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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:808392..811862+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14226.3.p1 ID=MSTRG.14226.3.p1|Name=MSTRG.14226.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3471bp|location=Sequence derived from alignment at sc0000117_pilon:808392..811862+ (Clytia hemisphaerica_ch_hm2_pilon)
GGCCAATGAGAGCTCGTGTCCGATGTTCAATTGTGACAAATCTAACGGAC
GATATAGAGCTATAGTCCGGTAGAATTAGCCTGAGACCTGGACAAAATTC
CCaacaagctgaaattttgcacagaggtccCCAATAGGATACTTGAccac
caaaaaaaaagccccatcGATTCGGACatgggaaaactttttacgGACGA
TTTAATTTCGGACACGTCcgaaaaataaacttgaaaaaaaagttctcaaA
ATATGCAAGTgtcatatatcaaaagaaagataatttcaatacgaacaaaa
aaattgCCTACAGGAAAGCCTGGAAATCATCTCACAAAGAGTTAGGAGAC
CTCGAATACATCAtggttttcatcttctttttatattatgtttaaattct
ttaaaattactATTATGTTTAAGTTTGTATGAGTATGATTTTTAGGTTCA
AAATACGATTTTAAGAGATTGAACACTCACAAAGatctttttcattattt
ttgatgCCATTGCAGTGTAAatatgtaaacattcgaatgcGAATAAGTGT
TATTTACATTCATCAATTCATCAACTTGACAACTCCTGAAaggtatattt
ttcattttttgaaaagtaactTTTAACATGATCTGTGTATATATTTCATC
TGTTTTTATTTAgagtaaaaatgaaagaaatattaaaagtttaaatAAAA
GTGGTGTATTGTAGAATGGCTACATTGGGCAGAGTATGCATTTTATGTGA
AGAAGATGTTCAGCCAGACAATCTAGTTGAAGTCAAGAAAAAAGGCTTCG
ACAGACTCGTTCAAGTTGCCAAACAAAGAAAGCTCGAAGATTTGCACAGG
TTTTTATATCTCAGTAGTTTTAAGAAAAGGCCCAGGAAGTGTGTAAATTA
GATTCATTAGAACCTTAGAAGTATAGAGTTTTCGACAGTCCCTTTTAATA
GTTTACTACAAGGTTGGGTTTAGGTTTTTTAAGGTTCATCTTCTTCCGAT
GTTTATCAGCATAGTAATGTCAGGATTTTTTAACCTGAGAACAGATGTGG
AGTTTTCTTAATgcgacacgctgaagctctaaagatcgctgaaaactaac
atctgaggaaaatggtcatgtttctatgaaaaaatttcagtcagaaaTTT
GTCTTGTGCCAAAAGCGCCAATATTAAAAACTTGCTGAGATGCAGATGGC
ATATTCTTCAGATTGAATATTTTCGCCCacgtctttagagctttagcgta
ctgAGCCAGATAATACggaatctgttatcaggttaggatTTTTGAACAAG
GGTAGATCAAATAGGTACTCTTGAGaagaaaattttagttttaaggCTCA
TAACCAttacggctagttcgaaacacagATCACAGGTCATAGTTCACTTC
CTCATCTAAAACATACTTTATACGAGTATGTTCTAATACCACTTATTGTA
TTAGAACATACGTTATAGACATTTCTAACAATAACTATGATTTGTTAATC
TTATTTACAGCAACTTGAAGGAACGGGAGGTTGGAAACGTCTACGTCCAT
