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Sequence
The following sequences are available for this feature:
mRNA from alignment at sc0000117_pilon:779575..784583+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >MSTRG.14219.2.p2 ID=MSTRG.14219.2.p2|Name=MSTRG.14219.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=mRNA|length=5009bp|location=Sequence derived from alignment at sc0000117_pilon:779575..784583+ (Clytia hemisphaerica_ch_hm2_pilon)
TCTTATCCATTGATGTGCCTCGCGAGAAGAGAGAAAAGAATTAAAGAACA
CGAATAATTTTTGTATTACAGCTTGGTTATGTGTAAAGAATGTGTTATAA
ATCCATTTCCAAATCGAAATAAAACATGCTTGGAATCAGGATCCTACTTG
ATCAATTTTAAAGgtaaaacaaatttattttctagtCTAGCATAGCTTAG
CTAGCTTGGTATGTCTTTTTTATTCTAAATCAGAGGAAGTGGTATTAGAT
TTTAAAGGTTTGTAAGGTAAAAGGTATGTCAGAGACGAAAGTAGCTAATC
GAGCCTTTAACTGTaagagaaaaaacatttttgatttgattgagaCCCTT
TGGCTTTGAAAAAGATTCTTGCCAAGATTTTGGGCGACTTTTggtcaaga
ttttttaaaatcgCGAGCCTTTAAGAGGGGATTTCtcaattttagtgatt
ttgtgACCCTTCTAGAGACTAACCTACGAATTTGTACCACTTTGAGGGTG
TTTTGAAGTACGAAAAGGATCGatagacccgggggggggtactgggttta
cggactgacggtatgtgtgggccaaaaattggcttttaaaattgcaccct
tacagtgcagcaaaaatgagtgaaaatcatacccctagagcattttcccc
caaattttcgatccctttcgtgcaaaaatggtcaaaattctagcattttt
ggtcaaaatatctagatttttcaagagttttctgaaatttctacccttac
tgtgcatctctagtttttccgacccttacagtgcatattggaaaaggtac
ccttaggacccacacatacccgtcggtcgttttgcccagctgcccctccc
cctccccccgggtggtagaccttttgctattcAGCAGGATGTCATGTATA
TGATGTATATGTTGAATAACTACAGGGGGTTTGTAGGGATTCGAAACACC
ATTTACCCGGGTGAGTCCTGGAATCGGGGGCAAAAAGATGTGGGATGGGA
TGCGCCGCTTGGTTAGGGTACCTTTATTTATCTTCTCACCTCCATGAGTC
CACAGTAGGGCAGGGtctcaaaaacaacaaattaaagaaattagTCCTTC
TTAAGGTACGTTTTTGGGGGAATTACATCATCATCTTCAGCCTCATCATA
GACATATTCATATGTCTAtggtcccattcagggtcacattttcgaacctc
agcgacACACCCCGTCAATATTTGATATTTCCTAGCTCGAATGATTGCAG
ATTCCGCCTTGAAACAAGCGAATTTTTAAGAGTGGGACAACATACATTAA
AACACAGATTCGGTgagatttttcagccagtgggggtagaAATAGCTgac
caaaactcaatggggattgatattcccatttcGGTCATGACTGGGGATTC
GAATTCCATTGtttctgagcaagaaaattcagtgggggtggaaaaaatac
cAGAATAATTTGCAGTAAGGATtagcttatctgattattttcagcgaggA
CAtaaattttccaccggggacgatattttggccgatttttccagtgggaa
ggattcccagtggggctgtgagaaAAAGGGGTGTATCAAATTTTCATACA
ATATGGCAGTTTATCGGacaataaaacataaaataccAAATAGTATGACG
AAGGGTaaaacacccggagaaaaaattaaaatcaaatttagaaaaatcat
tgaaatgaaacacaaaatAGTTAATGTTAATCGTTTCTGAGAAAGTTTAA
