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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:808332..811862+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14226.1.p1 ID=MSTRG.14226.1.p1|Name=MSTRG.14226.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=3531bp|location=Sequence derived from alignment at sc0000117_pilon:808332..811862+ (Clytia hemisphaerica_ch_hm2_pilon)
GAAAATATGTAAGTGTAGGTCTACGGCTAGTTAAAGGTTGCTTCGACGAT
GACTTGTTATGGCCAATGAGAGCTCGTGTCCGATGTTCAATTGTGACAAA
TCTAACGGACGATATAGAGCTATAGTCCGGTAGAATTAGCCTGAGACCTG
GACAAAATTCCCaacaagctgaaattttgcacagaggtccCCAATAGGAT
ACTTGAccaccaaaaaaaaagccccatcGATTCGGACatgggaaaacttt
ttacgGACGATTTAATTTCGGACACGTCcgaaaaataaacttgaaaaaaa
agttctcaaAATATGCAAGTgtcatatatcaaaagaaagataatttcaat
acgaacaaaaaaattgCCTACAGGAAAGCCTGGAAATCATCTCACAAAGA
GTTAGGAGACCTCGAATACATCAtggttttcatcttctttttatattatg
tttaaattctttaaaattactATTATGTTTAAGTTTGTATGAGTATGATT
TTTAGGTTCAAAATACGATTTTAAGAGATTGAACACTCACAAAGatcttt
ttcattatttttgatgCCATTGCAGTGTAAatatgtaaacattcgaatgc
GAATAAGTGTTATTTACATTCATCAATTCATCAACTTGACAACTCCTGAA
aggtatatttttcattttttgaaaagtaactTTTAACATGATCTGTGTAT
ATATTTCATCTGTTTTTATTTAgagtaaaaatgaaagaaatattaaaagt
ttaaatAAAAGTGGTGTATTGTAGAATGGCTACATTGGGCAGAGTATGCA
TTTTATGTGAAGAAGATGTTCAGCCAGACAATCTAGTTGAAGTCAAGAAA
AAAGGCTTCGACAGACTCGTTCAAGTTGCCAAACAAAGAAAGCTCGAAGA
TTTGCACAGGTTTTTATATCTCAGTAGTTTTAAGAAAAGGCCCAGGAAGT
GTGTAAATTAGATTCATTAGAACCTTAGAAGTATAGAGTTTTCGACAGTC
CCTTTTAATAGTTTACTACAAGGTTGGGTTTAGGTTTTTTAAGGTTCATC
TTCTTCCGATGTTTATCAGCATAGTAATGTCAGGATTTTTTAACCTGAGA
ACAGATGTGGAGTTTTCTTAATgcgacacgctgaagctctaaagatcgct
gaaaactaacatctgaggaaaatggtcatgtttctatgaaaaaatttcag
tcagaaaTTTGTCTTGTGCCAAAAGCGCCAATATTAAAAACTTGCTGAGA
TGCAGATGGCATATTCTTCAGATTGAATATTTTCGCCCacgtctttagag
ctttagcgtactgAGCCAGATAATACggaatctgttatcaggttaggatT
TTTGAACAAGGGTAGATCAAATAGGTACTCTTGAGaagaaaattttagtt
ttaaggCTCATAACCAttacggctagttcgaaacacagATCACAGGTCAT
AGTTCACTTCCTCATCTAAAACATACTTTATACGAGTATGTTCTAATACC
ACTTATTGTATTAGAACATACGTTATAGACATTTCTAACAATAACTATGA
