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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:1014971..1018170+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14253.1.p1 ID=MSTRG.14253.1.p1|Name=MSTRG.14253.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3200bp|location=Sequence derived from alignment at sc0000117_pilon:1014971..1018170+ (Clytia hemisphaerica_ch_hm2_pilon)
tTTGACAATTGGCAAGCAGTCTTAAAGTAAGTAAGTGTGCATGTGAAGAC
AACTTCGATAGGGAAAATAAAATACTCATCTCGGACGCTGAAGTAACACA
TAGTGGGCGGACACGCCTCGCAAAAGATTATTAGTACAAGCATTGAAGGA
CAATAAAGAGCAGTACTCAATATGTATTCGACCACGCTGCAGAACACAAC
TAACGATATGAGTTCAACTGGAAAAGATTATGGATATTCACGACTGTTTC
ACCACCAGGGATTAACACATACCACGTCTCCCGCCATCTCCACCCAACAA
CCGCCACAACCCACTTCAAACAGCATTTCCGCCTACCAATATGCTAACTC
AACATACGGCGCATCCAGAGAGCGTGTTTACTCAGCTTCAAACTCACTTC
ACTCGAAATTCCTTGAGCCCTCTCGATCACCTATCCTTCAACGAAGCTCT
AGCCTACCGTCGCAGAACAGCCCGTCACCTCCTTACATAGGCTCAACCAA
CGCCAACAGCAATACCATGCAGTATGGTTCCCACTATGGTAGCTTGAAAT
CGACATCCTATCCTTCCAATAATCCAAGTTCTTGGTACAACAGCAGCATT
AGCAGTGTCAGTGGAGGAGTGGGCACTACCTCCTTATATCATCCACCACA
ATCTTTAGAAAATCTTCAGGATTGGCAAAACAACGGCTACCCAAGCGGTG
AAGGTAAGCTCCTCTTATCCTACCCATCTTATGTTCACTTTGGAGATTGA
AATACGCGTTGAAAAGCATAGCAATGGTGCAAGTTTGAATAAGCCTTGGA
GAGTTAAATTGGATAGATAATTTTTTGGTGCCttagttgaaaattttttt
atggtcAATTTCACAAGATTTAAAAAAGGGGAATTATaccttttcaagtc
agaaagtATACAATACaaaaaaaaGGGAGCATCATCAAATTGGGTAAGTA
ATTTTGAAGAGGGAGATACTGTAAGGAGAAGATAATGAATTATTAAGAGC
TGAAGGATTTAATAAAAAcctcaaaaacttaaaattagtTAAATTAGTAA
GAATCTGTTATTTCAGCTTATTCCTAATGATGCTCCAGTCTCTTAAAATA
ACTTAAAACCACAAGCAAAGGGAATGGGTATATTCGACTTTCGAAAATAG
AAATtaaactacaatcatggacgaaaattttgaggtaagAGTAGAATATA
ACCTTCAAGGCCCCATCCCTCCGGTGGCAATGTTGAAGGGCATCGGAAGA
GTCGGCGGGAAGGCCGTTTGCACTAAACATTGCCATTGGGGGAAGAGGGG
ACCATTGTTTTTTCCAgcattttccaatgtttttctcgaaCATTTAAGTC
CATGAGTGTAGATCAAACAAACTTGTAATTCCTTAAAAAATCATTTCGTG
ACTTGACACTTGTTTAGAGTGTCAGCGAGAAGCGGTGAAAAGTTTGCTTG
GATTTTCATTTGCccttgaaatctctattgataaaaaaaGCTATCTGTTA
AAAAACATTTACTGTACAATAGGTAGGATATGGGTTAGGGAATAATTTTC
TGAAGAGTGCATTAATCAAACTTAACGAACaacttttatttgaaaatatt
ttattccaCTGAAGaagcaattttaagaaaatttcagaaTATAGCTTTAT
TAACAAAATTGGGGAGTAATTTATTTCAAATGTGTCAAAACGCATTCAAA
GTATTAATGAAGTCGTTAGTTGCCATTAACTTAGTTAACGAGCGAAAATT
CATTTGCCACATATTATATATCTACATTCTCAAATAGTTTTTCTTCGATT
CAAAGCTATATAAAATATCCCTTTTACtaaacttcaaaacaaaaccttgc
AAAACTTCATCATTTGAATaaactgaagtaagaaagaataaactccatgg
tttgaaaaattgaaaataagtgaaaatgaaaatgttcctaattgtgaggc
atcataaaaaaCTAATGAGGCTTAAAGTGTAATTGTCCGGTCATTATTTC
TGATTATGGAGCAATTAGTAAGCAGATTCATCACCTTTTCCGCTCTAAAC
CTCATTAAGGACTATAATATCCTACAACGGCCTTCCCATCTCTACGTTAT
ACAGAGGTCAACtttgataaaaaaggaaaaatcatcCTTACCATACAGTG
AATGCGCCAACTGGAGTCCATATAATGCGCATGCGTAATTTATCGTTCTT
TAAACCGTTAGTGGTTAAACAGCGTAAAGTACAAAGAGTAATGAATATGT
AGGCGTGGTACTCGTTGACAAGGTCAGGGTTTTGGATGGTTAAATATGTC
GTTCTTAATTGTAGTTTTTTCTCGTTCTTTGTCGTTTTAATTCGTTTCTC
GTTTTAGACTTCGTTCTTTCGTGGTCTTATTATAGTGGTCTCCTTTTGGA
GCTTACACTCTCTCTTACGGTTGAACACTTATACATTTCTTCACATTTTA
ATCATCAAACGACGCTTTATTTTTCAGGGTACTTCCCATGGAACTGCTGT
