MSTRG.14325.1.p1 (mRNA) -

Overview
NameMSTRG.14325.1.p1
Unique NameMSTRG.14325.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000118_pilon:967832..972120-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14325.1.p1 ID=MSTRG.14325.1.p1|Name=MSTRG.14325.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4289bp|location=Sequence derived from alignment at sc0000118_pilon:967832..972120- (Clytia hemisphaerica_ch_hm2_pilon)
TTTGTAGGTTATCACTCACAAACACATGATATCAGTGACGATTCGTTAAT
TGGATACGCCTTTGAAGATCACGATGCCGCCCATCAACACCAGGTACCAA
ACGCCCCTGTTTTACTACCTCTCCCTCGTCGCTGCCCTAACTCTCACCTT
TTTCGGTCTGTTTGAATAAAGTAATACATTCCAGTATGGATATAAAATCT
TTTGCTGTCAGATTCAAAAAGGTCAGCTTGATGGCTCATTGGCCAATATA
TCCAATTTCATCTCCAATACGCGTACCCCGACTGGAGCATTTTAGCACAT
TGCTTAAAACATAATTGGGAATATTCTGGAGCAACAAACACCCTGAGAAA
AGCTAACTAATATATTTGATATTATTAGAACTGCTTTCCTGCAGGCGACC
GGATAGTGCAAAGGTAGAGTAGCCGGCTACGGTGCACAAGGTTGTGTGTT
CTATCCCACGCCGGGTCATATTTCATACAAAGATATGCTTTATCTCTGCT
TGATGCTCAGCATAAGTGGACCAGTCCAGAGTGAAGTAATGGCGCCTTCG
GGTGGGTAGCTATTGAAAGAGGAGCCTTCGGGTCCACTCCGACTACCGTT
GCAGACTTACTTAGTTTTAAGCAAACAAATGATTCCTTTCAATTCAGATT
GGTTTCGTGAACGCTGGTGTTTCAGTGTTAAACACAGCAAGTCATATTCT
TCTGAACAAACGAATCAAGAAGCTTGAAAATCATTGGGATAGACGAATCA
GGGAGCTGACAAGAGCAAATACCAATTTCAAACGTTGTGAGTTTTCTTTA
GAAAAAGTAATAAAACTGTTTTTATTACATGTTAACGACCAACCAAATCA
AATAAGAGCTTGCAAAAACTCCAGCTTGTCCCTGCTATTCTGCGACGGTG
ACGGTTAGCATCTGATTTGCTGAGGACGACAGTAAATCAGCACTTTTTTA
CTGTCCTTGATATTTTTTTTGGGTCAAAACTGTGGGCTATTCCAAATTGC
TTCAGTCACTCCGCCTTCTTAAAAAGTGCTTACTAATGTTTTGTTATAAG
AGATTTTTCGTCACCGTGTCCCGACTTGTTTTCTTTTCAGGTAAGCTTTG
TTTGCTATGATATAGAGTACGAAGCTTGGGCTCATTGGGGAAGTAAACTT
TCAAATACCTTATTGGTAATAATAACGACGACAATAATTCGTCGGTAAAA
ATTTACGTCAGCAAGGCGATTTTTTCTTCACTATTGCGAACGATTTCTTT
ACTGATATTGTACTTAATTAGTGTGTCGGTTCGTCAGTGCATCGTCTATT
TTAACGATCTAGAATTGTCAATAAAAGTGAACCTTAAGGCAGTACTTCCA
ATGGCATCTTGCTAGCCTATGTCGGTTTAAATTGACATCGGCACGGAAGT
GGCAGAAATATAAGGGGTTAGACAGGTTATTAGGCAATAGATGTTATTCT
GATGTCTTATCATAAACTTTTAAAAGGGTTTTCCCCTTAAGTTCGATAAG
TGGGGAGAGTACTTTCGGGTCTTGTTTTTGTTTTCAAAAGCCTCAAAAAA
TTGCAATGCTGCCATATACTTTTTATAGAATTCAGTTTATGCAATACATA
TAACTTATTATGTTTTTTAATCTTTCTTGACATTCGTGAGAGTTTATCCA
AATAAATGTCAGACACTGACATCATCATCTTTGCCAATTTTACTGGGAAT
TTTGATGATATATAATATGCGAGTGTTTAGTGAGTCATATTCACGGTCAT
ATTTCCATTTCATCATGGATATTTTAACATTTTTATAAAAAATCATCCTA
AAATGTTTGTAACAGTTACTTCTAGGTTAGGGTCCAAACCTTACCTAAAC