TTTGTTAATCTTATTTACAGCAACTTGAAGGAACGGGAGGTTGGAAACGT
CTACGTCCATCATGACTGTAGGAgaaagtttgtggacaaaagGAAAATGG
ATGATGGTCATATTACCGTCAAGAAGCGGTTGAGATCATCAGTTGGAGCG
ATGGGTTCATTCAACTGGAAGTTGCATTGCATTTACTGCGGTGAACAAAA
AGATGAAAAGCGGAAAAGTAATGAAGTCAGCGAGGTGGAAACAATTCCGA
TCAAAAGAAGCATCCTAGCACAATGCGATGCAAGGAATGATGAATGGGGA
GACTTAGTCCGTGACCGTGTATTACCATCCATCGATATTGTAGCAGACGA
AGGATTCTATCATCGCTCGTGTAtggaaaagttttttacaaTCAAGTCAG
GAAAGAAATCTGGACGTCCTGTTAACGAATTGATGCAGGATAGTTTTGAT
AAACTGTGTGAATGGATGGAAGGTGCAAGCGAACATGAGCCACTTCTGCT
AAAGGAAGTATATGCAAAGCTTGTAGAAATGAGTGGAGACTCTAACAGCT
GTTACAGTTCTAAGCAGCTGCGAAGAAAGCTGAAGGATCGTTACCAAGat
catttaatatttattgaaGAAGATGGAAGATCGAGTATGTTGTGCTTTAA
AGACTTTGCTTGGTTTATAATGAACGACTTCAAGAAAAACCATTCCCCGA
CTCCGGGTTCAATAATGACAGCAGCTGCAAAAATAATAAAGTCAGAATTC
CGTCAAATGGCATCCAACAAGTCTCACTATCCTGACATAGAAAAGATTAC
GGACATGGAATACTTGAAGAAATGGATCCCAGAAAGTTTACTTGGGCTAT
TAAAGGAGCTCATCCCATCAGAACTAAAGCAAGTCAGCATTGGCCAATGT
ATATCACAATCAGCTAAACCAAGGTCAATGTTGGCACCAATTCCTTTTGG
CATTGGAGTAGATGTTGATAGATCTTTCGAATCCAAATGGTTCATAAACC
ACCTGGCTAAACTTGGCTTCTCCGTTTCATATGATGAAGTAACAAACTTT
AAGAGGTCAGCTGCTTCAGCTTCTGAAGGTGATGGTCCAGTTGAAGGTGG
TGGTCCAGTTGAAGGTGGTGTTTCCGTTGAAGGTGATGGTCCAGCCGAAG
GTGATGGTCCAGCCGAAGGTGGTGTTCCCGTTGAAGGTGGTGGTCTAGTT
GAaggtggtgtttccgttgaaggtggtggtccagttgaaggtggtgtttt
cgttgaaggtggtggtCCAGTTGAAGGTCGTGTTTCCGTTGAAGGTGGTG
TTTCCGTTGAAGGTGGTGTTCCCGTTGAAGGTCGTGTTTCCGTTGAAGGT
GGTGTTTCCGTTGAAGGTGGTGTTCCCGTTGAAGCTGGTGTTTCCGCAGG
AACAATAAACAACTTTTTTGAGCAATATGCAGCCGATAACATGGATAATA
ATCTGAGAACTCTAACAGGAAAGGGTACGTTTCACGGGATGGGGATAATC
TCCATGTCTACAAATGGTGCAAAAACATTCCAAGCAATCAGACGTTTGaa
gaaaaacgagaaaaaacaAACGACGGGATCCGTACCAATCATTCCTTATT
TTGGATCTCATGAACGTGGCTTGTCAAAGCTAAGATTCAAAAAGATTAAA
GATCTTTCTGAGAGTTTCAAAGATGACGTCATGCACTATTACCAAGAGAA
GACCATCGACCTTGTATGGCAATTAGCATGGCACTTTAAAACCCGAGAAT
CTGCTAGACCGAATTGGCAAGGATTTATGCAGACTGCGGCAGTACCAGAA
AATAGCGACAATCCCGTGTCAAAGTCGTCCATAACATTCTTACCCATCAT
CGACCTCAGTTCATCTGACGAAACTTGCTTATACTCAACACTTCTATTCA