CATGACTGTAGGAgaaagtttgtggacaaaagGAAAATGGATGATGGTCA
TATTACCGTCAAGAAGCGGTTGAGATCATCAGTTGGAGCGATGGGTTCAT
TCAACTGGAAGTTGCATTGCATTTACTGCGGTGAACAAAAAGATGAAAAG
CGGAAAAGTAATGAAGTCAGCGAGGTGGAAACAATTCCGATCAAAAGAAG
CATCCTAGCACAATGCGATGCAAGGAATGATGAATGGGGAGACTTAGTCC
GTGACCGTGTATTACCATCCATCGATATTGTAGCAGACGAAGGATTCTAT
CATCGCTCGTGTAtggaaaagttttttacaaTCAAGTCAGGAAAGAAATC
TGGACGTCCTGTTAACGAATTGATGCAGGATAGTTTTGATAAACTGTGTG
AATGGATGGAAGGTGCAAGCGAACATGAGCCACTTCTGCTAAAGGAAGTA
TATGCAAAGCTTGTAGAAATGAGTGGAGACTCTAACAGCTGTTACAGTTC
TAAGCAGCTGCGAAGAAAGCTGAAGGATCGTTACCAAGatcatttaatat
ttattgaaGAAGATGGAAGATCGAGTATGTTGTGCTTTAAAGACTTTGCT
TGGTTTATAATGAACGACTTCAAGAAAAACCATTCCCCGACTCCGGGTTC
AATAATGACAGCAGCTGCAAAAATAATAAAGTCAGAATTCCGTCAAATGG
CATCCAACAAGTCTCACTATCCTGACATAGAAAAGATTACGGACATGGAA
TACTTGAAGAAATGGATCCCAGAAAGTTTACTTGGGCTATTAAAGGAGCT
CATCCCATCAGAACTAAAGCAAGTCAGCATTGGCCAATGTATATCACAAT
CAGCTAAACCAAGGTCAATGTTGGCACCAATTCCTTTTGGCATTGGAGTA
GATGTTGATAGATCTTTCGAATCCAAATGGTTCATAAACCACCTGGCTAA
ACTTGGCTTCTCCGTTTCATATGATGAAGTAACAAACTTTAAGAGGTCAG
CTGCTTCAGCTTCTGAAGGTGATGGTCCAGTTGAAGGTGGTGGTCCAGTT
GAAGGTGGTGTTTCCGTTGAAGGTGATGGTCCAGCCGAAGGTGATGGTCC
AGCCGAAGGTGGTGTTCCCGTTGAAGGTGGTGGTCTAGTTGAaggtggtg
tttccgttgaaggtggtggtccagttgaaggtggtgttttcgttgaaggt
ggtggtCCAGTTGAAGGTCGTGTTTCCGTTGAAGGTGGTGTTTCCGTTGA
AGGTGGTGTTCCCGTTGAAGGTCGTGTTTCCGTTGAAGGTGGTGTTTCCG
TTGAAGGTGGTGTTCCCGTTGAAGCTGGTGTTTCCGCAGGAACAATAAAC
AACTTTTTTGAGCAATATGCAGCCGATAACATGGATAATAATCTGAGAAC
TCTAACAGGAAAGGGTACGTTTCACGGGATGGGGATAATCTCCATGTCTA
CAAATGGTGCAAAAACATTCCAAGCAATCAGACGTTTGaagaaaaacgag
aaaaaacaAACGACGGGATCCGTACCAATCATTCCTTATTTTGGATCTCA
TGAACGTGGCTTGTCAAAGCTAAGATTCAAAAAGATTAAAGATCTTTCTG
AGAGTTTCAAAGATGACGTCATGCACTATTACCAAGAGAAGACCATCGAC
CTTGTATGGCAATTAGCATGGCACTTTAAAACCCGAGAATCTGCTAGACC
GAATTGGCAAGGATTTATGCAGACTGCGGCAGTACCAGAAAATAGCGACA
ATCCCGTGTCAAAGTCGTCCATAACATTCTTACCCATCATCGACCTCAGT
TCATCTGACGAAACTTGCTTATACTCAACACTTCTATTCATTAAAGACGA
AGCAAAGAAGCACAAAATTGAAGTACCCTGTATCACCTTTGATCAGCCTC
