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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000118_pilon:201322..205662+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14271.2.p1 ID=MSTRG.14271.2.p1|Name=MSTRG.14271.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=4341bp|location=Sequence derived from alignment at sc0000118_pilon:201322..205662+ (Clytia hemisphaerica_ch_hm2_pilon)
ATTTAACTTATATATACGCTATGACATGAGAGTTTATCTCGAATAACTGT
ATCGTTATGGAGGCTTTAGACTTTTCTTGTGAAAACAAATTTATTAGTTT
TTCTGTTATCCTAATTTTTATATATTACCTGATTAATTTCATTGTGGATC
ATTGGATTTCAACCGAAgagaagaaaaatgttttggtgACAGGCTGTGAT
TCAGGTTTTGGTTTCCAAACAGCTTTAGAATTAAGTGAATCTAATTGTAA
AGTTTTTGCTGGTTGTTTAACTCAAGATGGTGTCAAACGACTTGAGAGCA
ATGCCAGGTTTCGAGGGATGGCTTTTATCATGGACGTGACTAAAGACGAG
GATGTTCAGAAAGCAAAGGAGGTCATTGAAGAGAATGGAGGTATaagact
tttttttatttaagtatttcGTCATGATGGCTACTTAACATACACTTATA
GCTATCCGTCTGACTGTATGTCTCGTGTTTTATTATGTTATCAAAGATTT
GGGTATCTCAAGGGCAGTAGCATGGTGGCAGGGGACAGGGGACAGCcgat
ttttttttgggggggtgCCAAAATACAATGGGCGaaaaaaaGATACCTCT
GATTGATAATTTTGGCGtccatttctttttttacaccttaaaattggcag
ttttcggccaaaaagagagaaattaGTTTTCGtactcgcttcgctcgcgt
aattttgcaaagatattttcttttcataggGGGCGAAAAAATCTTGATCT
CCTTCATTTCGatttgaatctctctgtaatttgaaGCGGATTTAGGTATC
ATGCTCGAGCACGAGTTGAAGAGAGTAGAATTTAGTGTATGTCAGGAAAT
TGTGCCTAGTTTTTATTAGAACAAGAAGGCTCCAAAACGTCTAAAAATGG
AATaaaaaaaGCTCTGAGCGTGGGATGAACGAGTTTTAAGCAAAGTAAGG
GTCAATTACTTTTAAtgattattttgtaaatatcgCTCCTTATCTTGGCA
TAAGAACTTCAGAATCTAGTCTTCCTGGGAACACTGAAAATAATCCGCTC
GAAAATCATCCTAGCGTCCTTCGCATCCTCGAATCTCAGTCTACGAACAA
ATCATTTTCGTTTAGTGAGGTTACCCCTGAAGATATCCAGCGAATAATGA
TTAAACTTAACCCTTAGACCTTTTTTATTTAAGTGTTTCGTCAAtggcag
tagcgtggtggcagggggaaGGGGCAGTGTTTCATCAATTGATACTTAAC
ATCCGCTTATAGCTATCCGTCTGACTGTATGTCTCGTATTTTACTAGGTT
ATCAAAGATTTGGGTATATCAATGGCAGTAGCATGGTGGGAGGGGACAGT
CCCTCCCCAGcggccgatttttttttttggggggggggtgccaAAATACA
AAGGGTGCAAAAAGGTACCTCTGATTACTAATATCGGCGCCCAtttgctt
ttttacaccttaCAATTTGCAGTTTTCGGTCAAAAATATTAGTACAATAA
GGCtccaaaatatctaaaaattgaataaaagaacAAAGCTCTAAGCCTGG
GATGAACGAGTTTTAAGCAAATTACGTAAggtatactttaggcgtacaaa
ctttcgcaaacagaaactttcgcggttttcgTGAATTTTGCCCTTTATCG
CGAAAGTAAAAGTCTTCGAAAATTCTTGAAAGGGCTATCCGCGAAAGTTA
