAAAGGAAATTGAAGGACGATGGCGATGACGAT
GTTGATGATGTTGATGATTTGATGAAAGAAGGACGTTTATTGAAAAAGTT
GAAGAAAGGGAAAATCACTGAAAAACAATATCAAGAGCGAACGAATGAAG
AGGAATTGTTGTCTGATTCTTAGAGACTTTTTAGATGAAATTTGTTTTTT
TTTAATAGAATTTTAGCTTGCTGTACTTTTATGTGATTGAACAACTTATT
ACTTCGAATACTTTAGGCATACAAACTTTTGCGAGCAGAAATATTCGCGA
GGACGAAAAATCATGAAATTCACGACATTTACTTTTGCGAA Coding sequence (CDS) from alignment at sc0000119_pilon:174019..177209- >MSTRG.14342.1.p1 ID=MSTRG.14342.1.p1|Name=MSTRG.14342.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3606bp|location=Sequence derived from alignment at sc0000119_pilon:174019..177209- (Clytia hemisphaerica_ch_hm2_pilon)
TGATCGAGATGTTACAAAACCGCGAAGAAAAGCTCAAGAAACACGACATC
GGAGCTCTTATCCTTTCCCCTACACGAGAACTCGCTATCCAAATCAACAA
CGTTCTTAACCCATTCCTTGAGAAAATCTCTTTAACCAGTAACTTGATTG
TCGGTGGAAAATCTAAAGAAGACCCTGTTAAGAAATTCAACGAAGAAGGA
GGTCACATCATAGTCGCAACACCAGGGAAATTTGCCAAAATGGTGAAAGA
TACAAAGACGGGGGAACTTTTCCAAAAAGGTTTGAAAGCGTTGGAAATTT
TAATCTTAGACGAGGCGGACCGGTTCTTCCAACAAGCCAACTTTCGTGAA
GACCTACAAAATATCTTAGCCTTTGTACCAAAGCAACGCCGCACTAGCCT
CTTTTCTGCTACACAAACTACAGAAATCGAATCGTTCATTCGTGCTGGGC
TACGGAACCCAGTCCAAGTTGTTGTTCGTGAAAAGCGTGCTCAGAATGTA
ATCAAAAGGACTCCAGATTCTTTAAGCAACTTCTATTTCGTTTGCGAAGC
TGACTTCAAACTCCAACGACTTGTCGCACTACTTCGACAACATCGTGACG
AAAAATTCATCATATTTTTCAACACGTGCGCATGCGTGGATTATTTCACA
AAATTATTAGCCATACTTTTGAAGAACATTCCAATTTTATCTATCCACGG
ACAGAAAGTGAAGCGAGCTGAAGTATTCAATAAATTTCAAGATATAAAAC
ATGGGATTTTGACCTGCACTGATGTCATGGCTCGAGGTATTGACATACCA
ACGGTCGATTGGGTCATCCAGTACGATCCGCCCTCCAATGTAGAGGCGTT
TGTTCATCGGTGTGGGCGGACCGCCCGTATGGGAAATATAGGTAAAGCTT
TGTTATTGCTACTACCGAGCGAAGTAGCTTACATCGATTTTGTTAAAATC
AATCAAAAAGTTCAAATCGATGAATATGAGGGACAGAATATCATTGATGA
CTCTTACAGCATGTCTCACAAGATTCGTAAAATTGCTTCCAAAGACCGCG
AAGTTTATGAAAAAGGCTTAAGAGCTTTTGTCTCGTTTATCCAAAGTTAT
ATTAAGCATCAATGCAATATCGTCTTACAAATGAAGGAGCTAGATATTTG
CAAACTTGGTTACGGTTTTGGGTTGTTGCACTTACCGAAAATGCCGGAGC
TGAAGGAGAAAGATTTGAATGGTTTTGAAACGGTGGATGTTGATACGACA
CTGATTAAGTATCAGGATAAGGTGAGAGAGAAAGCCCGTCTCGAGAGGGT
TGAAAAGGAGACGGAAGCTGCAAAGGAGAAGGCTATCGAGAAAGCGAAAT
TCAAGGCGAGCCAACAGACCCGGAAAAGTGATAGCTGGTCTAGACAAAAA
GAAAAGAAGATGAAAAAAAATGAACGGAAAGAGAAACAGACTTTGAAAAG
GAAATTGAAGGACGATGGCGATGACGATGTTGATGATGTTGATGATTTGA
TGAAAGAAGGACGTTTATTGAAAAAGTTGAAGAAAGGGAAAATCACTGAA
