MSTRG.14309.1.p1 (mRNA) -

Overview
NameMSTRG.14309.1.p1
Unique NameMSTRG.14309.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000118_pilon:608211..609585-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14309.1.p1 ID=MSTRG.14309.1.p1|Name=MSTRG.14309.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=1375bp|location=Sequence derived from alignment at sc0000118_pilon:608211..609585- (Clytia hemisphaerica_ch_hm2_pilon)
CTCAAAATGTTTCAGCATTTGTTGCAATCATTAGTGAACCATTTGGAAAA
AAGTTACATTTCAATTTTTATAAAGATTATAGCAAAAAGGATAGGATTTC
CTTTTGATGTCCCAATAGAGTTATATTTCTATATTTCAATTATGATAATA
TTTTACTGTATGTTACTGAAGATAAATGACGAAAATGAGAATGGATATGT
TGATGTAGATGGTTTGATCTTTTTGAGCATATTTCTGATATTATTGTAAG
TGAAATTCTCAAGTAAAATTGGCCGCAGTTAATTTTGGCTAGTAGAAAAT
ATCCTAAAATACTTAAAATTGGCGAGGAACATTTTTCGGCGAGGAACATT
TTTCGGCGAGGAAAATTTTTCGGCGAGGAATATTTTTCGGTGAGGCAGCA
ACTTTTTTGAGCAGTATTTTTGGCGAAAGGCATTGTTAATTGTTTCTTTG
TTTTCTAAAAATGAAGGTTTTAGTCAAAATTTAGAGGCTATCAGGTTGCA
ATCTTTTATATTTTGGCAAAAACCAATTTCGGCGATCTTTGGTAAAAGGG
TAATGAATCAAATTGTAATGGCTTAATCAGACAATAAGTGTTTGATCTTG
CTGTATTTCTTTACAGATGCAAGGCCAAAGCAGGTTACGATCTACTCAGA
ATAACACACGAAGTATCTTTGCAAAATTATGAAGATTTGAAATTGAAATA
TCGCCACTTGGAAATAGAGCATGGGGAACAAAAGGACAAGAATTATAGAG
CCGATTACGAAAAGCTAAAGGAGAAATATACGAAACAAGTAGAGGAGACA
AGAAAATACTTGAAAACTATTACCGAATTGGAAAAACTTATAACGGAAGC
CAAGGCTGAAAGTAATAAGGGAAAGTGCCAAACATTTAAAACGAGGCTGA
ACCAGATAAGACAAAGGTATCGTGACTTGATTGAAGTGAATAGAGAATGC
TTAAAAGACAAAGCAAAGATGAAACAAATGGAAAATGCTGACAAAGAAGC
AGAACGTAAATGCAAAGAAGCCGAAGCCAAATTAATGAAAATGCAGAAGG
AGAATTTGAATTTATCCACAAAATTGAAAGAAGCTCGAACAAAAAGATTG
CAAATAACAAAAGAACACGGAAAATGTAAAGCAGAACTTCATAACGTGAA
AAGCAAATGTGGCATTTCAACAGTGCAAACTGATGATCGTTGGGGAAGCG
ATGAGACTGCGGCAAATAAAGCTGAATTTAGAATTTTTGATGAAGAGAGC
AAAAAATTCCGAACTATGATTAAAAAGAAACTTGATTTAGCAAAACATTT
TGACTGACAAAATTAAAGCTTTTATTTTTACATAAATGATTCCGTTTCAT
ATCAGACACATATTTTATATCAGGA