TTAAAGACGAAGCAAAGAAGCACAAAATTGAAGTACCCTGTATCACCTTT
GATCAGCCTCTATGGCAGAAAGCTATCGGGA Coding sequence (CDS) from alignment at sc0000117_pilon:808332..811862+ >MSTRG.14226.1.p1 ID=MSTRG.14226.1.p1|Name=MSTRG.14226.1.p1|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=5274bp|location=Sequence derived from alignment at sc0000117_pilon:808332..811862+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGGATGATGGTCATATTACCGTCAAGAAGCGGTTGAGATCATCAGTTGG
AGCGATGGGTTCATTCAACTGGAAGTTGCATTGCATTTACTGCGGTGAAC
AAAAAGATGAAAAGCGGAAAAGTAATGAAGTCAGCGAGGTGGAAACAATT
CCGATCAAAAGAAGCATCCTAGCACAATGCGATGCAAGGAATGATGAATG
GGGAGACTTAGTCCGTGACCGTGTATTACCATCCATCGATATTGTAGCAG
ACGAAGGATTCTATCATCGCTCGTGTAtggaaaagttttttacaaTCAAG
TCAGGAAAGAAATCTGGACGTCCTGTTAACGAATTGATGCAGGATAGTTT
TGATAAACTGTGTGAATGGATGGAAGGTGCAAGCGAACATGAGCCACTTC
TGCTAAAGGAAGTATATGCAAAGCTTGTAGAAATGAGTGGAGACTCTAAC
AGCTGTTACAGTTCTAAGCAGCTGCGAAGAAAGCTGAAGGATCGTTACCA
AGatcatttaatatttattgaaGAAGATGGAAGATCGAGTATGTTGTGCT
TTAAAGACTTTGCTTGGTTTATAATGAACGACTTCAAGAAAAACCATTCC
CCGACTCCGGGTTCAATAATGACAGCAGCTGCAAAAATAATAAAGTCAGA
ATTCCGTCAAATGGCATCCAACAAGTCTCACTATCCTGACATAGAAAAGA
TTACGGACATGGAATACTTGAAGAAATGGATCCCAGAAAGTTTACTTGGG
CTATTAAAGGAGCTCATCCCATCAGAACTAAAGCAAGTCAGCATTGGCCA
ATGTATATCACAATCAGCTAAACCAAGGTCAATGTTGGCACCAATTCCTT
TTGGCATTGGAGTAGATGTTGATAGATCTTTCGAATCCAAATGGTTCATA
AACCACCTGGCTAAACTTGGCTTCTCCGTTTCATATGATGAAGTAACAAA
CTTTAAGAGGTCAGCTGCTTCAGCTTCTGAAGGTGATGGTCCAGTTGAAG
GTGGTGGTCCAGTTGAAGGTGGTGTTTCCGTTGAAGGTGGTGGTCTAGTT
GAaggtggtgtttccgttgaaggtggtggtccagttgaaggtggtgtttt
cgttgaaggtggtggtCCAGTTGAAGGTCGTGTTTCCGTTGAAGGTGGTG
TTTCCGTTGAAGCTGGTGTTTCCGCAGGAACAATAAACAACTTTTTTGAG
CAATATGCAGCCGATAACATGGATAATAATCTGAGAACTCTAACAGGAAA
GGGTACGTTTCACGGGATGGGGATAATCTCCATGTCTACAAATGGTGCAA
AAACATTCCAAGCAATCAGACGTTTGaagaaaaacgagaaaaaacaAACG
ACGGGATCCGTACCAATCATTCCTTATTTTGGATCTCATGAACGTGGCTT
GTCAAAGCTAAGATTCAAAAAGATTAAAGATCTTTCTGAGAGTTTCAAAG
ATGACGTCATGCACTATTACCAAGAGAAGACCATCGACCTTGTATGGCAA
TTAGCATGGCACTTTAAAACCCGAGAATCTGCTAGACCGAATTGGCAAGG