TTAATTGCTTGCTGAGTACAGATTTAGAAATCAGACTATTTGTCTACTTG
TCCACTACATATTTGGGCAAAAGAAAGTATTATCTTTTTTTTATGGCTCT
GCTTGAAATTGCCCTAATTTGTTGACAGCCGATGGGTTTTTTTACTCTTA
AAGATCACTATTAAGTATGCGTTGGTCGAGTTTACAGTATCGTATTTCTC
TTGTCTGTGCATAGGGTATTTACAATATTTTGTTTCTCGGAAGATTGACT
GACCAATACACTGTATGTTGACACTTGTCTTTTTTTTGGTGTCTTATTCC
TTTCAGTCTTTTATGATCATTCAAAACCTAATCATTTACATCTTATCGAA
TGACAACCATAGTCAAACTCCCACTCAGATAATAAATATTGATAAAACAT
GAGTCTCAAGAGGTTTCAAATTTTTCAGCCCGCGATATTTGCATTGACAA
AATCGTCAGAATTTGATTATGAAACTATACATCTCAGCGCTTCCTTTGCC
CAACGCCACTCCTCATTTGAAAGCTAATAATATTTTAATGCCCGTCAAAA
AATCCCGCAATCGACCGAGAATCTTATTTTTGTTGGCAAAAATGTCGTCA
ATAAGCGACTTTTTTATCGTCTTATTTCGCCGACATTGTAAAAAATAACA
TTTCTTTTTCTACAGGTTTCGTGACGTCCGGATTAACCTTCTTCTTCTTA
TCACTTTTGACGGGATTCTTCTTGTGGCAACTACTGACACCCGGAACAGC
ATACCGGTACTGGAAATGCCGGGATGGTTCTATACCGGATCATCAAGCAA
CATTTAAATATAATCCTGACCGATTCTCTTTTTCGGTATGTGTTGTAAGA
AGCATTTTCATTTGGGGGGTTGAAGTTTAGTGACACCGCGAGGGCAAACC
ATGGTTTGGCCCGAGGGGGGGAATTTTGAAAGTTTGAGCTCTATATTGCT
TGAAAATGCACTCAAAGCAAAATCCTTTAGAGAAAAACAACATAAAAACT
TTGCATTTTACAAAATAAACATATTTGCAAAAATTATTGGGGGCATAGCT
CCCCTTGCCCCCCCTCCCCAGTTGCTACGGCACTGTGATTAAAAAAGTCG
ATACTTCAAATTATGATAGACTTTTTCATGGAATCTGAGGTCCCGTATAA
ACGTCTTCACCGGACATTTATTAATTTTTGAACCCCACCCCTTTTATTTG
GTACCCGATACTATTCTGGACCTTTGAAAAAATGCTTTTGTATGAAAGTT
AAGCCTGCGGCAATTTTATTAATACTTCTGCGTTTTCTTCACTTTAAGTA
TCTTGTCGGTTGTGTTTGGGCTAATTTTCCTCTTTTCTATGTTTTGTAGC
TTGAAGATGTGAATGGGATCGAATTTGATTTCAAGAAGCTGATGAAGAAG
ACAGAACATTCACAATACTCAATGATGGATTCTAAAGGTTTGTTTACATG
TCAGTTTACCTGTTTATAAATGACACTTTTCGATCTGAAAGAAAGGTCTA
AAAGAGGTTAACAAATTGATATTTTACGTGGATAGCCTGTTATTCTAGGC
ATTTTAGACAGTTTTTCGATTGGCCGACTATCTCAGTTATCTATGACCTG
AACTGATACATATAGCCCCTACTCTTGTCTCCAGAATAGACGGGGGGGGG
GGGGTCCGAATAAGCAGGGGGGTAGGAAAATTTTCTAAATTCTAATAAGT
GGGGGGGGATGGAATAAGAGGGGGGGGGGTAATTTGAAGACATAGTTTTT
TTAACTGATATCAATTTCAACAACAAAAAAGCAACTTTAACAAATAAACA
CGTAAAATAAGAACCAATACTAACGGAGAGGAACATTTTCACAAGTTTAA
GGTCTTTCTACACTGTAATAAAATATTGAATTACTCGAATTTAATTACAG
GGAGGTCTTAATAAGGGTGGGGGGATGGATTTTTTTTTCGATTAACAATT
AGCGGGGGGACGTCTATTCGGGAGACAAGAGTAAGCCCCCCCACCCCAAT
ATCGCCAGCGCTGAAAGGCTGAACAAAGGTTCTACACTAACATCGGCGAA
AGTTTTAACTTTTTTTAGCTTTTTTTGGCAATTAAGGTTACATTTTTATG
TTTTAAAACATGCACGATTTCCTGATTCATTTTCATTCTTCTAATGTATA
GCATACCCTGGCGTTCGTTATTACCTGAATGTAGACGTTTGTGCGTACGG
CGGGACGCGTTCGACACAAGATATAACAACAGGTCAGAAAGTGGTATATG