TGGTAGTTTACAATCTGATCGAAAACGGGTTCTTATTGAATACAGTAGTA
TACTGTATACAGTATATTGATTTAAAGAGCGATCctgtaaatatatttta
aagcggtgaaaatttatttttttcaatacgtCCATTAAAAAGTGAATGGA
CTTTACCTATTAAAGTAGCGATAAATGTCTAAAACACTATATAAACTTTT
TAATGAGGTCAGATAGAATTTAGAATTTCCcactaaattttaatttttcc
cgccatccgccaaagtaaattcccgccaaaatttcttcccctgAAGGTAT
ATTAAGAATTTGCTTTTTGATAGGTTGCAAAGAGTGTGGGAAGCGAGAAT
TGATCAAGATTTCGAATAAACAATTGAAAgaagatgatgaagaagaaaat
ataaCCTACATTCACACGTGTGACAGTTGTGCGCATGTCATTGCTGAACA
TGAGTATACTTTCTCGGTGATTGATGAAGAGCAAGAATATTCGATGAACT
GTTTATTATGTGGAACAGGTGAAGACACTGTACAACAGTTTATCCCAAAA
GGTAGTGAAAGGTGAATGGGACACCTCAACTTGTCAATGTTCGCAAATTC
ACTTCAGAATGGTCATTTTTATTAAtgataaagttttttaaagcttttta
taaTATTGATTATTGTACCTGGGGTTGAATTTCAGCAAAATGTGATCGTT
AGAGAGACAAAAAGTACCCCctccataggcgtagcgagataccctgcaaa
atttatgagggagtgcagacgtttatgataTATTCactatcttttgataa
aacaaagacaataattacatgtcgtaaaaaccgctctcacccataaattt
tgcagggtatctcgctacgtcTATGCCTTCAGATACGTGTTTTCCTAAag
ctgacccttagagagattatTTTGACACTATGCTACTTTTGTAACCCTAG
AGAGACGTTGGAAAAGTAACAAACTGACTCAATAGCTATCTTTGCTTAAT
ACCCaggtattttttattgttttgatattgttttaatttatttacactac
atattttcaaaaaaactattACTCCCACTAGCAAAAAGAACTTTGCAATT
TCTCACAGTTTTGAATCATAAACAGAAGTTGCATTTGTATCATAAGTCTT
TTGTACCGAATTTGAGGCTTCTAAagatttcgaatctttcgagTTCTCAC
AGTTTTGAATCATAAACAGAAGTTGCATTTGTATCATAAGTCTTTTGTAC
CGAATTTGAGGCTTCTAAagatttcgaatctttcgagTGTTTACAACAAT
TCATTTGATTAGCCAAAATATACAACAAAGGGTCAGCAATTGCTTTTAGT
AGAATGAGAATCATTAAAACTCCATCTACACGTGCTCCACTGTACAATGA
AACAGCTTCTCCACCTTTGAAGATCATGATCAAAACAGGGGGTATGGTGA
ATAAGATATAAGCAACCATAATGGTAGACCAGAAGCGTGTAATCTCTTTC
TCATAATCACGTGATTCAGTTTTTGAACCACCAATCATACCAGCGTTTTG
TCCACTCAACACTTTTTTGGTAACACTGATGATGTAGATGCTGGATAGGA
TGAGGAAGAAGTCAGTAATGATCATTATGATGGAGATGATTTCCAATGCT
CCAGATCTGTTGATGAATATGGTTAACGTTGGCAATGCACTGATAACCCA
CACAAACACCAATGCTAGAACAGTTGATCTCTTTTTGACTTCACGATGTC
GGAAGGGAAATTTGAGAGCCATGAAGCGTTCCAATGATAATAGAATAACG
TGAAGTAACGAAGCAATCAAACTGAATAAGATGATAAACGCCAGGACTAA
GATCTTCTTGGAAGAGATTGGTTCACCTGCAGCAAAACAAGCGAACTCCA
CTATCACAGCCGCCCCTGACGTGAAATTTGTTAAACATAAACTGATAATG
ATTTGTTTATCGGGCGTCATCTTCCGCCCTCTTCTCGATGTCTTTGAGTT
TCTTCGTAACTTGTAGACCATCGTGAAGATGGCTGTGGTGTTTAAAAACA
CGATGGTGAATCCTTCCAATATGATGAAAATAACGAGTCCTTTGAATGTT
GCTTCTCCATCTTTGAACGTCATGTTGACTGGAGTGTTTTAAGcgaattt
ataaaatttgataattttcaactCTATAATATTTAAATAGAAATTTACAC