ATTTATGCAGACTGCGGCAGTACCAGAAAATAGCGACAATCCCGTGTCAA
AGTCGTCCATAACATTCTTACCCATCATCGACCTCAGTTCATCTGACGAA
ACTTGCTTATACTCAACACTTCTATTCATTAAAGACGAAGCAAAGAAGCA
CAAAATTGAAGTACCCTGTATCACCTTTGATCAGCCTCTATGGCAGAAAG
CTATCGGGATGGATGATGGTCATATTACCGTCAAGAAGCGGTTGAGATCA
TCAGTTGGAGCGATGGGTTCATTCAACTGGAAGTTGCATTGCATTTACTG
CGGTGAACAAAAAGATGAAAAGCGGAAAAGTAATGAAGTCAGCGAGGTGG
AAACAATTCCGATCAAAAGAAGCATCCTAGCACAATGCGATGCAAGGAAT
GATGAATGGGGAGACTTAGTCCGTGACCGTGTATTACCATCCATCGATAT
TGTAGCAGACGAAGGATTCTATCATCGCTCGTGTAtggaaaagtttttta
caaTCAAGTCAGGAAAGAAATCTGGACGTCCTGTTAACGAATTGATGCAG
GATAGTTTTGATAAACTGTGTGAATGGATGGAAGGTGCAAGCGAACATGA
GCCACTTCTGCTAAAGGAAGTATATGCAAAGCTTGTAGAAATGAGTGGAG
ACTCTAACAGCTGTTACAGTTCTAAGCAGCTGCGAAGAAAGCTGAAGGAT
CGTTACCAAGatcatttaatatttattgaaGAAGATGGAAGATCGAGTAT
GTTGTGCTTTAAAGACTTTGCTTGGTTTATAATGAACGACTTCAAGAAAA
ACCATTCCCCGACTCCGGGTTCAATAATGACAGCAGCTGCAAAAATAATA
AAGTCAGAATTCCGTCAAATGGCATCCAACAAGTCTCACTATCCTGACAT
AGAAAAGATTACGGACATGGAATACTTGAAGAAATGGATCCCAGAAAGTT
TACTTGGGCTATTAAAGGAGCTCATCCCATCAGAACTAAAGCAAGTCAGC
ATTGGCCAATGTATATCACAATCAGCTAAACCAAGGTCAATGTTGGCACC
AATTCCTTTTGGCATTGGAGTAGATGTTGATAGATCTTTCGAATCCAAAT
GGTTCATAAACCACCTGGCTAAACTTGGCTTCTCCGTTTCATATGATGAA
GTAACAAACTTTAAGAGGTCAGCTGCTTCAGCTTCTGAAGGTGATGGTCC
AGTTGAAGGTGGTGGTCCAGTTGAAGGTGGTGTTTCCGTTGAAGGTGGTG
GTCTAGTTGAaggtggtgtttccgttgaaggtggtggtccagttgaaggt
ggtgttttcgttgaaggtggtggtCCAGTTGAAGGTCGTGTTTCCGTTGA
AGGTGGTGTTTCCGTTGAAGCTGGTGTTTCCGCAGGAACAATAAACAACT
TTTTTGAGCAATATGCAGCCGATAACATGGATAATAATCTGAGAACTCTA
ACAGGAAAGGGTACGTTTCACGGGATGGGGATAATCTCCATGTCTACAAA
TGGTGCAAAAACATTCCAAGCAATCAGACGTTTGaagaaaaacgagaaaa
aacaAACGACGGGATCCGTACCAATCATTCCTTATTTTGGATCTCATGAA
CGTGGCTTGTCAAAGCTAAGATTCAAAAAGATTAAAGATCTTTCTGAGAG
TTTCAAAGATGACGTCATGCACTATTACCAAGAGAAGACCATCGACCTTG
TATGGCAATTAGCATGGCACTTTAAAACCCGAGAATCTGCTAGACCGAAT
TGGCAAGGATTTATGCAGACTGCGGCAGTACCAGAAAATAGCGACAATCC
CGTGTCAAAGTCGTCCATAACATTCTTACCCATCATCGACCTCAGTTCAT
CTGACGAAACTTGCTTATACTCAACACTTCTATTCATTAAAGACGAAGCA
