MSTRG.14223.1.p4 (mRNA) -

Overview
NameMSTRG.14223.1.p4
Unique NameMSTRG.14223.1.p4
TypemRNA
OrganismClytia hemisphaerica_ch_hm2_pilon (Jellyfish)

Sequence
The following sequences are available for this feature:

mRNA from alignment at sc0000117_pilon:793223..795786-

Legend: exonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>MSTRG.14223.1.p4 ID=MSTRG.14223.1.p4|Name=MSTRG.14223.1.p4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=2564bp|location=Sequence derived from alignment at sc0000117_pilon:793223..795786- (Clytia hemisphaerica_ch_hm2_pilon)
TTTTCAAAGAATGTTTAAAATCTCTCTGACAACTCCTTTCACTGACATTT
CAGGTCTTTTGGTGCATCCAATCAAAGGAAGTGTTGAAAATGAATTATCC
AAGGATCCAGTGGACGAAAATGTGTTCGATCGCATTCAACTCATCAATGG
AGACGATGGTAAGAAAAATCTCATTTGAAAAATCTTGACTTTGATCTTTA
GACCATTGTACTGAAAATGCGAATTTCAGGATGCAAATCCTCTGTTTCCT
TTTCATGGTTAAAAACAAACAGTTCCTCTCAAAAAGATTTCAAATCTTTC
ATTTAGATCATTTTGAAGGCGATATTGTCATGTCAACAGAAGATGTCGAA
AAATTGCTGAGTCAGCGAGAACGAAAACGACGAGAGGTTGTTTCGAGCAC
ATTGTTGTTATGGCCGAACGGAGTTGTTCCCTATAATTTTAGCAACGGAT
TTCGTAAGTACATTTTGCAAATTTAAACAAAATCTGAAAAAAACATATTG
ACGCTATTTTCTGTATGGACCAATCTTGTCCCAAAATCATTTAACCAAAA
CTTTTCGTTTCGTTTGAACACCAAAATAATCTTGTAGATTGAATCTCGAT
ATCTTTTATTTCAGCATATGAAAAACAAGTGAAAGAAGCGATGCGAGAAG
TGGAAAGGTTGACTTGCATCCGATTCGTACCCAGGACTACACAAAGAGGA
TATGTCGAGTTCATCCGAGGATATGGGTAAGAAGGCTACTCCAAAATTCA
CAACTAGCGATAACCTTTCAGTCTCTCAGTCATGAAAACTTAATAGTATC
TGTGACAAAGGTTTGATTTTTTCCTTATATTTTAGTCAAAAACACCCTCT
AACAAACAAGAAATTTGTCTTTTAGATGTTATTCAGAGATCGGATATAAA
CGCCGCCAGCAACGAATTTCAATCGGTAGCGGATACCAATGGAAAGGCGT
TATCATCCATGAGATTCTTCACGCTGTTGGTTTCTACCACGAACAATCGA
GATTGGACAGAGATCAATATCTTCATATCAACTGGGATAACATCGATACA
AGTAAGAACTTTCTCTAAAATATCCATTTCGTTTTGCATTTAAATCTAAT
CTATAAACATGTCATACCATTTCCATATAAAGTCTACTAAAGATCGGATG
CTCTCAGAGAGGATTGACGAATTAAATTATCAAACCATTTATTTTACAAT
TTCAGGAAACAAAAGAAACTTCCAGAAATACGATCGCGGTGTTGCTGAAT
CCTTCGGCGAAAAATACGACAAAGGATCAGTCATGCAATATGGAAAGTAA
GTAGACTTTTAAATCGAAAGTTCGAAAATTATCATTTCTACATGACGTTC
TAAAGGCCATGCATTTCTACAATTCGAAACAAATTCGATAGGATGGCGCA
TATTGAGGTCTTTATTGGCTTAAACTCAAAAAAGCCGTTGCCAGCTGCTA
TACCGCATCGACATAAAAGAAGGAACCTAAAATAAAGTATAATGAACTTG
AATTTGACCTAAAGTTTCGACACAACCAACTATAATGTTTCAAATAAAAA
AATACTCATTAATAAATCCTTTATCAGACAAGCTCAAAAATATTTCAAAT
TTTTCCCATCTTTCCAGCTACGCGTTTGCGATCAACATACGTCTGATGAC
CATTGTCTCCAAGTCTGATGCTAAAGAAAGGTTGGGGCAACGTAGAGGGA
TGTCATCAAGCGATATCCGACAATTGAACATGAGATATGGATGTGGTGAC
GTCACTCCACCGCCCACAACCACCACCACAGTGGATCCAAGTTGTGTCGA
TAAGGAAAGATATTGTAAAAGGAGTGACATCGACTTATACTGCCATAAAA
GTTTTATGGTTAGGGACAGTTGTCAACGCTCTTGCAACAATTGTCCACAA
AAGCCAGCGACAACAACTTCTAAAATAATAACCACTCCAACCACAACATC
AACCACTCCAGCTACGACAACGACCACCCCTAAAACGACCACGACCGCGC
CAACAACAACTACAACGACCACCACTTCAACTACTACTTCTCCTACCACG
ACCATACCAACAACTACTACGACAACCACCGCTAGAACGACAACACGTCA
CAATTCAAATCGACCACCCCTACTGCTAAAACGACGACCATCCCTTCTGC
TATAACGACGACCACCCCTTCCACTAAAATGACGACCACTCCTGCTAAAA
CGACGACCACCCCTACTGCTAAAACGACGACCACCCCTACTGCTAAAACG
ACGGCCATCCCTTCTGCTAAAACGACGGCCATCCCTTCTGCTAAAACGAC
GGCCATCCCTTCTGCTAAAACGACGACCACCCCTACTGCTAAAACGACGA
CCATTCCTTCTGCCAAAACGACGGCCATCCTTTCTGCTAAAACGACGGCC
ATCCCTTCTGCTAAAACGGCGACCATCCCTTCTGCTAAAACGACGACCAC
TCCTTCTGCTAAAACGACGACCACTCCTTCTGCTAAAACGACGACCATCC
CTTCTGCTAAAACGACGACCATCCCTTCTGCTAAAACGACGGCCATCCCT
TCTGCTAAAACGAC

