MSTRG.14296.1.p1 (mRNA) -

Overview
NameMSTRG.14296.1.p1
Unique NameMSTRG.14296.1.p1
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000118_pilon:492484..494979+

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14296.1.p1 ID=MSTRG.14296.1.p1|Name=MSTRG.14296.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2496bp|location=Sequence derived from alignment at sc0000118_pilon:492484..494979+ (Clytia hemisphaerica_ch_hm2_pilon)
TTTACTTTCCATCATCACGCAGTACAGAAGACATTGGAATTCATCTTTAT
CAAAGTCATTTCAAGATGATCAAACTTTTGTTTCTCGTTGCCACCGCATT
GACAATTGCAGTTTGTAAGAATACTTTCTTTATAATATTCTGAGAGGtac
tttgaaaccattttgaaagaatatttctaTTCGTTATACATTTTTAGAGG
AGTTAGAAACTCCAATCCAAACACGAAATCAATACAGAATCAAAAAAGTC
TTTGACAGACTACAATTTTACCTCAAGACCCTACGTTACTAGAAAGGTTA
CGACAACCAAAGATTTTGCCAAATGAATTCGTTTTCGGCAATCTTCCTAG
GaggtttatctttttttgtctTTATCCTAGTCCAGCCATTTTTGAtccac
ccctgtctcagtgacccggtgaaaATTTATTGGCTAGTTGGGTTAAAATG
AAGGAGTTAAAAAACAATGGGGATAAAAGACCTCTTAATGGggattttaa
attcttttgtttatgaCTCAAAAATTCTGGCGGAAATTCCTTTGTAAATT
TCTGGGTATTTTCCTCACCGGGGACGACAATTTggccgatttttccagtg
gagATCCCACTGGGTCTGCGATAGGAGGTGGGGTGTCTTTAGGCACAAAG
ATCCAAGATTCCAGTTTTTCTATGTACTAACATATTTTGTAGTAATTATT
CTATCTTTAAGCTGCTGAAGAAAATTAccgaaatgacaattttgatagAA
TGGGACACGGTAAGATTTATTCAGCAGATATCCTTCCACtatccttgaaa
atcgaaaagcCAATAATACGCCGGGAACGAGCGATCTCATTTGAATATAA
TGGCAGCCCTTTGAGTTCGGAGAAAATACATTACGGCTACCTTGTAGAAT
CCACTGCTTACCATTGCTATAGGTTTTGTATGTTGAAAATAGCCGTAGTT
CAATTTTATTCTCGTTTTTCAGACATCATGATGCGAGGTGGAGCTAAAGC
TGAACGTAAGTTTACCATAATTGTCCTCTGTAACACTTTAATTCTCACAT
GACTCTACTATAGTAGTAGTACCAGTACCCATTGACTTCCATGCCCGAAT
GGCTAAACTTCGAGACTCctagatgggaaatgaagccacttatttccaat
cTAAAACTTCCGCGCGTGGTTTTCAAACAAACGCtatattgaaagtaaaa
tttatcaCTAGAactcaaaaaatgcagtcctcaatgacaaagaaaccgct
agatacaatccgtcgtcatgatcgCAGcacgttctaggcgcgttctggat
ggaaaataaatggcttcactttttcttgcctgggaaaggttagagattct
actccagcccttcgggctttaaactcaaattgaGTGATCTGACCTGATCA
ATAACCAAATTAAACCGCATATTTGTGTTGttacaaaatatttcataacC
CGTTACTGCGTATGAAAAAGTATATACTAAACTCATACACCTCAGACAAG
TTTACGTTTCAATCTGCTATAGGATTCCGTGTGTCTCCAGTGTGTTAGTT
TGTATGTTGCTACTTTGCACTGCACAGAAACACATTTTGTTAGGGTGCAT
CTCATATCTCATATTGATAGTTTTTAATACACGgtttcaaaattatatca
atgcagtcaaaacatatgtgattactcgaaaaagttcacgtgatttccCA
TGTTACTTGTTTTACAAcctacagctgataactttatttatagtgtcaat
aaattcgaaccaatcagaaataaatgtcatgtaaaaatttcgagtaaaag
cgtgactTGTCTTCAGACTTTCATACTATTACTTCTTGGGTTACCGAGTA
GAGATAGCATTGCCTGTAAATAGGCATGatatctacacgttttttttata
agaacgtcaaaaattttcaaagccttcggatgttcttagttttttggatt
tgaagcctaaaaatgttcttaaaatgttcttattatcagcattttttgag
cattttgatgtactttcttaagaaaatgcatgttttcaagtctccaaagc
cttagaatgttcttagaatgttcttaaatttttgggcctcgaagccttat
gttcttatatagtttgttcttataaaaaaaaacgtgtattgaaaattcaa
aattcattgccgtactaCACTTTGTTCTACAAAGTATGTTTAATAGGAGC
AAATAGGTTTGGTCCAGCTATTTCTgataattctttttcatttttatata
gGATATGCATATCTTCGTGATTTCGCAACCTTTCAAGACGGTGGATGTAT
TGATGCTGATACTTTTTCCGTCTGTAGTACACAATTCGCTAAAGCTGGTT
TCAAATGTGACCAATCAAGATATAACTTCGTAAAGGGATGTCAAAAATAT
TGTGAATTTTgtgtttaaaatctttaaaattgaacaaaaataaggtctat
ttattttttttgtctatttatCTGAAATATATTGCAATCTTAGATA