TATGGCAGAAAGCTATCGGGA Coding sequence (CDS) from alignment at sc0000117_pilon:808392..811862+ >MSTRG.14226.3.p1 ID=MSTRG.14226.3.p1|Name=MSTRG.14226.3.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=3480bp|location=Sequence derived from alignment at sc0000117_pilon:808392..811862+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGATGGTCATATTACCGTCAAGAAGCGGTTGAGATCATCAGTTGG
AGCGATGGGTTCATTCAACTGGAAGTTGCATTGCATTTACTGCGGTGAAC
AAAAAGATGAAAAGCGGAAAAGTAATGAAGTCAGCGAGGTGGAAACAATT
CCGATCAAAAGAAGCATCCTAGCACAATGCGATGCAAGGAATGATGAATG
GGGAGACTTAGTCCGTGACCGTGTATTACCATCCATCGATATTGTAGCAG
ACGAAGGATTCTATCATCGCTCGTGTAtggaaaagttttttacaaTCAAG
TCAGGAAAGAAATCTGGACGTCCTGTTAACGAATTGATGCAGGATAGTTT
TGATAAACTGTGTGAATGGATGGAAGGTGCAAGCGAACATGAGCCACTTC
TGCTAAAGGAAGTATATGCAAAGCTTGTAGAAATGAGTGGAGACTCTAAC
AGCTGTTACAGTTCTAAGCAGCTGCGAAGAAAGCTGAAGGATCGTTACCA
AGatcatttaatatttattgaaGAAGATGGAAGATCGAGTATGTTGTGCT
TTAAAGACTTTGCTTGGTTTATAATGAACGACTTCAAGAAAAACCATTCC
CCGACTCCGGGTTCAATAATGACAGCAGCTGCAAAAATAATAAAGTCAGA
ATTCCGTCAAATGGCATCCAACAAGTCTCACTATCCTGACATAGAAAAGA
TTACGGACATGGAATACTTGAAGAAATGGATCCCAGAAAGTTTACTTGGG
CTATTAAAGGAGCTCATCCCATCAGAACTAAAGCAAGTCAGCATTGGCCA
ATGTATATCACAATCAGCTAAACCAAGGTCAATGTTGGCACCAATTCCTT
TTGGCATTGGAGTAGATGTTGATAGATCTTTCGAATCCAAATGGTTCATA
AACCACCTGGCTAAACTTGGCTTCTCCGTTTCATATGATGAAGTAACAAA
CTTTAAGAGGTCAGCTGCTTCAGCTTCTGAAGGTGATGGTCCAGTTGAAG
GTGGTGGTCCAGTTGAAGgtggtggtCCAGTTGAAGGTCGTGTTTCCGTT
GAAGGTGGTGTTTCCGTTGAAGGTGGTGTTCCCGTTGAAGGTCGTGTTTC
CGTTGAAGGTGGTGTTTCCGTTGAAGGTGGTGTTCCCGTTGAAGCTGGTG
TTTCCGCAGGAACAATAAACAACTTTTTTGAGCAATATGCAGCCGATAAC
ATGGATAATAATCTGAGAACTCTAACAGGAAAGGGTACGTTTCACGGGAT
GGGGATAATCTCCATGTCTACAAATGGTGCAAAAACATTCCAAGCAATCA
GACGTTTGaagaaaaacgagaaaaaacaAACGACGGGATCCGTACCAATC
ATTCCTTATTTTGGATCTCATGAACGTGGCTTGTCAAAGCTAAGATTCAA
AAAGATTAAAGATCTTTCTGAGAGTTTCAAAGATGACGTCATGCACTATT
ACCAAGAGAAGACCATCGACCTTGTATGGCAATTAGCATGGCACTTTAAA
ACCCGAGAATCTGCTAGACCGAATTGGCAAGGATTTATGCAGACTGCGGC
AGTACCAGAAAATAGCGACAATCCCGTGTCAAAGTCGTCCATAACATTCT
TACCCATCATCGACCTCAGTTCATCTGACGAAACTTGCTTATACTCAACA
CTTCTATTCATTAAAGACGAAGCAAAGAAGCACAAAATTGAAGTACCCTG