CTAGAAAAGTACTCGTTTAGCCTGCTAACGCTTCATAAgtcaaaaagaca
aaagtttcaATCCAATTTGTAAgtaattttttcatgtgaaaattttcatt
tttgtcttGATTCGTGAAAGTTTATTCATGCTCGCGAAAGATATTTTCGT
CGagttcgcgaaagtaaatgttggaaatttcgcgattttccGACCTCGCG
AAGGTTTCTGCTAGGGAAAGTTTGCACGCCTAAAGTACCATAGTCATTGT
ACCATAAATTGTAAAATCCACCTTGTAGATAAATAAGAACAAGGTAAAGA
ACATTTGAGGCTTAGTGTgctgaaaaatgagaacagcTGAGCTTTAAACG
ATTCTAATTATAGAACTTCAATTAGAATGTTATCTCCTTAATATTCAgcc
accaaaaatgaaaattaaagatggtaactCAAGCTGCAAGATTTAGTTAT
ACTGTGAATTTTCCTATATTTTCTACAGCTTTGGATGGTATAGTTAACAA
TGCTGGTATCGCTATTCATGGATTGATCGAATGGCAATCTATCGAATTGA
TGAAGAAAACATTCGAAGTGAATTATTGGGGAACCGTTCGTGTTACCAAA
GTCATGCTACCATTATTGAAAAAGTCACGGGGTCGTATCGTCAATGTGAC
AAGCATGGGAGGTGTGTTGTTTTTACATATAGAACTGCAAACTGTTTCAT
CTATCTTTTTGTGATCCATTGCGAAGATGGAtggttttttttcaaagaaa
tgaaCCCATGATCTGACAAATAGTTTTCTTCTAACGtttgtctttttaaa
aatagatttcatggCTGGATAATGGGATGGCGGGATGGCGGGATTGCGGT
AATGGTATTACAACCAAAAATGAATAACATACTTTTCTCGCCTTTCTCTA
TTAAGAATAGCTTTTCATGACTTCAGATTCTcaataaagatttttatttg
aaactacAGTGGACGCACttttaatattgaaagtcaccgtcaacaagaaa
ctctcataaatgccGATCTAtctgaaaatcgaattagataGCGTCAACTG
TAATCTGCTTTTTCTTCGCTAACAAGCCTTTCATGTTACCCTCTCGATAA
TAATCATTTACATGTGTGATTCTATTTTGATAGGACGACTCTCGCCACCC
TACACTGCCCCTTATTACGGTTCAAAATATGCAGCTGAAGCGTTTTCTGA
TAGCTTACGTCTCGAAGTCAAACCATGGGGTGTTTCAGTACATATTATCG
AACCTACTTTCTATGCTACTGGAATCTTGGATGAAGAAAATATGCATCGT
GATTGGCGCAAAGTTTGGGATCAACAACCACAGGCAACACACGATGAGAT
TGGGGAAGAGCAATTCAAGAACTGTAAGAGTTACTGCTAATCTTATCAAT
TTCGCCCCATATTCTTTATTAATTTCTTCTTGGTGCACAATTTAGAGTGG
GAACATTTTGGACTAGATCACAAGGCTAAGTCTCACCAATTATACTTACC
TTACCAACAAATCGATAGAAAGTCAGTTTTTACAAGCGTTGAATGACCTC
GATATAACACTCCATTCTTTCTActagacccggtaggatttttaaGCCTG
TAGGAGTAAAAATAGCGGATTGAAACTCGATGAAGATTGATACtctcatg
tttttttatggctggggatttgagtttaatgttctactagggacgatatt
ttggccaacttTTCCAGTGGGAGAGGTCCCACCGGTTctgcgagaaaggg
gtgtaatatACAACGTACAAGTATACATTCATACTTATCAACGCAATGGC
TTCAGAAGTCTCCAggttaccgtattacttcaaataaacgccccctcgaa
taaacgccccttcctAAAGGAAAGATTTTCGATAAACGCCCACCTCAAAT
AACAAATAAACGcgcccttcgaataaacgcaTCCCCTCTAAAAAGgatgt
ttatttgaaacaagtaacTGTTAGGTATGAAGAAAGAGTTAGACAATCag
ttttcaaactaattttgaccCACTTCTACATAAAATAAACCGAAAACGCA
AAACAAGGTTCCCATTCGCTTTGATGAAATGACCTTATGGCTAAAGGTta