Coding sequence (CDS) from alignment at sc0000118_pilon:492484..494979+

>MSTRG.14296.1.p1 ID=MSTRG.14296.1.p1|Name=MSTRG.14296.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1440bp|location=Sequence derived from alignment at sc0000118_pilon:492484..494979+ (Clytia hemisphaerica_ch_hm2_pilon)
TACTTTCCATCATCACGCAGTACAGAAGACATTGGAATTCATCTTTATCA
AAGTCATTTCAAGATGATCAAACTTTTGTTTCTCGTTGCCACCGCATTGA
CAATTGCAGTTTCTGCTGAAGAAAATTAccgaaatgacaattttgatagA
ATGGGACACGACATCATGATGCGAGGTGGAGCTAAAGCTGAACGATATGC
ATATCTTCGTGATTTCGCAACCTTTCAAGACGGTGGATGTATTGATGCTG
ATACTTTTTCCGTCTGTAGTACACAATTCGCTAAAGCTGGTTTCAAATGT
GACCAATCAAGATATAACTTCGTAAAGGGATGTCAAAAATATTGTGAATT
TTgtgtttaaTACTTTCCATCATCACGCAGTACAGAAGACATTGGAATTC
ATCTTTATCAAAGTCATTTCAAGATGATCAAACTTTTGTTTCTCGTTGCC
ACCGCATTGACAATTGCAGTTTCTGCTGAAGAAAATTAccgaaatgacaa
ttttgatagAATGGGACACGACATCATGATGCGAGGTGGAGCTAAAGCTG
AACGATATGCATATCTTCGTGATTTCGCAACCTTTCAAGACGGTGGATGT
ATTGATGCTGATACTTTTTCCGTCTGTAGTACACAATTCGCTAAAGCTGG
TTTCAAATGTGACCAATCAAGATATAACTTCGTAAAGGGATGTCAAAAAT
ATTGTGAATTTTgtgtttaaTACTTTCCATCATCACGCAGTACAGAAGAC
ATTGGAATTCATCTTTATCAAAGTCATTTCAAGATGATCAAACTTTTGTT
TCTCGTTGCCACCGCATTGACAATTGCAGTTTCTGCTGAAGAAAATTAcc
gaaatgacaattttgatagAATGGGACACGACATCATGATGCGAGGTGGA
GCTAAAGCTGAACGATATGCATATCTTCGTGATTTCGCAACCTTTCAAGA
CGGTGGATGTATTGATGCTGATACTTTTTCCGTCTGTAGTACACAATTCG
CTAAAGCTGGTTTCAAATGTGACCAATCAAGATATAACTTCGTAAAGGGA
TGTCAAAAATATTGTGAATTTTgtgtttaaTACTTTCCATCATCACGCAG
TACAGAAGACATTGGAATTCATCTTTATCAAAGTCATTTCAAGATGATCA
AACTTTTGTTTCTCGTTGCCACCGCATTGACAATTGCAGTTTCTGCTGAA
GAAAATTAccgaaatgacaattttgatagAATGGGACACGACATCATGAT
GCGAGGTGGAGCTAAAGCTGAACGATATGCATATCTTCGTGATTTCGCAA
CCTTTCAAGACGGTGGATGTATTGATGCTGATACTTTTTCCGTCTGTAGT
ACACAATTCGCTAAAGCTGGTTTCAAATGTGACCAATCAAGATATAACTT
CGTAAAGGGATGTCAAAAATATTGTGAATTTTgtgtttaa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14296MSTRG.14296Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14296.1.p1MSTRG.14296.1.p1-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14296.1.p1.exon1MSTRG.14296.1.p1.exon1Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14296.1.p1.exon2MSTRG.14296.1.p1.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14296.1.p1.exon3MSTRG.14296.1.p1.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14296.1.p1.exon4MSTRG.14296.1.p1.exon4Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000118_pilongenomesc0000118_pilon:492484..494979 +