GCCCTGATGTATTCGCAGTTGACAAAGATTGCAAAGAAGCTTTTTATTTT
GTCGAGTGGGAATTTAAATGGCGACAAATTTATTAGTCCAGATTTGTCAA
TTTCACGCATACCATTCACAACCCGTTGAATTTGACCTGTGTTTCTTAAC
TTTATTCTAAATATTAAGCTATATAAGTAAGTAAGAAAG

Coding sequence (CDS) from alignment at sc0000118_pilon:967832..972120-

>MSTRG.14325.1.p1 ID=MSTRG.14325.1.p1|Name=MSTRG.14325.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3375bp|location=Sequence derived from alignment at sc0000118_pilon:967832..972120- (Clytia hemisphaerica_ch_hm2_pilon)
CATACCCTGGCGTTCGTTATTACCTGAATGTAGACGTTTGTGCGTACGGC
GGGACGCGTTCGACACAAGATATAACAACAGGTCAGAAAGTGGTATATGG
CCCTGATGTATTCGCAGTTGACAAAGATTGCAAAGAAGCTTTTTATTTTG
TCGAGTGGGAATTTAAATGGCGACAAATTTATTAGCTTGAAGATGTGAAT
GGGATCGAATTTGATTTCAAGAAGCTGATGAAGAAGACAGAACATTCACA
ATACTCAATGATGGATTCTAAAGGTTTCGTGACGTCCGGATTAACCTTCT
TCTTCTTATCACTTTTGACGGGATTCTTCTTGTGGCAACTACTGACACCC
GGAACAGCATACCGGTACTGGAAATGCCGGGATGGTTCTATACCGGATCA
TCAAGCAACATTTAAATATAATCCTGACCGATTCTCTTTTTCGATTGGTT
TCGTGAACGCTGGTGTTTCAGTGTTAAACACAGCAAGTCATATTCTTCTG
AACAAACGAATCAAGAAGCTTGAAAATCATTGGGATAGACGAATCAGGGA
GCTGACAAGAGCAAATACCAATTTCAAACGTTTTTGTAGGTTATCACTCA
CAAACACATGATATCAGTGACGATTCGTTAATTGGATACGCCTTTGAAGA
TCACGATGCCGCCCATCAACACCAGCATACCCTGGCGTTCGTTATTACCT
GAATGTAGACGTTTGTGCGTACGGCGGGACGCGTTCGACACAAGATATAA
CAACAGGTCAGAAAGTGGTATATGGCCCTGATGTATTCGCAGTTGACAAA
GATTGCAAAGAAGCTTTTTATTTTGTCGAGTGGGAATTTAAATGGCGACA
AATTTATTAGCTTGAAGATGTGAATGGGATCGAATTTGATTTCAAGAAGC
TGATGAAGAAGACAGAACATTCACAATACTCAATGATGGATTCTAAAGGT
TTCGTGACGTCCGGATTAACCTTCTTCTTCTTATCACTTTTGACGGGATT
CTTCTTGTGGCAACTACTGACACCCGGAACAGCATACCGGTACTGGAAAT
GCCGGGATGGTTCTATACCGGATCATCAAGCAACATTTAAATATAATCCT
GACCGATTCTCTTTTTCGATTGGTTTCGTGAACGCTGGTGTTTCAGTGTT
AAACACAGCAAGTCATATTCTTCTGAACAAACGAATCAAGAAGCTTGAAA
ATCATTGGGATAGACGAATCAGGGAGCTGACAAGAGCAAATACCAATTTC
AAACGTTTTTGTAGGTTATCACTCACAAACACATGATATCAGTGACGATT
CGTTAATTGGATACGCCTTTGAAGATCACGATGCCGCCCATCAACACCAG
CATACCCTGGCGTTCGTTATTACCTGAATGTAGACGTTTGTGCGTACGGC
GGGACGCGTTCGACACAAGATATAACAACAGGTCAGAAAGTGGTATATGG
CCCTGATGTATTCGCAGTTGACAAAGATTGCAAAGAAGCTTTTTATTTTG
TCGAGTGGGAATTTAAATGGCGACAAATTTATTAGCTTGAAGATGTGAAT
GGGATCGAATTTGATTTCAAGAAGCTGATGAAGAAGACAGAACATTCACA
ATACTCAATGATGGATTCTAAAGGTTTCGTGACGTCCGGATTAACCTTCT
TCTTCTTATCACTTTTGACGGGATTCTTCTTGTGGCAACTACTGACACCC
GGAACAGCATACCGGTACTGGAAATGCCGGGATGGTTCTATACCGGATCA