AAGAAGCACAAAATTGAAGTACCCTGTATCACCTTTGATCAGCCTCTATG
GCAGAAAGCTATCGGGATGGATGATGGTCATATTACCGTCAAGAAGCGGT
TGAGATCATCAGTTGGAGCGATGGGTTCATTCAACTGGAAGTTGCATTGC
ATTTACTGCGGTGAACAAAAAGATGAAAAGCGGAAAAGTAATGAAGTCAG
CGAGGTGGAAACAATTCCGATCAAAAGAAGCATCCTAGCACAATGCGATG
CAAGGAATGATGAATGGGGAGACTTAGTCCGTGACCGTGTATTACCATCC
ATCGATATTGTAGCAGACGAAGGATTCTATCATCGCTCGTGTAtggaaaa
gttttttacaaTCAAGTCAGGAAAGAAATCTGGACGTCCTGTTAACGAAT
TGATGCAGGATAGTTTTGATAAACTGTGTGAATGGATGGAAGGTGCAAGC
GAACATGAGCCACTTCTGCTAAAGGAAGTATATGCAAAGCTTGTAGAAAT
GAGTGGAGACTCTAACAGCTGTTACAGTTCTAAGCAGCTGCGAAGAAAGC
TGAAGGATCGTTACCAAGatcatttaatatttattgaaGAAGATGGAAGA
TCGAGTATGTTGTGCTTTAAAGACTTTGCTTGGTTTATAATGAACGACTT
CAAGAAAAACCATTCCCCGACTCCGGGTTCAATAATGACAGCAGCTGCAA
AAATAATAAAGTCAGAATTCCGTCAAATGGCATCCAACAAGTCTCACTAT
CCTGACATAGAAAAGATTACGGACATGGAATACTTGAAGAAATGGATCCC
AGAAAGTTTACTTGGGCTATTAAAGGAGCTCATCCCATCAGAACTAAAGC
AAGTCAGCATTGGCCAATGTATATCACAATCAGCTAAACCAAGGTCAATG
TTGGCACCAATTCCTTTTGGCATTGGAGTAGATGTTGATAGATCTTTCGA
ATCCAAATGGTTCATAAACCACCTGGCTAAACTTGGCTTCTCCGTTTCAT
ATGATGAAGTAACAAACTTTAAGAGGTCAGCTGCTTCAGCTTCTGAAGGT
GATGGTCCAGTTGAAGGTGGTGGTCCAGTTGAAGGTGGTGTTTCCGTTGA
AGGTGGTGGTCTAGTTGAaggtggtgtttccgttgaaggtggtggtccag
ttgaaggtggtgttttcgttgaaggtggtggtCCAGTTGAAGGTCGTGTT
TCCGTTGAAGGTGGTGTTTCCGTTGAAGCTGGTGTTTCCGCAGGAACAAT
AAACAACTTTTTTGAGCAATATGCAGCCGATAACATGGATAATAATCTGA
GAACTCTAACAGGAAAGGGTACGTTTCACGGGATGGGGATAATCTCCATG
TCTACAAATGGTGCAAAAACATTCCAAGCAATCAGACGTTTGaagaaaaa
cgagaaaaaacaAACGACGGGATCCGTACCAATCATTCCTTATTTTGGAT
CTCATGAACGTGGCTTGTCAAAGCTAAGATTCAAAAAGATTAAAGATCTT
TCTGAGAGTTTCAAAGATGACGTCATGCACTATTACCAAGAGAAGACCAT
CGACCTTGTATGGCAATTAGCATGGCACTTTAAAACCCGAGAATCTGCTA
GACCGAATTGGCAAGGATTTATGCAGACTGCGGCAGTACCAGAAAATAGC
GACAATCCCGTGTCAAAGTCGTCCATAACATTCTTACCCATCATCGACCT
CAGTTCATCTGACGAAACTTGCTTATACTCAACACTTCTATTCATTAAAG
ACGAAGCAAAGAAGCACAAAATTGAAGTACCCTGTATCACCTTTGATCAG
CCTCTATGGCAGAAAGCTATCGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:808332..811862 + |
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