Coding sequence (CDS) from alignment at sc0000117_pilon:793223..795786-

>MSTRG.14223.1.p4 ID=MSTRG.14223.1.p4|Name=MSTRG.14223.1.p4|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=1260bp|location=Sequence derived from alignment at sc0000117_pilon:793223..795786- (Clytia hemisphaerica_ch_hm2_pilon)
CATATGAAAAACAAGTGAAAGAAGCGATGCGAGAAGTGGAAAGGTTGACT
TGCATCCGATTCGTACCCAGGACTACACAAAGAGGATATGTCGAGTTCAT
CCGAGGATATGGGTAAATCATTTTGAAGGCGATATTGTCATGTCAACAGA
AGATGTCGAAAAATTGCTGAGTCAGCGAGAACGAAAACGACGAGAGGTTG
TTTCGAGCACATTGTTGTTATGGCCGAACGGAGTTGTTCCCTATAATTTT
AGCAACGGATTTCTTTCAAAGAATGTTTAAAATCTCTCTGACAACTCCTT
TCACTGACATTTCAGGTCTTTTGGTGCATCCAATCAAAGGAAGTGTTGAA
AATGAATTATCCAAGGATCCAGTGGACGAAAATGTGTTCGATCGCATTCA
ACTCATCAATGGAGACGATGCATATGAAAAACAAGTGAAAGAAGCGATGC
GAGAAGTGGAAAGGTTGACTTGCATCCGATTCGTACCCAGGACTACACAA
AGAGGATATGTCGAGTTCATCCGAGGATATGGGTAAATCATTTTGAAGGC
GATATTGTCATGTCAACAGAAGATGTCGAAAAATTGCTGAGTCAGCGAGA
ACGAAAACGACGAGAGGTTGTTTCGAGCACATTGTTGTTATGGCCGAACG
GAGTTGTTCCCTATAATTTTAGCAACGGATTTCTTTCAAAGAATGTTTAA
AATCTCTCTGACAACTCCTTTCACTGACATTTCAGGTCTTTTGGTGCATC
CAATCAAAGGAAGTGTTGAAAATGAATTATCCAAGGATCCAGTGGACGAA
AATGTGTTCGATCGCATTCAACTCATCAATGGAGACGATGCATATGAAAA
ACAAGTGAAAGAAGCGATGCGAGAAGTGGAAAGGTTGACTTGCATCCGAT
TCGTACCCAGGACTACACAAAGAGGATATGTCGAGTTCATCCGAGGATAT
GGGTAAATCATTTTGAAGGCGATATTGTCATGTCAACAGAAGATGTCGAA
AAATTGCTGAGTCAGCGAGAACGAAAACGACGAGAGGTTGTTTCGAGCAC
ATTGTTGTTATGGCCGAACGGAGTTGTTCCCTATAATTTTAGCAACGGAT
TTCTTTCAAAGAATGTTTAAAATCTCTCTGACAACTCCTTTCACTGACAT
TTCAGGTCTTTTGGTGCATCCAATCAAAGGAAGTGTTGAAAATGAATTAT
CCAAGGATCCAGTGGACGAAAATGTGTTCGATCGCATTCAACTCATCAAT
GGAGACGATG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
MSTRG.14223MSTRG.14223Clytia hemisphaerica_ch_hm2_pilongene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14223.1.p4MSTRG.14223.1.p4-proteinClytia hemisphaerica_ch_hm2_pilonpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
MSTRG.14223.1.p4.exon5MSTRG.14223.1.p4.exon5Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14223.1.p4.exon4MSTRG.14223.1.p4.exon4Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14223.1.p4.exon3MSTRG.14223.1.p4.exon3Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14223.1.p4.exon2MSTRG.14223.1.p4.exon2Clytia hemisphaerica_ch_hm2_pilonexon
MSTRG.14223.1.p4.exon1MSTRG.14223.1.p4.exon1Clytia hemisphaerica_ch_hm2_pilonexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000117_pilongenomesc0000117_pilon:793223..795786 -