TCAAGCAACATTTAAATATAATCCTGACCGATTCTCTTTTTCGATTGGTT
TCGTGAACGCTGGTGTTTCAGTGTTAAACACAGCAAGTCATATTCTTCTG
AACAAACGAATCAAGAAGCTTGAAAATCATTGGGATAGACGAATCAGGGA
GCTGACAAGAGCAAATACCAATTTCAAACGTTTTTGTAGGTTATCACTCA
CAAACACATGATATCAGTGACGATTCGTTAATTGGATACGCCTTTGAAGA
TCACGATGCCGCCCATCAACACCAGCATACCCTGGCGTTCGTTATTACCT
GAATGTAGACGTTTGTGCGTACGGCGGGACGCGTTCGACACAAGATATAA
CAACAGGTCAGAAAGTGGTATATGGCCCTGATGTATTCGCAGTTGACAAA
GATTGCAAAGAAGCTTTTTATTTTGTCGAGTGGGAATTTAAATGGCGACA
AATTTATTAGCTTGAAGATGTGAATGGGATCGAATTTGATTTCAAGAAGC
TGATGAAGAAGACAGAACATTCACAATACTCAATGATGGATTCTAAAGGT
TTCGTGACGTCCGGATTAACCTTCTTCTTCTTATCACTTTTGACGGGATT
CTTCTTGTGGCAACTACTGACACCCGGAACAGCATACCGGTACTGGAAAT
GCCGGGATGGTTCTATACCGGATCATCAAGCAACATTTAAATATAATCCT
GACCGATTCTCTTTTTCGATTGGTTTCGTGAACGCTGGTGTTTCAGTGTT
AAACACAGCAAGTCATATTCTTCTGAACAAACGAATCAAGAAGCTTGAAA
ATCATTGGGATAGACGAATCAGGGAGCTGACAAGAGCAAATACCAATTTC
AAACGTTTTTGTAGGTTATCACTCACAAACACATGATATCAGTGACGATT
CGTTAATTGGATACGCCTTTGAAGATCACGATGCCGCCCATCAACACCAG
CATACCCTGGCGTTCGTTATTACCTGAATGTAGACGTTTGTGCGTACGGC
GGGACGCGTTCGACACAAGATATAACAACAGGTCAGAAAGTGGTATATGG
CCCTGATGTATTCGCAGTTGACAAAGATTGCAAAGAAGCTTTTTATTTTG
TCGAGTGGGAATTTAAATGGCGACAAATTTATTAGCTTGAAGATGTGAAT
GGGATCGAATTTGATTTCAAGAAGCTGATGAAGAAGACAGAACATTCACA
ATACTCAATGATGGATTCTAAAGGTTTCGTGACGTCCGGATTAACCTTCT
TCTTCTTATCACTTTTGACGGGATTCTTCTTGTGGCAACTACTGACACCC
GGAACAGCATACCGGTACTGGAAATGCCGGGATGGTTCTATACCGGATCA
TCAAGCAACATTTAAATATAATCCTGACCGATTCTCTTTTTCGATTGGTT
TCGTGAACGCTGGTGTTTCAGTGTTAAACACAGCAAGTCATATTCTTCTG
AACAAACGAATCAAGAAGCTTGAAAATCATTGGGATAGACGAATCAGGGA
GCTGACAAGAGCAAATACCAATTTCAAACGTTTTTGTAGGTTATCACTCA
CAAACACATGATATCAGTGACGATTCGTTAATTGGATACGCCTTTGAAGA
TCACGATGCCGCCCATCAACACCAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14325MSTRG.14325Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14325.1.p1MSTRG.14325.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14325.1.p1.exon5MSTRG.14325.1.p1.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14325.1.p1.exon4MSTRG.14325.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14325.1.p1.exon3MSTRG.14325.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14325.1.p1.exon2MSTRG.14325.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14325.1.p1.exon1MSTRG.14325.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000118_pilongenomesc0000118_pilon:967832..972120 -