TTCACCGACGGAAAACGGAAACGAACTTCGTACACAAGACGACAAATTTA
CGACCTCGAGAAAGAATTTGCAAAGAATCGGTACATCACTCGGGAACGAC
GGATTGAAATGTCGCTACAACTGAATCTCACTGAACGTCAAATTAAAACA
TGGTTTCAAAACCGACGAATGAAAACAAAACGGGAGAAACCGACATCGAC
AAAAAACGAGAATCATCACGAACAAACTCATCAAACACATCAACCTCATC
CAGTCCATCAAACTCATAACGTCCTACTTAGTGATACTACAGACATTAAA
GCagttttgaacaatatataaAGTGAAATAAATCACAAACGTAAGCTGAA
ATAGAAGGAGGAGTAGAATCTTAGATTCATTGacgaaaaaactgaaaaag
cagacatcaatatttaaaaatcttaaCATTTAATTTAGATTTCGATACAT
TTGCGTTGACCGCATTTGTATATCACACTTTgtataaaatataacaaaaa
tgTATAGTAAGATTTTTTAAGTTCAGATTCCATATATAAAAAAGTGCCAG
GGGCGCTTTTTGGTTGATGCGATGGAAGATTTATATTgattaaaaagaaa
tatatttaGAATTCTTAATTTGATAACGGTAGAATCTATATAGACTTTGT
AAATAGTCATCTAtgtgaaataaaatgaaaatttcaatgttgGAAACACT
Coding sequence (CDS) from alignment at sc0000117_pilon:1014971..1018170+ >MSTRG.14253.1.p1 ID=MSTRG.14253.1.p1|Name=MSTRG.14253.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1752bp|location=Sequence derived from alignment at sc0000117_pilon:1014971..1018170+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTATTCGACCACGCTGCAGAACACAACTAACGATATGAGTTCAACTGG
AAAAGATTATGGATATTCACGACTGTTTCACCACCAGGGATTAACACATA
CCACGTCTCCCGCCATCTCCACCCAACAACCGCCACAACCCACTTCAAAC
AGCATTTCCGCCTACCAATATGCTAACTCAACATACGGCGCATCCAGAGA
GCGTGTTTACTCAGCTTCAAACTCACTTCACTCGAAATTCCTTGAGCCCT
CTCGATCACCTATCCTTCAACGAAGCTCTAGCCTACCGTCGCAGAACAGC
CCGTCACCTCCTTACATAGGCTCAACCAACGCCAACAGCAATACCATGCA
GTATGGTTCCCACTATGGTAGCTTGAAATCGACATCCTATCCTTCCAATA
ATCCAAGTTCTTGGTACAACAGCAGCATTAGCAGTGTCAGTGGAGGAGTG
GGCACTACCTCCTTATATCATCCACCACAATCTTTAGAAAATCTTCAGGA
TTGGCAAAACAACGGCTACCCAAGCGGTGAAGGGTACTTCCCATGGAACT
GCTGTTTCACCGACGGAAAACGGAAACGAACTTCGTACACAAGACGACAA
ATTTACGACCTCGAGAAAGAATTTGCAAAGAATCGGTACATCACTCGGGA
ACGACGGATTGAAATGTCGCTACAACTGAATCTCACTGAACGTCAAATTA
AAACATGGTTTCAAAACCGACGAATGAAAACAAAACGGGAGAAACCGACA
TCGACAAAAAACGAGAATCATCACGAACAAACTCATCAAACACATCAACC
TCATCCAGTCCATCAAACTCATAACGTCCTACTTAGTGATACTACAGACA
TTAAAGCagttttgaacaatatataaATGTATTCGACCACGCTGCAGAAC
ACAACTAACGATATGAGTTCAACTGGAAAAGATTATGGATATTCACGACT
GTTTCACCACCAGGGATTAACACATACCACGTCTCCCGCCATCTCCACCC
AACAACCGCCACAACCCACTTCAAACAGCATTTCCGCCTACCAATATGCT
AACTCAACATACGGCGCATCCAGAGAGCGTGTTTACTCAGCTTCAAACTC
ACTTCACTCGAAATTCCTTGAGCCCTCTCGATCACCTATCCTTCAACGAA
GCTCTAGCCTACCGTCGCAGAACAGCCCGTCACCTCCTTACATAGGCTCA
ACCAACGCCAACAGCAATACCATGCAGTATGGTTCCCACTATGGTAGCTT
GAAATCGACATCCTATCCTTCCAATAATCCAAGTTCTTGGTACAACAGCA
GCATTAGCAGTGTCAGTGGAGGAGTGGGCACTACCTCCTTATATCATCCA
CCACAATCTTTAGAAAATCTTCAGGATTGGCAAAACAACGGCTACCCAAG
CGGTGAAGGGTACTTCCCATGGAACTGCTGTTTCACCGACGGAAAACGGA
AACGAACTTCGTACACAAGACGACAAATTTACGACCTCGAGAAAGAATTT
GCAAAGAATCGGTACATCACTCGGGAACGACGGATTGAAATGTCGCTACA
ACTGAATCTCACTGAACGTCAAATTAAAACATGGTTTCAAAACCGACGAA
TGAAAACAAAACGGGAGAAACCGACATCGACAAAAAACGAGAATCATCAC
GAACAAACTCATCAAACACATCAACCTCATCCAGTCCATCAAACTCATAA
CGTCCTACTTAGTGATACTACAGACATTAAAGCagttttgaacaatatat
aa
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:1014971..1018170 + |
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