Coding sequence (CDS) from alignment at sc0000118_pilon:608211..609585-

>MSTRG.14309.1.p1 ID=MSTRG.14309.1.p1|Name=MSTRG.14309.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1872bp|location=Sequence derived from alignment at sc0000118_pilon:608211..609585- (Clytia hemisphaerica_ch_hm2_pilon)
ATGCAAGGCCAAAGCAGGTTACGATCTACTCAGAATAACACACGAAGTAT
CTTTGCAAAATTATGAAGATTTGAAATTGAAATATCGCCACTTGGAAATA
GAGCATGGGGAACAAAAGGACAAGAATTATAGAGCCGATTACGAAAAGCT
AAAGGAGAAATATACGAAACAAGTAGAGGAGACAAGAAAATACTTGAAAA
CTATTACCGAATTGGAAAAACTTATAACGGAAGCCAAGGCTGAAAGTAAT
AAGGGAAAGTGCCAAACATTTAAAACGAGGCTGAACCAGATAAGACAAAG
GTATCGTGACTTGATTGAAGTGAATAGAGAATGCTTAAAAGACAAAGCAA
AGATGAAACAAATGGAAAATGCTGACAAAGAAGCAGAACGTAAATGCAAA
GAAGCCGAAGCCAAATTAATGAAAATGCAGAAGGAGAATTTGAATTTATC
CACAAAATTGAAAGAAGCTCGAACAAAAAGATTGCAAATAACAAAAGAAC
ACGGAAAATGTAAAGCAGAACTTCATAACGTGAAAAGCAAATGTGGCATT
TCAACAGTGCAAACTGATGATCGTTGGGGAAGCGATGAGACTGCGGCAAA
TAAAGCTGAATTTAGAATTTTTGATGAAGAGAGCAAAAAATTCCGAACTA
TGATTAAAAAGAAACTTGATTTAGCAAAACATTTTGACTGACTCAAAATG
TTTCAGCATTTGTTGCAATCATTAGTGAACCATTTGGAAAAAAGTTACAT
TTCAATTTTTATAAAGATTATAGCAAAAAGGATAGGATTTCCTTTTGATG
TCCCAATAGAGTTATATTTCTATATTTCAATTATGATAATATTTTACTGT
ATGTTACTGAAGATAAATGACGAAAATGAGAATGGATATGTTGATGTAGA
TGGTTTGATCTTTTTGAGCATATTTCTGATATTATTATGCAAGGCCAAAG
CAGGTTACGATCTACTCAGAATAACACACGAAGTATCTTTGCAAAATTAT
GAAGATTTGAAATTGAAATATCGCCACTTGGAAATAGAGCATGGGGAACA
AAAGGACAAGAATTATAGAGCCGATTACGAAAAGCTAAAGGAGAAATATA
CGAAACAAGTAGAGGAGACAAGAAAATACTTGAAAACTATTACCGAATTG
GAAAAACTTATAACGGAAGCCAAGGCTGAAAGTAATAAGGGAAAGTGCCA
AACATTTAAAACGAGGCTGAACCAGATAAGACAAAGGTATCGTGACTTGA
TTGAAGTGAATAGAGAATGCTTAAAAGACAAAGCAAAGATGAAACAAATG
GAAAATGCTGACAAAGAAGCAGAACGTAAATGCAAAGAAGCCGAAGCCAA
ATTAATGAAAATGCAGAAGGAGAATTTGAATTTATCCACAAAATTGAAAG
AAGCTCGAACAAAAAGATTGCAAATAACAAAAGAACACGGAAAATGTAAA
GCAGAACTTCATAACGTGAAAAGCAAATGTGGCATTTCAACAGTGCAAAC
TGATGATCGTTGGGGAAGCGATGAGACTGCGGCAAATAAAGCTGAATTTA
GAATTTTTGATGAAGAGAGCAAAAAATTCCGAACTATGATTAAAAAGAAA
CTTGATTTAGCAAAACATTTTGACTGACTCAAAATGTTTCAGCATTTGTT
GCAATCATTAGTGAACCATTTGGAAAAAAGTTACATTTCAATTTTTATAA
AGATTATAGCAAAAAGGATAGGATTTCCTTTTGATGTCCCAATAGAGTTA
TATTTCTATATTTCAATTATGATAATATTTTACTGTATGTTACTGAAGAT
AAATGACGAAAATGAGAATGGATATGTTGATGTAGATGGTTTGATCTTTT
TGAGCATATTTCTGATATTATT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14309MSTRG.14309Clytia hemisphaerica_ch_hm2_pilongene
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14309.1.p1.exon2MSTRG.14309.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14309.1.p1.exon1MSTRG.14309.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14309.1.p1MSTRG.14309.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000118_pilongenomesc0000118_pilon:608211..609585 -