AAACAATATCAAGAGCGAACGAATGAAGAGGAATTGTTGTCTGATTCTTA
GATGGTATCCTCGGCTGGTGGATTTGCTAATTTGAAACTAAAGAAAGCGT
TGAAGCAAACGACTTTGGACACATTGGACAACCTTGGTTTTGATCAACCA
ACACCAGTTCAAGCAACTTGTATACCACTCATTTTATCCAATAAAGACGT
TGTAGCCGAAGCTGTGACCGGGAGCGGAAAAACACTGGCTTTCCTTATTC
CAGTGATCGAGATGTTACAAAACCGCGAAGAAAAGCTCAAGAAACACGAC
ATCGGAGCTCTTATCCTTTCCCCTACACGAGAACTCGCTATCCAAATCAA
CAACGTTCTTAACCCATTCCTTGAGAAAATCTCTTTAACCAGTAACTTGA
TTGTCGGTGGAAAATCTAAAGAAGACCCTGTTAAGAAATTCAACGAAGAA
GGAGGTCACATCATAGTCGCAACACCAGGGAAATTTGCCAAAATGGTGAA
AGATACAAAGACGGGGGAACTTTTCCAAAAAGGTTTGAAAGCGTTGGAAA
TTTTAATCTTAGACGAGGCGGACCGGTTCTTCCAACAAGCCAACTTTCGT
GAAGACCTACAAAATATCTTAGCCTTTGTACCAAAGCAACGCCGCACTAG
CCTCTTTTCTGCTACACAAACTACAGAAATCGAATCGTTCATTCGTGCTG
GGCTACGGAACCCAGTCCAAGTTGTTGTTCGTGAAAAGCGTGCTCAGAAT
GTAATCAAAAGGACTCCAGATTCTTTAAGCAACTTCTATTTCGTTTGCGA
AGCTGACTTCAAACTCCAACGACTTGTCGCACTACTTCGACAACATCGTG
ACGAAAAATTCATCATATTTTTCAACACGTGCGCATGCGTGGATTATTTC
ACAAAATTATTAGCCATACTTTTGAAGAACATTCCAATTTTATCTATCCA
CGGACAGAAAGTGAAGCGAGCTGAAGTATTCAATAAATTTCAAGATATAA
AACATGGGATTTTGACCTGCACTGATGTCATGGCTCGAGGTATTGACATA
CCAACGGTCGATTGGGTCATCCAGTACGATCCGCCCTCCAATGTAGAGGC
GTTTGTTCATCGGTGTGGGCGGACCGCCCGTATGGGAAATATAGGTAAAG
CTTTGTTATTGCTACTACCGAGCGAAGTAGCTTACATCGATTTTGTTAAA
ATCAATCAAAAAGTTCAAATCGATGAATATGAGGGACAGAATATCATTGA
TGACTCTTACAGCATGTCTCACAAGATTCGTAAAATTGCTTCCAAAGACC
GCGAAGTTTATGAAAAAGGCTTAAGAGCTTTTGTCTCGTTTATCCAAAGT
TATATTAAGCATCAATGCAATATCGTCTTACAAATGAAGGAGCTAGATAT
TTGCAAACTTGGTTACGGTTTTGGGTTGTTGCACTTACCGAAAATGCCGG
AGCTGAAGGAGAAAGATTTGAATGGTTTTGAAACGGTGGATGTTGATACG
ACACTGATTAAGTATCAGGATAAGGTGAGAGAGAAAGCCCGTCTCGAGAG
GGTTGAAAAGGAGACGGAAGCTGCAAAGGAGAAGGCTATCGAGAAAGCGA
AATTCAAGGCGAGCCAACAGACCCGGAAAAGTGATAGCTGGTCTAGACAA
AAAGAAAAGAAGATGAAAAAAAATGAACGGAAAGAGAAACAGACTTTGAA
AAGGAAATTGAAGGACGATGGCGATGACGATGTTGATGATGTTGATGATT
TGATGAAAGAAGGACGTTTATTGAAAAAGTTGAAGAAAGGGAAAATCACT
GAAAAACAATATCAAGAGCGAACGAATGAAGAGGAATTGTTGTCTGATTC
TTAGATGGTATCCTCGGCTGGTGGATTTGCTAATTTGAAACTAAAGAAAG
CGTTGAAGCAAACGACTTTGGACACATTGGACAACCTTGGTTTTGATCAA
CCAACACCAGTTCAAGCAACTTGTATACCACTCATTTTATCCAATAAAGA
CGTTGTAGCCGAAGCTGTGACCGGGAGCGGAAAAACACTGGCTTTCCTTA
TTCCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000119_pilon | genome | sc0000119_pilon:174019..177209 - |
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