taataaacgccccctcgaacaAATGCCCTCCTAAAATCCACCCGCGGCGT
TTATTCGAAGCAATACGGAACAAATataagtatttaagaagttttcTCTC
GTTTTaacttatcttttttcttttttgcagtTGTGTCCTCGTTCTTCAAT
TCCATCAAAATCACTCAAAACATTGGCGAAGTTACCAAGAGAATCCGTCA
CGCATTGCTGGCAAAGTTCCCGAGACGTAGATACATCACAGGACTTGATA
GTAAACTGTACGCCATTGGATCACACCTTCCGACAGCTTTTGTGGATTGG
ATTATCTCTTGTAAGATCGGCATTCTTCATCCAAAGACAACAACGAAGAA
AAGTCAATGATTTTTCAAAGTTCGCTGCTTTTCATGGAACAACGATTTTG
AATTAGTAATCAATTATTACATGAGAATTATTACATAGAATATAATACTT
TCAAACAAGATTTTGCCGTAAATAAaccattttttgataaaaagacTCCA
AGGGTCCCTCGCTAAAAAGGTCgatatttgatttatttttg Coding sequence (CDS) from alignment at sc0000118_pilon:201322..205662+ >MSTRG.14271.2.p1 ID=MSTRG.14271.2.p1|Name=MSTRG.14271.2.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1128bp|location=Sequence derived from alignment at sc0000118_pilon:201322..205662+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGAGGCTTTAGACTTTTCTTGTGAAAACAAATTTATTAGTTTTTCTGT
TATCCTAATTTTTATATATTACCTGATTAATTTCATTGTGGATCATTGGA
TTTCAACCGAAgagaagaaaaatgttttggtgACAGGCTGTGATTCAGGT
TTTGGTTTCCAAACAGCTTTAGAATTAAGTGAATCTAATTGTAAAGTTTT
TGCTGGTTGTTTAACTCAAGATGGTGTCAAACGACTTGAGAGCAATGCCA
GGTTTCGAGGGATGGCTTTTATCATGGACGTGACTAAAGACGAGGATGTT
CAGAAAGCAAAGGAGGTCATTGAAGAGAATGGAGtTGTGTCCTCGTTCTT
CAATTCCATCAAAATCACTCAAAACATTGGCGAAGTTACCAAGAGAATCC
GTCACGCATTGCTGGCAAAGTTCCCGAGACGTAGATACATCACAGGACTT
GATAGTAAACTGTACGCCATTGGATCACACCTTCCGACAGCTTTTGTGGA
TTGGATTATCTCTTGTAAGATCGGCATTCTTCATCCAAAGACAACAACGA
AGAAAAGTCAATGAATGGAGGCTTTAGACTTTTCTTGTGAAAACAAATTT
ATTAGTTTTTCTGTTATCCTAATTTTTATATATTACCTGATTAATTTCAT
TGTGGATCATTGGATTTCAACCGAAgagaagaaaaatgttttggtgACAG
GCTGTGATTCAGGTTTTGGTTTCCAAACAGCTTTAGAATTAAGTGAATCT
AATTGTAAAGTTTTTGCTGGTTGTTTAACTCAAGATGGTGTCAAACGACT
TGAGAGCAATGCCAGGTTTCGAGGGATGGCTTTTATCATGGACGTGACTA
AAGACGAGGATGTTCAGAAAGCAAAGGAGGTCATTGAAGAGAATGGAGtT
GTGTCCTCGTTCTTCAATTCCATCAAAATCACTCAAAACATTGGCGAAGT
TACCAAGAGAATCCGTCACGCATTGCTGGCAAAGTTCCCGAGACGTAGAT
ACATCACAGGACTTGATAGTAAACTGTACGCCATTGGATCACACCTTCCG
ACAGCTTTTGTGGATTGGATTATCTCTTGTAAGATCGGCATTCTTCATCC
AAAGACAACAACGAAGAAAAGTCAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000118_pilon | genome | sc0000118_pilon:201322..205662 + |
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