TATCACCTTTGATCAGCCTCTATGGCAGAAAGCTATCGGGATGGATGATG
GTCATATTACCGTCAAGAAGCGGTTGAGATCATCAGTTGGAGCGATGGGT
TCATTCAACTGGAAGTTGCATTGCATTTACTGCGGTGAACAAAAAGATGA
AAAGCGGAAAAGTAATGAAGTCAGCGAGGTGGAAACAATTCCGATCAAAA
GAAGCATCCTAGCACAATGCGATGCAAGGAATGATGAATGGGGAGACTTA
GTCCGTGACCGTGTATTACCATCCATCGATATTGTAGCAGACGAAGGATT
CTATCATCGCTCGTGTAtggaaaagttttttacaaTCAAGTCAGGAAAGA
AATCTGGACGTCCTGTTAACGAATTGATGCAGGATAGTTTTGATAAACTG
TGTGAATGGATGGAAGGTGCAAGCGAACATGAGCCACTTCTGCTAAAGGA
AGTATATGCAAAGCTTGTAGAAATGAGTGGAGACTCTAACAGCTGTTACA
GTTCTAAGCAGCTGCGAAGAAAGCTGAAGGATCGTTACCAAGatcattta
atatttattgaaGAAGATGGAAGATCGAGTATGTTGTGCTTTAAAGACTT
TGCTTGGTTTATAATGAACGACTTCAAGAAAAACCATTCCCCGACTCCGG
GTTCAATAATGACAGCAGCTGCAAAAATAATAAAGTCAGAATTCCGTCAA
ATGGCATCCAACAAGTCTCACTATCCTGACATAGAAAAGATTACGGACAT
GGAATACTTGAAGAAATGGATCCCAGAAAGTTTACTTGGGCTATTAAAGG
AGCTCATCCCATCAGAACTAAAGCAAGTCAGCATTGGCCAATGTATATCA
CAATCAGCTAAACCAAGGTCAATGTTGGCACCAATTCCTTTTGGCATTGG
AGTAGATGTTGATAGATCTTTCGAATCCAAATGGTTCATAAACCACCTGG
CTAAACTTGGCTTCTCCGTTTCATATGATGAAGTAACAAACTTTAAGAGG
TCAGCTGCTTCAGCTTCTGAAGGTGATGGTCCAGTTGAAGGTGGTGGTCC
AGTTGAAGgtggtggtCCAGTTGAAGGTCGTGTTTCCGTTGAAGGTGGTG
TTTCCGTTGAAGGTGGTGTTCCCGTTGAAGGTCGTGTTTCCGTTGAAGGT
GGTGTTTCCGTTGAAGGTGGTGTTCCCGTTGAAGCTGGTGTTTCCGCAGG
AACAATAAACAACTTTTTTGAGCAATATGCAGCCGATAACATGGATAATA
ATCTGAGAACTCTAACAGGAAAGGGTACGTTTCACGGGATGGGGATAATC
TCCATGTCTACAAATGGTGCAAAAACATTCCAAGCAATCAGACGTTTGaa
gaaaaacgagaaaaaacaAACGACGGGATCCGTACCAATCATTCCTTATT
TTGGATCTCATGAACGTGGCTTGTCAAAGCTAAGATTCAAAAAGATTAAA
GATCTTTCTGAGAGTTTCAAAGATGACGTCATGCACTATTACCAAGAGAA
GACCATCGACCTTGTATGGCAATTAGCATGGCACTTTAAAACCCGAGAAT
CTGCTAGACCGAATTGGCAAGGATTTATGCAGACTGCGGCAGTACCAGAA
AATAGCGACAATCCCGTGTCAAAGTCGTCCATAACATTCTTACCCATCAT
CGACCTCAGTTCATCTGACGAAACTTGCTTATACTCAACACTTCTATTCA
TTAAAGACGAAGCAAAGAAGCACAAAATTGAAGTACCCTGTATCACCTTT
GATCAGCCTCTATGGCAGAAAGCTATCGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| sc0000117_pilon | genome | sc0000117_pilon:808392..811862 + |
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