CATGTTATAATAAATTTATAAGTGATGAGACACacaccaatgaagtaaaa
gcccaaagggctagaagcgaatctcctaAGAAGGATTTGATACCActaaa
tcctacctaagttgcGTGGCCTTGAGCGGTCCGCGTGGTTTTAATACAAT
CACcagattgaaattaaaatttgccgcttgatttcaaaaaatatataact
cgaaaacaaagaaaccactAAATTCaatacgtcatcaaaaaaaaacgGCG
Tatatcttaaggcttcactttttcttttctgagaaaggttaaagattcgc
ttctagcccttcgggctttcaCTTCATTAATACATACCCGAGAAATCAAG
ACACAAGTGCCTCTTCGTCTCAATCGTAATGAACGAGAgatgtatttttt
ataaatgaGATTCAAATGAAGTTTCAAAAGCGACTCTCTTTCTTCTTTGG
TTTGTTTACCTTTATAAAActtcatcaaaacaaacaacctGAACGTCATC
AGTCAAAACCAccagaaagattttttcaacttatcACTACCTCATATCGA
CTTTATATGGTGATAAAAGTCAACATTACTCTTTTCCCTGCTCTGCTCTC
CAGTTACGTGATAAAAAATCTGTGATTTTTGTCGGTTGAGAAGTTTTCAC
CTTTCTATTCGCTGAATGCCCTTTTCATTATCACATACCCACGAGTCTTT
AATTCCGATTTGTAATATTCAACCGCTTGCAATTTTATGAATGTCTCTTG
Tgaatttattcatatttctaaatggaatgttttttttcgattttttattc
agtttttccaATATAACTTGTTATTCGCTGAAAAATTATACTAAAAATAT
CCAATTTCCACCAAATTAATTCGTTCATTCCTTTATCAAACCTGTAATTA
AGATATTACAACAAATTATCAAATTATTTATTGCTCCTCCTTCCTCCTTT
TAGGAAGCTAAAATATACAGTAGTTTTTCAATCTGTcgtaatatttttca
atgtttacattcgCCACGCGAAGCTTTCTCAAATTTGTAGAGTAAACATA
GATACACAT Coding sequence (CDS) from alignment at sc0000117_pilon:779575..784583+ >MSTRG.14219.2.p2 ID=MSTRG.14219.2.p2|Name=MSTRG.14219.2.p2|organism=Clytia hemisphaerica_ch_hm2_pilon|type=CDS|length=654bp|location=Sequence derived from alignment at sc0000117_pilon:779575..784583+ (Clytia hemisphaerica_ch_hm2_pilon)
ATGTGTAAAGAATGTGTTATAAATCCATTTCCAAATCGAAATAAAACATG
CTTGGAATCAGGATCCTACTTGATCAATTTTAAAGGTTGCAAAGAGTGTG
GGAAGCGAGAATTGATCAAGATTTCGAATAAACAATTGAAAgaagatgat
gaagaagaaaatataaCCTACATTCACACGTGTGACAGTTGTGCGCATGT
CATTGCTGAACATGAGTATACTTTCTCGGTGATTGATGAAGAGCAAGAAT
ATTCGATGAACTGTTTATTATGTGGAACAGGTGAAGACACTGTACAACAG
TTTATCCCAAAAGGTAGTGAAAGGTGAATGTGTAAAGAATGTGTTATAAA
TCCATTTCCAAATCGAAATAAAACATGCTTGGAATCAGGATCCTACTTGA
TCAATTTTAAAGGTTGCAAAGAGTGTGGGAAGCGAGAATTGATCAAGATT
TCGAATAAACAATTGAAAgaagatgatgaagaagaaaatataaCCTACAT
TCACACGTGTGACAGTTGTGCGCATGTCATTGCTGAACATGAGTATACTT
TCTCGGTGATTGATGAAGAGCAAGAATATTCGATGAACTGTTTATTATGT
GGAACAGGTGAAGACACTGTACAACAGTTTATCCCAAAAGGTAGTGAAAG
GTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000117_pilon | genome | sc0000117_pilon:779575..784583 + |
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